1Y99

HIV-1 subtype A DIS RNA duplex

Summary for 1Y99

Related462D 1JJN 1K9W
Descriptor5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION (3 entities in total)
Functional Keywordshiv-1, rna, bulge, magnesium
Total number of polymer chains2
Total molecular weight14975.08
Authors
Ennifar, E.,Yusupov, M.,Walter, P.,Marquet, R.,Ehresmann, B.,Ehresmann, C.,Dumas, P. (deposition date: 2004-12-15, release date: 2004-12-21, Last modification date: 2011-07-13)
Primary citation
Ennifar, E.,Yusupov, M.,Walter, P.,Marquet, R.,Ehresmann, B.,Ehresmann, C.,Dumas, P.
The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges
Structure Fold.Des., 7:1439-1449, 1999
PubMed: 10574792 (PDB entries with the same primary citation)
DOI: 10.1016/S0969-2126(00)80033-7
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.4 Å)
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Structure validation

RfreeClashscoreRSRZ outliersRNA backbone0.22862.2%0.86MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1y99
no rotation
Molmil generated image of 1y99
rotated about x axis by 90°
Molmil generated image of 1y99
rotated about y axis by 90°