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PDB: 1139 results

7DYB
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BU of 7dyb by Molmil
Thermotoga maritima ferritin mutant-FLAL-L
Descriptor: FE (III) ION, Ferritin
Authors:Zhao, G, Zhang, X.
Deposit date:2021-01-20
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Protein interface redesign facilitates the transformation of nanocage building blocks to 1D and 2D nanomaterials.
Nat Commun, 12, 2021
7BEG
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BU of 7beg by Molmil
Structures of class I bacterial transcription complexes
Descriptor: Class I pacrA promoter non-template DNA, Class I pacrA promoter template DNA, DNA-directed RNA polymerase subunit alpha, ...
Authors:Ye, F.Z, Hao, M, Zhang, X.D.
Deposit date:2020-12-23
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structures of Class I and Class II Transcription Complexes Reveal the Molecular Basis of RamA-Dependent Transcription Activation.
Adv Sci, 9, 2022
4LDT
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BU of 4ldt by Molmil
The structure of h/ceOTUB1-ubiquitin aldehyde-UBCH5B~Ub
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Ubiquitin, ...
Authors:Wiener, R, DiBello, A.T, Lombardi, P.M, Guzzo, C.M, Zhang, X, Matunis, M.J, Wolberger, C.
Deposit date:2013-06-25
Release date:2013-08-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:E2 ubiquitin-conjugating enzymes regulate the deubiquitinating activity of OTUB1.
Nat.Struct.Mol.Biol., 20, 2013
3VT0
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BU of 3vt0 by Molmil
Crystal structure of Ct1,3Gal43A in complex with lactose
Descriptor: GLYCEROL, Ricin B lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-05-18
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
7YL3
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BU of 7yl3 by Molmil
Structure of hIAPP-TF-type1
Descriptor: Islet amyloid polypeptide
Authors:Li, D, Zhang, X, Wang, Y, Zhu, P.
Deposit date:2022-07-25
Release date:2022-12-28
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
7YL0
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BU of 7yl0 by Molmil
Structure of hIAPP-TF-type2
Descriptor: Islet amyloid polypeptide
Authors:Li, D, Zhang, X, Wang, Y, Zhu, P.
Deposit date:2022-07-25
Release date:2022-12-28
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
6LS0
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BU of 6ls0 by Molmil
rod-shaped crystal of TmFtn mutant-T4FY stimulited by PLL15
Descriptor: FE (III) ION, Ferritin
Authors:Zhao, G, Zhang, X.
Deposit date:2020-01-16
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:rod-shaped crystal of TmFtn mutant-T4FY stimulited by PLL15
To Be Published
7YL7
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BU of 7yl7 by Molmil
Structure of hIAPP-TF-type3
Descriptor: Islet amyloid polypeptide
Authors:Li, D, Zhang, X.
Deposit date:2022-07-25
Release date:2022-12-28
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
7YKW
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BU of 7ykw by Molmil
Structure of hIAPP fibril at 3.6 Angstroms resolution
Descriptor: Islet amyloid polypeptide
Authors:Li, D, Zhang, X, Wang, Y, Zhu, P.
Deposit date:2022-07-25
Release date:2023-01-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A new polymorphism of human amylin fibrils with similar protofilaments and a conserved core.
Iscience, 25, 2022
4PX7
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BU of 4px7 by Molmil
Crystal structure of lipid phosphatase E. coli PgpB
Descriptor: GLYCEROL, LAURYL DIMETHYLAMINE-N-OXIDE, Phosphatidylglycerophosphatase
Authors:Fan, J, Jiang, D, Zhao, Y, Zhang, X.C.
Deposit date:2014-03-22
Release date:2014-05-28
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of lipid phosphatase Escherichia coli phosphatidylglycerophosphate phosphatase B.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PEJ
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BU of 4pej by Molmil
Crystal structure of a computationally designed retro-aldolase, RA110.4 (Cys free)
Descriptor: Retro-aldolase
Authors:Bhabha, G, Zhang, X, Liu, Y, Ekiert, D.C.
Deposit date:2014-04-23
Release date:2015-04-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:De novo-designed enzymes as small-molecule-regulated fluorescence imaging tags and fluorescent reporters.
J.Am.Chem.Soc., 136, 2014
7DAW
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BU of 7daw by Molmil
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase
Descriptor: Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit, SULFATE ION
Authors:Xu, M, Zhang, X, Xu, L, Chen, S.
Deposit date:2020-10-18
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Re-discovery of PF-3845 as a new chemical scaffold inhibiting phenylalanyl-tRNA synthetase in Mycobacterium tuberculosis .
J.Biol.Chem., 2021
7DB8
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BU of 7db8 by Molmil
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound PF-3845
Descriptor: N-pyridin-3-yl-4-[[3-[5-(trifluoromethyl)pyridin-2-yl]oxyphenyl]methyl]piperidine-1-carboxamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit, ...
Authors:Xu, M, Zhang, X, Xu, L, Chen, S.
Deposit date:2020-10-19
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Re-discovery of PF-3845 as a new chemical scaffold inhibiting phenylalanyl-tRNA synthetase in Mycobacterium tuberculosis .
J.Biol.Chem., 2021
4JPN
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BU of 4jpn by Molmil
Bacteriophage phiX174 H protein residues 143-221
Descriptor: Minor spike protein H
Authors:Sun, L, Young, L.N, Boudko, S.B, Fokine, A, Zhang, X, Rossmann, M.G, Fane, B.A.
Deposit date:2013-03-19
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Icosahedral bacteriophage Phi X174 forms a tail for DNA transport during infection.
Nature, 505, 2014
7BP3
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BU of 7bp3 by Molmil
Cryo-EM structure of the human MCT2
Descriptor: Monocarboxylate transporter 2
Authors:Zhang, B, Jin, Q, Zhang, X, Guo, J, Ye, S.
Deposit date:2020-03-21
Release date:2020-06-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cooperative transport mechanism of human monocarboxylate transporter 2.
Nat Commun, 11, 2020
4M8M
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BU of 4m8m by Molmil
Crystal structure of the active dimer of zebrafish PlexinC1 cytoplasmic region
Descriptor: GCN4 coiled-coil fused zebrafish PlexinC1
Authors:Wang, Y, Pascoe, H.G, Zhang, X.
Deposit date:2013-08-13
Release date:2013-10-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.307 Å)
Cite:Structural basis for activation and non-canonical catalysis of the Rap GTPase activating protein domain of plexin.
Elife, 2, 2013
4OU1
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BU of 4ou1 by Molmil
Crystal structure of a computationally designed retro-aldolase covalently bound to folding probe 1 [(6-methoxynaphthalen-2-yl)(oxiran-2-yl)methanol]
Descriptor: (1S,2S)-1-(6-methoxynaphthalen-2-yl)propane-1,2-diol, BENZOIC ACID, PHOSPHATE ION, ...
Authors:Bhabha, G, Zhang, X, Ekiert, D.C.
Deposit date:2014-02-14
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Small molecule probes to quantify the functional fraction of a specific protein in a cell with minimal folding equilibrium shifts.
Proc.Natl.Acad.Sci.USA, 111, 2014
3QD7
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BU of 3qd7 by Molmil
Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli
Descriptor: Uncharacterized protein ydaL
Authors:Gui, W.J, Qu, Q.H, Chen, Y.Y, Wang, M, Zhang, X.E, Bi, L.J, Jiang, T.
Deposit date:2011-01-18
Release date:2011-06-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli.
J.Struct.Biol., 174, 2011
2DHR
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BU of 2dhr by Molmil
Whole cytosolic region of ATP-dependent metalloprotease FtsH (G399L)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FtsH
Authors:Suno, R, Niwa, H, Tsuchiya, D, Zhang, X, Yoshida, M, Morikawa, K.
Deposit date:2006-03-24
Release date:2006-06-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of the Whole Cytosolic Region of ATP-Dependent Protease FtsH
Mol.Cell, 22, 2006
1F3Y
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BU of 1f3y by Molmil
SOLUTION STRUCTURE OF THE NUDIX ENZYME DIADENOSINE TETRAPHOSPHATE HYDROLASE FROM LUPINUS ANGUSTIFOLIUS L.
Descriptor: DIADENOSINE 5',5'''-P1,P4-TETRAPHOSPHATE HYDROLASE
Authors:Swarbrick, J.D, Bashtannyk, T, Maksel, D, Zhang, X.R, Blackburn, G.M, Gayler, K.R, Gooley, P.R.
Deposit date:2000-06-06
Release date:2001-06-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The three-dimensional structure of the Nudix enzyme diadenosine tetraphosphate hydrolase from Lupinus angustifolius L.
J.Mol.Biol., 302, 2000
4EJY
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BU of 4ejy by Molmil
Structure of MBOgg1 in complex with high affinity DNA ligand
Descriptor: 3-Methyladenine DNA glycosylase, DNA (5'-D(*AP*GP*CP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA (5'-D(*T*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'), ...
Authors:Jiang, T, Yu, H.J, Bi, L.J, Zhang, X.E, Yang, M.Z.
Deposit date:2012-04-08
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of MBOgg1 in complex with two abasic DNA ligands
J.Struct.Biol., 181, 2013
7CCR
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BU of 7ccr by Molmil
Structure of the 2:2 cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (147-MER), Histone H2A type 1-B/E, ...
Authors:Cao, D, Han, X, Fan, X, Xu, R.M, Zhang, X.
Deposit date:2020-06-17
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural basis for nucleosome-mediated inhibition of cGAS activity.
Cell Res., 30, 2020
7CCQ
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BU of 7ccq by Molmil
Structure of the 1:1 cGAS-nucleosome complex
Descriptor: Cyclic GMP-AMP synthase, DNA (147-MER), Histone H2A type 1-B/E, ...
Authors:Cao, D, Han, X, Fan, X, Xu, R.M, Zhang, X.
Deposit date:2020-06-17
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for nucleosome-mediated inhibition of cGAS activity.
Cell Res., 30, 2020
4EJZ
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BU of 4ejz by Molmil
Structure of MBOgg1 in complex with low affinity DNA ligand
Descriptor: 3-Methyladenine DNA glycosylase, DNA (5'-D(*AP*GP*CP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA (5'-D(*T*GP*GP*TP*AP*GP*AP*CP*TP*TP*GP*GP*AP*CP*GP*C)-3')
Authors:Jiang, T, Yu, H.J, Bi, L.J, Zhang, X.E, Yang, M.Z.
Deposit date:2012-04-08
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structures of MBOgg1 in complex with two abasic DNA ligands
J.Struct.Biol., 181, 2013
6KD3
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BU of 6kd3 by Molmil
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
Descriptor: Uridine phosphorylase
Authors:Yang, C.C, Zhang, X.G.
Deposit date:2019-06-30
Release date:2019-12-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.764 Å)
Cite:Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete Phytophthora capsici.
To be published

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