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PDB: 129 件

5LI0
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70S ribosome from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Khusainov, I, Vicens, Q, Bochler, A, Grosse, F, Myasnikov, A, Menetret, J.F, Chicher, J, Marzi, S, Romby, P, Yusupova, G, Yusupov, M, Hashem, Y.
登録日2016-07-13
公開日2016-12-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the 70S ribosome from human pathogen Staphylococcus aureus.
Nucleic Acids Res., 44, 2016
2VAZ
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Model of the S15-mRNA complex fitted into the cryo-EM map of the 70S entrapment complex.
分子名称: 30S RIBOSOMAL PROTEIN S15, RPSO MRNA OPERATOR
著者Marzi, S, Myasnikov, A.G, Serganov, A, Ehresmann, C, Romby, P, Yusupov, M, Klaholz, B.P.
登録日2007-09-05
公開日2007-10-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structured Mrnas Regulate Translation Initiation by Binding to the Platform of the Ribosome.
Cell(Cambridge,Mass.), 130, 2007
7BGD
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Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)
分子名称: 16S ribosomal RNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Belinite, M, Khusainov, I, Marzi, S, Romby, P, Yusupov, M, Hashem, Y.
登録日2021-01-06
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus
Front Mol Biosci, 8, 2021
7BGE
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Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S13, ...
著者Belinite, M, Khusainov, I, Marzi, S, Romby, P, Yusupov, M, Hashem, Y.
登録日2021-01-06
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus
Front Mol Biosci, 8, 2021
5I4L
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Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Prokhorova, I.V, Yusupova, G, Yusupov, M.
登録日2016-02-12
公開日2016-06-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Amicoumacin A induces cancer cell death by targeting the eukaryotic ribosome.
Sci Rep, 6, 2016
7KWG
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Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Belinite, M, Khusainov, I, Marzi, S, Romby, P, Yusupov, M, Hashem, Y.
登録日2020-11-30
公開日2021-01-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus .
Front Mol Biosci, 8, 2021
6YE5
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Structure of ribosomal binding factor A RbfA of Staphylococcus aureus bacterium by NMR
分子名称: Ribosome-binding factor A
著者Blokhin, D.S, Usachev, K.S, Bikmullin, A.G, Nurullina, L, Garaeva, N, Validov, S, Klochkov, V, Aganov, A, Khusainov, I, Yusupov, M.
登録日2020-03-24
公開日2021-03-31
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of ribosomal binding factor A RbfA of Staphylococcus aureus bacterium by NMR
To Be Published
7Q0R
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Structure of the Candida albicans 80S ribosome in complex with blasticidin s
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
著者Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-16
公開日2022-05-25
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q0P
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Structure of the Candida albicans 80S ribosome in complex with anisomycin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
著者Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-15
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7PZY
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Structure of the vacant Candida albicans 80S ribosome
分子名称: 1,4-DIAMINOBUTANE, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-13
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q0F
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Structure of Candida albicans 80S ribosome in complex with phyllanthoside
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-14
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q08
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Structure of Candida albicans 80S ribosome in complex with cycloheximide
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-14
公開日2022-05-25
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
6QBZ
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Solution structure of the N-terminal domain of the Staphylococcus aureus Hibernation Promoting Factor
分子名称: Ribosome hibernation promoting factor
著者Usachev, K.S, Validov, S.Z, Khusainov, I.S, Klochkov, V.V, Aganov, A.V, Yusupov, M.M.
登録日2018-12-25
公開日2019-06-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the N-terminal domain of the Staphylococcus aureus hibernation promoting factor.
J.Biomol.Nmr, 73, 2019
6QNR
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70S ribosome elongation complex (EC) with experimentally assigned potassium ions
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Khusainov, I, Yusupov, M, Yusupova, G.
登録日2019-02-11
公開日2019-06-19
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction.
Nat Commun, 10, 2019
8BYV
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Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Bikmullin, A.G, Fatkhullin, B, Stetsenko, A, Guskov, A, Yusupov, M.
登録日2022-12-14
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structural characteristic of RbfA from S. aureus
To Be Published
8C3A
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Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
分子名称: 18S, 25S, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Kolosova, O, Zgadzay, Y, Yusupov, M.
登録日2022-12-23
公開日2024-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献New crystal system to promote screening for new eukaryotic inhibitors
To Be Published
6QNQ
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70S ribosome initiation complex (IC) with experimentally assigned potassium ions
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Khusainov, I, Yusupov, M, Yusupova, G.
登録日2019-02-11
公開日2019-06-19
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Importance of potassium ions for ribosome structure and function revealed by long-wavelength X-ray diffraction.
Nat Commun, 10, 2019
5TBW
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Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Konst, Z.A, Szklarski, A.R, Pellegrino, S, Michalak, S.E, Meyer, M, Zanette, C, Cencic, R, Nam, S, Horne, D.A, Pelletier, J, Mobley, D.L, Yusupova, G, Yusupov, M, Vanderwal, C.D.
登録日2016-09-13
公開日2017-07-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Synthesis facilitates an understanding of the structural basis for translation inhibition by the lissoclimides.
Nat Chem, 9, 2017
6RJI
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X-ray structure of the elongation factor P of S. aureus
分子名称: Elongation factor P
著者Fatkhullin, B.F, Golubev, A.A, Gabdulkhakov, A.G, Khusainov, I.S, Validov, S.Z, Usachev, K.S, Yusupova, G, Yusupov, M.M.
登録日2019-04-27
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献NMR and crystallographic structural studies of the Elongation factor P from Staphylococcus aureus.
Eur.Biophys.J., 49, 2020
1Y99
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HIV-1 subtype A DIS RNA duplex
分子名称: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION
著者Ennifar, E, Yusupov, M, Walter, P, Marquet, R, Ehresmann, B, Ehresmann, C, Dumas, P.
登録日2004-12-15
公開日2004-12-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges
Structure Fold.Des., 7, 1999
1JGO
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The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGO, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
分子名称: 30S 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Yusupova, G.Z, Yusupov, M.M, Cate, J.H.D, Noller, H.F.
登録日2001-06-26
公開日2001-07-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (5.6 Å)
主引用文献The path of messenger RNA through the ribosome.
Cell(Cambridge,Mass.), 106, 2001
1JGQ
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The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGQ, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
分子名称: 30S 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Yusupova, G.Z, Yusupov, M.M, Cate, J.H.D, Noller, H.F.
登録日2001-06-26
公開日2001-07-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献The path of messenger RNA through the ribosome.
Cell(Cambridge,Mass.), 106, 2001
1JGP
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The Path of Messenger RNA Through the Ribosome. THIS FILE, 1JGP, CONTAINS THE 30S RIBOSOME SUBUNIT, THREE TRNA, AND MRNA MOLECULES. 50S RIBOSOME SUBUNIT IS IN THE FILE 1GIY
分子名称: 30S 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Yusupova, G.Z, Yusupov, M.M, Cate, J.H.D, Noller, H.F.
登録日2001-06-26
公開日2001-07-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (7 Å)
主引用文献The path of messenger RNA through the ribosome.
Cell(Cambridge,Mass.), 106, 2001
462D
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CRYSTAL STRUCTURE OF THE HIV-1 GENOMIC RNA DIMERIZATION INITIATION SITE
分子名称: MAGNESIUM ION, RNA (5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G) -3')
著者Ennifar, E, Yusupov, M, Walter, P, Marquet, R, Ehresmann, C, Ehresmann, B, Dumas, P.
登録日1999-03-18
公開日1999-12-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges.
Structure Fold.Des., 7, 1999
6SJ5
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Crystal structure of the uL14-RsfS complex from Staphylococcus aureus
分子名称: 50S ribosomal protein L14, ACETIC ACID, PHOSPHATE ION, ...
著者Fatkhullin, B, Gabdulkhakov, A, Yusupova, G, Yusupov, M.
登録日2019-08-12
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.26686549 Å)
主引用文献Mechanism of ribosome shutdown by RsfS in Staphylococcus aureus revealed by integrative structural biology approach.
Nat Commun, 11, 2020

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