6C6J

Structure of glycolipid aGSA[8,P5p] in complex with mouse CD1d

Summary for 6C6J

Entry DOI	10.2210/pdb6c6j/pdb
Descriptor	Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... (7 entities in total)
Functional Keywords	glycolipid-antigen presentation, mhc-fold, ig-fold, immune system
Biological source	Mus musculus (Mouse) More
Total number of polymer chains	2
Total formula weight	46576.47
Authors	Zajonc, D.M.,Wang, J. (deposition date: 2018-01-18, release date: 2019-01-30, Last modification date: 2020-08-19)
Primary citation	Wang, J.,Guillaume, J.,Janssens, J.,Remesh, S.G.,Ying, G.,Bitra, A.,Van Calenbergh, S.,Zajonc, D.M. A molecular switch in mouse CD1d modulates natural killer T cell activation by alpha-galactosylsphingamides. J.Biol.Chem., 294:14345-14356, 2019 Cited by PubMed: 31391251 DOI: 10.1074/jbc.RA119.009963 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (1.79 Å)

Structure validation