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PDB: 102 件
6C6J
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Structure of glycolipid aGSA[8,P5p] in complex with mouse CD1d
分子名称: (5R,6S,7S)-5,6-dihydroxy-7-(octanoylamino)-N-(4-pentylphenyl)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)te trahydro-2H-pyran-2-yl]oxy}octanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Zajonc, D.M, Wang, J.
登録日2018-01-18
公開日2019-01-30
最終更新日2020-08-19
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
6C5M
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BU of 6c5m by Molmil
Structure of glycolipid aGSA[8,9] in complex with mouse CD1d
分子名称: (5R,6S,7S)-5,6-dihydroxy-N-nonyl-7-(octanoylamino)-8-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}octanamide (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zajonc, D.M, Wang, J.
登録日2018-01-16
公開日2019-01-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides.
J.Biol.Chem., 294, 2019
3JVG
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BU of 3jvg by Molmil
Crystal Structure of chicken CD1-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, CHLORIDE ION, ...
著者Dvir, H, Wang, J, Zajonc, D.M.
登録日2009-09-16
公開日2010-02-09
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for lipid-antigen recognition in avian immunity.
J.Immunol., 184, 2010
4U6H
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BU of 4u6h by Molmil
Vaccinia L1/M12B9-Fab complex
分子名称: Heavy chain of murine anti-vaccinia L1 IgG2a antibody M12B9, Light chain of murine anti-vaccinia L1 IgG2a antibody M12B9, Protein L1
著者Matho, M.H, Schlossman, A, Zajonc, D.M.
登録日2014-07-29
公開日2014-08-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Potent neutralization of vaccinia virus by divergent murine antibodies targeting a common site of vulnerability in l1 protein.
J.Virol., 88, 2014
5T2Q
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BU of 5t2q by Molmil
Unliganded Human HVEM at 1.9A in P 1 21 1
分子名称: Tumor necrosis factor receptor superfamily member 14
著者Nemcovicova, I, Zajonc, D.M.
登録日2016-08-24
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Unliganded Human HVEM at 1.9A in P 1 21 1
To Be Published
5T2R
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BU of 5t2r by Molmil
Unliganded Human HVEM at 2.1A in P 21 21 21
分子名称: Tumor necrosis factor receptor superfamily member 14
著者Nemcovicova, I, Zajonc, D.M.
登録日2016-08-24
公開日2018-10-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Unliganded Human HVEM at 2.1A in P 21 21 21
To Be Published
6OOR
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BU of 6oor by Molmil
Structure of 1B1 bound to mouse CD1d
分子名称: Antibody 1B1 Heavy chain, Antibody 1B1 Light chain, Antigen-presenting glycoprotein CD1d1, ...
著者Ying, G, Zajonc, D.M.
登録日2019-04-23
公開日2019-07-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis of NKT cell inhibition using the T-cell receptor-blocking anti-CD1d antibody 1B1.
J.Biol.Chem., 294, 2019
6O4Y
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BU of 6o4y by Molmil
Structure of HLA-A2:01 with peptide MM91
分子名称: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
著者Ying, G, Bitra, A, Zajonc, D.M.
登録日2019-03-01
公開日2020-01-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Anin silico-in vitroPipeline Identifying an HLA-A*02:01+KRAS G12V+Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
Front Immunol, 10, 2019
6O53
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BU of 6o53 by Molmil
Structure of HLA-A2:01 with peptide MM96
分子名称: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
著者Ying, G, Bitra, A, Zajonc, D.M.
登録日2019-03-01
公開日2020-01-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Anin silico-in vitroPipeline Identifying an HLA-A*02:01+KRAS G12V+Spliced Epitope Candidate for a Broad Tumor-Immune Response in Cancer Patients.
Front Immunol, 10, 2019
3QUZ
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BU of 3quz by Molmil
Structure of the mouse CD1d-NU-alpha-GalCer-iNKT TCR complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Li, Y, Girardi, E, Yu, E.D, Zajonc, D.M.
登録日2011-02-24
公開日2011-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis.
Embo J., 30, 2011
3QUY
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BU of 3quy by Molmil
Structure of the mouse CD1d-BnNH-GSL-1'-iNKT TCR complex
分子名称: (2S,3R,4S,5R,6S)-6-[(2S,3S,4R)-2-(hexacosanoylamino)-3,4-dihydroxy-octadecoxy]-3,4,5-trihydroxy-N-(phenylmethyl)oxane-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, Y, Girardi, E, Yu, E.D, Zajonc, D.M.
登録日2011-02-24
公開日2011-06-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis.
Embo J., 30, 2011
3QUX
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BU of 3qux by Molmil
Structure of the mouse CD1d-alpha-C-GalCer-iNKT TCR complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Li, Y, Girardi, E, Yu, E.D, Zajonc, D.M.
登録日2011-02-24
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis.
Embo J., 30, 2011
3RTQ
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BU of 3rtq by Molmil
Structure of the mouse CD1d-HS44-iNKT TCR complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Yu, E.D, Zajonc, D.M.
登録日2011-05-03
公開日2012-02-22
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional characterization of a novel nonglycosidic type I NKT agonist with immunomodulatory properties.
J.Immunol., 188, 2012
3RZC
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BU of 3rzc by Molmil
Structure of the self-antigen iGb3 bound to mouse CD1d and in complex with the iNKT TCR
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin, ...
著者Yu, E.D, Girardi, E, Wang, J, Zajonc, D.M.
登録日2011-05-11
公開日2011-08-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cutting Edge: Structural Basis for the Recognition of {beta}-Linked Glycolipid Antigens by Invariant NKT Cells.
J.Immunol., 187, 2011
3SO6
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BU of 3so6 by Molmil
Crystal structure of the LDL receptor tail in complex with autosomal recessive hypercholesterolemia PTB domain
分子名称: LDL receptor adaptor protein, Low-density lipoprotein receptor
著者Dvir, H, Zajonc, D.M.
登録日2011-06-29
公開日2012-04-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Atomic structure of the autosomal recessive hypercholesterolemia phosphotyrosine-binding domain in complex with the LDL-receptor tail.
Proc.Natl.Acad.Sci.USA, 109, 2012
5D9S
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BU of 5d9s by Molmil
Structure of HLA-A2:01 with the 11-mer peptide F11V
分子名称: 11-mer peptide F11V, Beta-2-microglobulin, GLYCEROL, ...
著者Remesh, S.G, Zajonc, D.M.
登録日2015-08-19
公開日2016-07-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.
Elife, 5, 2016
5EFI
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BU of 5efi by Molmil
Crystal structure of mouse CD1d in complex with the p99p lipopeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Girardi, E, Wang, J, Zajonc, D.M.
登録日2015-10-23
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of an alpha-Helical Peptide and Lipopeptide Bound to the Nonclassical Major Histocompatibility Complex (MHC) Class I Molecule CD1d.
J.Biol.Chem., 291, 2016
5EOR
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BU of 5eor by Molmil
Structure of the murine antibody Fab 8E3 bound to the vaccinia virus A27 peptide 101-110
分子名称: Protein A27, SODIUM ION, anti vaccinia virus A27 antibody 8E3 heavy chain, ...
著者Matho, M.H, Zajonc, D.M.
登録日2015-11-10
公開日2016-03-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Linear Epitopes in Vaccinia Virus A27 Are Targets of Protective Antibodies Induced by Vaccination against Smallpox.
J.Virol., 90, 2016
5ENW
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BU of 5enw by Molmil
Structure of HLA-A2:01 with peptide G9L
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Remesh, S.G, Zajonc, D.M.
登録日2015-11-09
公開日2016-11-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT.
J. Biol. Chem., 292, 2017
5EOQ
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BU of 5eoq by Molmil
Structure of the murine Fab 1G6 bound to the vaccinia virus A27 peptide 31-40
分子名称: Anti vaccinia virus A27 antibody Fab 1G6 heavy chain, Anti vaccinia virus A27 antibody Fab 1G6 light chain, Protein A27
著者Matho, M.H, Zajonc, D.M.
登録日2015-11-10
公開日2016-03-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Linear Epitopes in Vaccinia Virus A27 Are Targets of Protective Antibodies Induced by Vaccination against Smallpox.
J.Virol., 90, 2016
2FIK
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BU of 2fik by Molmil
Structure of a microbial glycosphingolipid bound to mouse CD1d
分子名称: (2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wu, D, Zajonc, D.M.
登録日2005-12-29
公開日2006-03-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design of natural killer T cell activators: structure and function of a microbial glycosphingolipid bound to mouse CD1d.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3TA3
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BU of 3ta3 by Molmil
Structure of the mouse CD1d-Glc-DAG-s2-iNKT TCR complex
分子名称: (2S)-1-(alpha-D-glucopyranosyloxy)-3-(hexadecanoyloxy)propan-2-yl (11Z)-octadec-11-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Yu, E.D, Zajonc, D.M.
登録日2011-08-03
公開日2011-11-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Unique Interplay between Sugar and Lipid in Determining the Antigenic Potency of Bacterial Antigens for NKT Cells.
Plos Biol., 9, 2011
3T1F
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BU of 3t1f by Molmil
Crystal structure of the mouse CD1d-Glc-DAG-s2 complex
分子名称: (2S)-1-(alpha-D-glucopyranosyloxy)-3-(hexadecanoyloxy)propan-2-yl (11Z)-octadec-11-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Zajonc, D.M.
登録日2011-07-21
公開日2011-09-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Invariant natural killer T cells recognize glycolipids from pathogenic Gram-positive bacteria.
Nat.Immunol., 12, 2011
3UBX
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Crystal structure of the mouse CD1d-C20:2-aGalCer-L363 mAb Fab complex
分子名称: (11Z,14Z)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]icosa-11,14-dienamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yu, E.D, Zajonc, D.M.
登録日2011-10-25
公開日2011-11-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for the recognition of C20:2-alpha GalCer by the invariant natural killer T cell receptor-like antibody L363.
J.Biol.Chem., 287, 2012
3TVM
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Structure of the mouse CD1d-SMC124-iNKT TCR complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Girardi, E, Li, Y, Zajonc, D.M.
登録日2011-09-20
公開日2012-02-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Glycolipids that Elicit IFN-gama-Biased Responses from Natural Killer T Cells
Chem.Biol., 18, 2011

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