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PDB: 161 results

6O9D
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BU of 6o9d by Molmil
Structure of the IRAK4 kinase domain with compound 5
Descriptor: Interleukin-1 receptor-associated kinase 4, N-{7-[4-(aminomethyl)piperidin-1-yl]quinolin-6-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide
Authors:Yu, C, Drobnick, J, Bryan, M.C, Kiefer, J, Lupardus, P.J.
Deposit date:2019-03-13
Release date:2019-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.
J.Med.Chem., 62, 2019
7UVF
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BU of 7uvf by Molmil
Crystal structure of ZED8 Fab complex with CD8 alpha
Descriptor: CHLORIDE ION, GLYCEROL, Immunoglobulin heavy chain, ...
Authors:Yu, C, Davies, C, Koerber, J.T, Williams, S.
Deposit date:2022-05-01
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Preclinical development of ZED8, an 89 Zr immuno-PET reagent for monitoring tumor CD8 status in patients undergoing cancer immunotherapy.
Eur J Nucl Med Mol Imaging, 50, 2023
6O94
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BU of 6o94 by Molmil
Structure of the IRAK4 kinase domain with compound 17
Descriptor: CALCIUM ION, Interleukin-1 receptor-associated kinase 4, N-{5-[4-(hydroxymethyl)piperidin-1-yl]-1-methyl-2-(morpholin-4-yl)-1H-benzimidazol-6-yl}pyrazolo[1,5-a]pyrimidine-3-carboxamide
Authors:Yu, C, Drobnick, J, Bryan, M.C, Kiefer, J, Lupardus, P.J.
Deposit date:2019-03-13
Release date:2019-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.
J.Med.Chem., 62, 2019
6O95
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Structure of the IRAK4 kinase domain with compound 41
Descriptor: Interleukin-1 receptor-associated kinase 4, N-[(2R)-2-(hydroxymethyl)-2-methyl-6-(morpholin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]pyrazolo[1,5-a]pyrimidine-3-carboxamide, SULFATE ION
Authors:Yu, C, Drobnick, J, Bryan, M.C, Kiefer, J, Lupardus, P.J.
Deposit date:2019-03-13
Release date:2019-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Development of Potent and Selective Pyrazolopyrimidine IRAK4 Inhibitors.
J.Med.Chem., 62, 2019
1COE
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BU of 1coe by Molmil
SOLUTION CONFORMATION OF COBROTOXIN: A NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING STUDY
Descriptor: COBROTOXIN
Authors:Yu, C, Bhaskaran, R, Yang, C.C.
Deposit date:1994-05-11
Release date:1995-01-26
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution conformation of cobrotoxin: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
Biochemistry, 32, 1993
1COD
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BU of 1cod by Molmil
SOLUTION CONFORMATION OF COBROTOXIN: A NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING STUDY
Descriptor: COBROTOXIN
Authors:Yu, C, Bhaskaran, R, Yang, C.C.
Deposit date:1994-05-11
Release date:1995-01-26
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution conformation of cobrotoxin: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
Biochemistry, 32, 1993
2L18
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BU of 2l18 by Molmil
An arsenate reductase in the phosphate binding state
Descriptor: Arsenate reductase
Authors:Yu, C, Xia, B, Jin, C.
Deposit date:2010-07-26
Release date:2011-04-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:(1)H, (13)C and (15)N resonance assignments of the arsenate reductase from Synechocystis sp. strain PCC 6803
Biomol.Nmr Assign., 5, 2011
2L19
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BU of 2l19 by Molmil
An arsenate reductase in the intermediate state
Descriptor: Arsenate reductase
Authors:Yu, C, Xia, B, Jin, C.
Deposit date:2010-07-26
Release date:2011-04-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:(1)H, (13)C and (15)N resonance assignments of the arsenate reductase from Synechocystis sp. strain PCC 6803
Biomol.Nmr Assign., 5, 2011
2L17
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BU of 2l17 by Molmil
An arsenate reductase in the reduced state
Descriptor: Arsenate reductase
Authors:Yu, C, Xia, B, Jin, C.
Deposit date:2010-07-26
Release date:2011-04-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:(1)H, (13)C and (15)N resonance assignments of the arsenate reductase from Synechocystis sp. strain PCC 6803
Biomol.Nmr Assign., 5, 2011
3H8D
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BU of 3h8d by Molmil
Crystal structure of Myosin VI in complex with Dab2 peptide
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Disabled homolog 2, ...
Authors:Yu, C, Feng, W, Wei, Z, Zhang, M.
Deposit date:2009-04-29
Release date:2009-09-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Myosin VI undergoes cargo-mediated dimerization
Cell(Cambridge,Mass.), 138, 2009
3OSK
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BU of 3osk by Molmil
Crystal structure of human CTLA-4 apo homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytotoxic T-lymphocyte protein 4, GLYCEROL
Authors:Yu, C, Sonnen, A.F.-P, Ikemizu, S, Stuart, D.I, Gilbert, R.J.C, Davis, S.J.
Deposit date:2010-09-09
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rigid-body ligand recognition drives cytotoxic T-lymphocyte antigen 4 (CTLA-4) receptor triggering
J.Biol.Chem., 286, 2011
2K4A
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BU of 2k4a by Molmil
FGF-1-C2A binary complex structure: a key component in the fibroblast growthfactor non-classical pathway
Descriptor: Heparin-binding growth factor 1, Synaptotagmin-1
Authors:Yu, C, Mohan, S.K.
Deposit date:2008-06-02
Release date:2009-06-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:FGF-1-C2A binary complex structure: key component in the acidic fibroblast growth factor release
To be Published
2N7Y
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BU of 2n7y by Molmil
NMR structure of metal-binding domain 1 of ATP7B
Descriptor: Copper-transporting ATPase 2
Authors:Yu, C, Lee, W, Dmitriev, O.
Deposit date:2015-09-27
Release date:2016-09-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of Metal Binding Domain 1 of the Copper Transporter ATP7B Reveals Mechanism of a Singular Wilson Disease Mutation.
Sci Rep, 8, 2018
6IWR
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BU of 6iwr by Molmil
Crystal structure of GalNAc-T7 with UDP, GalNAc and Mn2+
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, N-acetylgalactosaminyltransferase 7, ...
Authors:Yu, C, Yin, Y.X.
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structural basis of carbohydrate transfer activity of UDP-GalNAc: Polypeptide N-acetylgalactosaminyltransferase 7.
Biochem. Biophys. Res. Commun., 510, 2019
6IWQ
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BU of 6iwq by Molmil
Crystal structure of GalNAc-T7 with Mn2+
Descriptor: MANGANESE (II) ION, N-acetylgalactosaminyltransferase 7
Authors:Yu, C, Yin, Y.X.
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis of carbohydrate transfer activity of UDP-GalNAc: Polypeptide N-acetylgalactosaminyltransferase 7.
Biochem. Biophys. Res. Commun., 510, 2019
5VGO
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BU of 5vgo by Molmil
Bruton's tyrosine kinase (BTK) with compound G-744
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-[2-(hydroxymethyl)-3-{1-methyl-6-oxo-5-[(pyrimidin-4-yl)amino]-1,6-dihydropyridin-3-yl}phenyl]-6,6-dimethyl-3,4,6,7-tetrahydro-2H-cyclopenta[4,5]thieno[2,3-c]pyridin-1(5H)-one, GLYCEROL, ...
Authors:Yu, C, Eigenbrot, C.
Deposit date:2017-04-11
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.621 Å)
Cite:Discovery of Potent and Selective Tricyclic Inhibitors of Bruton's Tyrosine Kinase with Improved Druglike Properties.
ACS Med Chem Lett, 8, 2017
1X32
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BU of 1x32 by Molmil
Three Dimensional Solution Structure of the Chromo1 domain of cpSRP43
Descriptor: chloroplast signal recognition particle component
Authors:Sivaraja, V, Kumar, T.K, Henry, R, Yu, C.
Deposit date:2005-04-28
Release date:2005-09-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structures of the chromodomains of cpSRP43
J.Biol.Chem., 280, 2005
5XQ1
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BU of 5xq1 by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
Descriptor: Fermitin family homolog 2,Integrin beta-3
Authors:Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
Deposit date:2017-06-05
Release date:2017-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.954 Å)
Cite:Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1X3P
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BU of 1x3p by Molmil
3D solution structure of the Chromo-3 domain of cpSRP43
Descriptor: cpSRP43
Authors:Leena, P.S.T, Kumar, T.K.S, Sivaraja, V, Henry, R, Yu, C.
Deposit date:2005-05-10
Release date:2005-09-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:3D Solution Structure of the Chromo-3 domain of cpSRP43
To be Published
1WVZ
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BU of 1wvz by Molmil
Solution Structure of the D2 Domain of the Fibroblast Growth Factor
Descriptor: Fibroblast growth factor receptor 2
Authors:Hung, K.W, Kumar, T.K.S, Yu, C.
Deposit date:2004-12-28
Release date:2005-12-28
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of the D2 Domain of the Fibroblast Growth Factor
To be Published
6XE4
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BU of 6xe4 by Molmil
BTK Fluorocyclopropyl amide inhibitor, Compound 25
Descriptor: (1S,2S)-N-[2'-(6-tert-butyl-8-fluoro-1-oxophthalazin-2(1H)-yl)-3'-(hydroxymethyl)-1-methyl-6-oxo[1,6-dihydro[3,4'-bipyridine]]-5-yl]-2-fluorocyclopropane-1-carboxamide, SULFATE ION, Tyrosine-protein kinase BTK
Authors:Kiefer, J.R, Crawford, J.J, Lee, W, Eigenbrot, C, Yu, C.
Deposit date:2020-06-11
Release date:2020-07-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stereochemical Differences in Fluorocyclopropyl Amides Enable Tuning of Btk Inhibition and Off-Target Activity.
Acs Med.Chem.Lett., 11, 2020
3U30
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BU of 3u30 by Molmil
Crystal structure of a linear-specific Ubiquitin fab bound to linear ubiquitin
Descriptor: Heavy chain Fab, Light chain Fab, linear di-ubiquitin
Authors:Matsumoto, M.L, Dong, K.C, Yu, C, Phu, L, Gao, X, Hannoush, R.N, Hymowitz, S.G, Kirkpatrick, D.S, Dixit, V.M, Kelley, R.F.
Deposit date:2011-10-04
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.428 Å)
Cite:Engineering and structural characterization of a linear polyubiquitin-specific antibody.
J.Mol.Biol., 418, 2012
8H67
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BU of 8h67 by Molmil
type I-B Cascade bound to a PAM-containing dsDNA target at 3.8 angstrom resolution.
Descriptor: CRISPR RNA, CRISPR associated protein Cas11b, CRISPR associated protein Cas5, ...
Authors:Xiao, Y, Lu, M, Yu, C, Zhang, Y.
Deposit date:2022-10-15
Release date:2024-05-01
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome editing of type I-B CRISPR-Cas.
Nat Commun, 15, 2024
6XNP
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BU of 6xnp by Molmil
Crystal Structure of Human STING CTD complex with SR-717
Descriptor: 1,2-ETHANEDIOL, 4,5-difluoro-2-{[6-(1H-imidazol-1-yl)pyridazine-3-carbonyl]amino}benzoic acid, GLYCEROL, ...
Authors:Chin, E.N, Yu, C, Wolan, D.W, Petrassi, H.M, Lairson, L.L.
Deposit date:2020-07-03
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Antitumor activity of a systemic STING-activating non-nucleotide cGAMP mimetic.
Science, 369, 2020
7SIY
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BU of 7siy by Molmil
cCBL TKB domain in complex with pZAP70 peptide
Descriptor: E3 ubiquitin-protein ligase CBL, MAGNESIUM ION, Peptide from Tyrosine-protein kinase ZAP-70
Authors:Murray, J.M, Yu, C.
Deposit date:2021-10-15
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:cCBL TKB domain in complex with pZAP70 peptide
To Be Published

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