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PDB: 164 results

6IRR
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BU of 6irr by Molmil
Solution structure of DISC1/ATF4 complex
Descriptor: Disrupted in schizophrenia 1 homolog,Cyclic AMP-dependent transcription factor ATF-4
Authors:Ye, F, Yu, C, Zhang, M.
Deposit date:2018-11-14
Release date:2019-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural interaction between DISC1 and ATF4 underlying transcriptional and synaptic dysregulation in an iPSC model of mental disorders.
Mol. Psychiatry, 2019
2X44
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BU of 2x44 by Molmil
Structure of a strand-swapped dimeric form of CTLA-4
Descriptor: CYTOTOXIC T-LYMPHOCYTE PROTEIN 4
Authors:Sonnen, A.F.-P, Yu, C, Evans, E.J, Stuart, D.I, Davis, S.J, Gilbert, R.J.C.
Deposit date:2010-01-28
Release date:2010-04-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Domain Metastability: A Molecular Basis for Immunoglobulin Deposition?
J.Mol.Biol., 399, 2010
5KUP
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BU of 5kup by Molmil
Bruton's tyrosine kinase (BTK) with pyridazinone compound 9
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 6-~{tert}-butyl-8-fluoranyl-2-[3-(hydroxymethyl)-4-[1-methyl-6-oxidanylidene-5-(pyrimidin-4-ylamino)pyridin-3-yl]pyridin-2-yl]phthalazin-1-one, GLYCEROL, ...
Authors:Eigenbrot, C, Yu, C.
Deposit date:2016-07-13
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.389 Å)
Cite:Battling Btk Mutants With Noncovalent Inhibitors That Overcome Cys481 and Thr474 Mutations.
Acs Chem.Biol., 11, 2016
1X32
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BU of 1x32 by Molmil
Three Dimensional Solution Structure of the Chromo1 domain of cpSRP43
Descriptor: chloroplast signal recognition particle component
Authors:Sivaraja, V, Kumar, T.K, Henry, R, Yu, C.
Deposit date:2005-04-28
Release date:2005-09-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structures of the chromodomains of cpSRP43
J.Biol.Chem., 280, 2005
1NTM
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BU of 1ntm by Molmil
Crystal Structure of Mitochondrial Cytochrome bc1 Complex at 2.4 Angstrom
Descriptor: Cytochrome b, FE2/S2 (INORGANIC) CLUSTER, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gao, X, Wen, X, Esser, L, Quinn, B, Yu, L, Yu, C, Xia, D.
Deposit date:2003-01-30
Release date:2003-10-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the quinone reduction in the bc(1) complex: a comparative analysis of crystal structures of mitochondrial cytochrome bc(1) with bound substrate and inhibitors at the Q(i) site
Biochemistry, 42, 2003
1KBS
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BU of 1kbs by Molmil
SOLUTION STRUCTURE OF CARDIOTOXIN IV, NMR, 1 STRUCTURE
Descriptor: CTX IV
Authors:Jeng, J.Y, Kumar, T.K.S, Jayaraman, G, Yu, C.
Deposit date:1996-07-22
Release date:1997-07-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Comparison of the hemolytic activity and solution structures of two snake venom cardiotoxin analogues which only differ in their N-terminal amino acid.
Biochemistry, 36, 1997
1KBT
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BU of 1kbt by Molmil
SOLUTION STRUCTURE OF CARDIOTOXIN IV, NMR, 12 STRUCTURES
Descriptor: CTX IV
Authors:Jeng, J.Y, Kumar, T.K.S, Jayaraman, G, Yu, C.
Deposit date:1996-07-22
Release date:1997-07-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Comparison of the hemolytic activity and solution structures of two snake venom cardiotoxin analogues which only differ in their N-terminal amino acid.
Biochemistry, 36, 1997
4RX5
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BU of 4rx5 by Molmil
Bruton's tyrosine kinase (BTK) with pyridazinone compound 23
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, GLYCEROL, N-(6-fluoro-2-methyl-3-{5-[(5-methyl-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazin-2-yl)amino]-6-oxo-1,6-dihydropyridazin-3-yl}phenyl)-1-benzothiophene-2-carboxamide, ...
Authors:Eigenbrot, C, Yu, C.
Deposit date:2014-12-08
Release date:2015-12-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.356 Å)
Cite:Discovery of highly potent and selective Bruton's tyrosine kinase inhibitors: Pyridazinone analogs with improved metabolic stability.
Bioorg.Med.Chem.Lett., 26, 2016
1TXA
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BU of 1txa by Molmil
SOLUTION NMR STRUCTURE OF TOXIN B, A LONG NEUROTOXIN FROM THE VENOM OF THE KING COBRA, MINIMIZED AVERAGE STRUCTURE
Descriptor: TOXIN B
Authors:Peng, S.-S, Kumar, T.K.S, Jayaraman, G, Chang, C.-C, Yu, C.
Deposit date:1996-07-20
Release date:1997-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of toxin b, a long neurotoxin from the venom of the king cobra (Ophiophagus hannah).
J.Biol.Chem., 272, 1997
1X3P
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BU of 1x3p by Molmil
3D solution structure of the Chromo-3 domain of cpSRP43
Descriptor: cpSRP43
Authors:Leena, P.S.T, Kumar, T.K.S, Sivaraja, V, Henry, R, Yu, C.
Deposit date:2005-05-10
Release date:2005-09-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:3D Solution Structure of the Chromo-3 domain of cpSRP43
To be Published
1WVZ
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BU of 1wvz by Molmil
Solution Structure of the D2 Domain of the Fibroblast Growth Factor
Descriptor: Fibroblast growth factor receptor 2
Authors:Hung, K.W, Kumar, T.K.S, Yu, C.
Deposit date:2004-12-28
Release date:2005-12-28
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of the D2 Domain of the Fibroblast Growth Factor
To be Published
6O8U
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BU of 6o8u by Molmil
Crystal structure of IRAK4 in complex with compound 23
Descriptor: GLYCEROL, Interleukin-1 receptor-associated kinase 4, N-[2,2-dimethyl-6-(morpholin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]pyrazolo[1,5-a]pyrimidine-3-carboxamide, ...
Authors:Kiefer, J.R, Yu, C, Drobnick, J, Bryan, M.C, Lupardus, P.J.
Deposit date:2019-03-12
Release date:2019-05-22
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.
J.Med.Chem., 62, 2019
1X3Q
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BU of 1x3q by Molmil
3D Solution Structure of the Chromo-2 Domain of cpSRP43
Descriptor: cpSRP43
Authors:Sivaraja, V, Kumar, T.K.S, Henry, R, Yu, C.
Deposit date:2005-05-10
Release date:2005-09-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:3D Solution Structure of the Chromo-2 domain of cpSRP43
To be Published
1TXB
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BU of 1txb by Molmil
SOLUTION NMR STRUCTURE OF TOXIN B, A LONG NEUROTOXIN FROM THE VENOM OF THE KING COBRA, 10 STRUCTURES
Descriptor: TOXIN B
Authors:Peng, S.-S, Kumar, T.K.S, Jayaraman, G, Chang, C.-C, Yu, C.
Deposit date:1996-07-20
Release date:1997-10-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of toxin b, a long neurotoxin from the venom of the king cobra (Ophiophagus hannah).
J.Biol.Chem., 272, 1997
2OQ3
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BU of 2oq3 by Molmil
Solution Structure of the mannitol- specific cryptic phosphotransferase enzyme IIA CmtB from Escherichia coli
Descriptor: Mannitol-specific cryptic phosphotransferase enzyme IIA component
Authors:Jin, C, Yu, C.
Deposit date:2007-01-31
Release date:2007-09-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the cryptic mannitol-specific phosphotransferase enzyme IIA CmtB from Escherichia coli
Biochem.Biophys.Res.Commun., 362, 2007
6NSQ
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BU of 6nsq by Molmil
Crystal structure of BRAF kinase domain bound to the inhibitor 2l
Descriptor: 5-[(4-amino-1-ethyl-1H-pyrazolo[3,4-d]pyrimidin-3-yl)ethynyl]-N-(4-chlorophenyl)-6-methylisoquinolin-1-amine, Serine/threonine-protein kinase B-raf
Authors:Maisonneuve, P, Kurinov, I, Assadieskandar, A, Yu, C, Zhang, C, Sicheri, F.
Deposit date:2019-01-25
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Rigidification Dramatically Improves Inhibitor Selectivity for RAF Kinases.
Acs Med.Chem.Lett., 10, 2019
5YI4
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BU of 5yi4 by Molmil
Solution Structure of the DISC1/Ndel1 complex
Descriptor: Disrupted in schizophrenia 1 homolog,Nuclear distribution protein nudE-like 1
Authors:Ye, F, Yu, C, Yu, C, Zhang, M.
Deposit date:2017-10-02
Release date:2017-11-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:DISC1 Regulates Neurogenesis via Modulating Kinetochore Attachment of Ndel1/Nde1 during Mitosis.
Neuron, 96, 2017
6XE4
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BU of 6xe4 by Molmil
BTK Fluorocyclopropyl amide inhibitor, Compound 25
Descriptor: (1S,2S)-N-[2'-(6-tert-butyl-8-fluoro-1-oxophthalazin-2(1H)-yl)-3'-(hydroxymethyl)-1-methyl-6-oxo[1,6-dihydro[3,4'-bipyridine]]-5-yl]-2-fluorocyclopropane-1-carboxamide, SULFATE ION, Tyrosine-protein kinase BTK
Authors:Kiefer, J.R, Crawford, J.J, Lee, W, Eigenbrot, C, Yu, C.
Deposit date:2020-06-11
Release date:2020-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stereochemical Differences in Fluorocyclopropyl Amides Enable Tuning of Btk Inhibition and Off-Target Activity.
Acs Med.Chem.Lett., 11, 2020
2AL3
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BU of 2al3 by Molmil
Solution structure and backbone dynamics of an N-terminal ubiquitin-like domain in the GLUT4-tethering protein, TUG
Descriptor: TUG long isoform
Authors:Tettamanzi, M.C, Yu, C, Bogan, J.S, Hodsdon, M.E.
Deposit date:2005-08-04
Release date:2006-03-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of an N-terminal ubiquitin-like domain in the GLUT4-regulating protein, TUG.
Protein Sci., 15, 2006
2B7D
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BU of 2b7d by Molmil
Factor VIIa Inhibitors: Chemical Optimization, Preclinical Pharmacokinetics, Pharmacodynamics, and Efficacy in a Baboon Thrombosis Model
Descriptor: (2R)-2-[5-(5-CARBAMIMIDOYL-1H-BENZOIMIDAZOL-2-YL)-6,2'-DIHYDROXY-5'-UREIDOMETHYL-BIPHENYL-3-YL]-SUCCINIC ACID, Coagulation factor VII, Tissue factor
Authors:Young, W.B, Mordenti, J, Torkelson, S, Shrader, W.D, Kolesnikov, A, Rai, R, Liu, L, Hu, H, Leahy, E.M, Green, M.J, Sprengeler, P.A, Katz, B.A, Yu, C, Janc, J.W, Elrod, K.C, Marzec, U.M, Hanson, S.R.
Deposit date:2005-10-04
Release date:2006-02-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Factor VIIa inhibitors: Chemical optimization, preclinical pharmacokinetics, pharmacodynamics, and efficacy in an arterial baboon thrombosis model.
Bioorg.Med.Chem.Lett., 16, 2006
2BMQ
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BU of 2bmq by Molmil
The Crystal Structure of Nitrobenzene Dioxygenase in complex with nitrobenzene
Descriptor: 1,2-ETHANEDIOL, ETHANOL, FE (III) ION, ...
Authors:Friemann, R, Ivkovic-Jensen, M.M, Lessner, D.J, Yu, C, Gibson, D.T, Parales, R.E, Eklund, H, Ramaswamy, S.
Deposit date:2005-03-15
Release date:2005-05-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase.
J. Mol. Biol., 348, 2005
2BMO
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BU of 2bmo by Molmil
The Crystal Structure of Nitrobenzene Dioxygenase
Descriptor: 1,2-ETHANEDIOL, ETHANOL, FE (III) ION, ...
Authors:Friemann, R, Ivkovic-Jensen, M.M, Lessner, D.J, Yu, C, Gibson, D.T, Parales, R.E, Eklund, H, Ramaswamy, S.
Deposit date:2005-03-15
Release date:2005-05-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase.
J. Mol. Biol., 348, 2005
2BMR
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BU of 2bmr by Molmil
The Crystal Structure of Nitrobenzene Dioxygenase in complex with 3- nitrotoluene
Descriptor: 1,2-ETHANEDIOL, 3-NITROTOLUENE, ETHANOL, ...
Authors:Friemann, R, Ivkovic-Jensen, M.M, Lessner, D.J, Yu, C, Gibson, D.T, Parales, R.E, Eklund, H, Ramaswamy, S.
Deposit date:2005-03-15
Release date:2005-05-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase.
J. Mol. Biol., 348, 2005
2CXJ
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BU of 2cxj by Molmil
3D Solution Structure of S100A13
Descriptor: S100 calcium-binding protein A13
Authors:Vaithiyalingam, S, Kumar, T.K.S, Yu, C.
Deposit date:2005-06-30
Release date:2006-06-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-Dimensional Solution Structure of S100A13
To be Published
6XNN
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BU of 6xnn by Molmil
Crystal Structure of Mouse STING CTD complex with SR-717.
Descriptor: 4,5-difluoro-2-{[6-(1H-imidazol-1-yl)pyridazine-3-carbonyl]amino}benzoic acid, Stimulator of interferon genes protein
Authors:Chin, E.N, Yu, C, Wolan, D.W, Petrassi, H.M, Lairson, L.L.
Deposit date:2020-07-03
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Antitumor activity of a systemic STING-activating non-nucleotide cGAMP mimetic.
Science, 369, 2020

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