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PDB: 31 件

6X7I
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Structure of the C-terminal domain of BCL-XL in membrane
分子名称: Bcl-2-like protein 1
著者Yao, Y, Tian, Y, Marassi, F.M.
登録日2020-05-30
公開日2020-07-01
最終更新日2024-05-15
実験手法SOLID-STATE NMR, SOLUTION NMR
主引用文献Conformational States of the Cytoprotective Protein Bcl-xL.
Biophys.J., 119, 2020
2RCA
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Crystal structure of the NR3B ligand binding core complex with glycine at 1.58 Angstrom resolution
分子名称: GLYCEROL, GLYCINE, Glutamate [NMDA] receptor subunit 3B
著者Yao, Y, Mayer, M.L.
登録日2007-09-19
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Molecular mechanism of ligand recognition by NR3 subtype glutamate receptors.
Embo J., 27, 2008
2RCB
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Crystal structure of the NR3B ligand binding core complex with D-serine at 1.62 Angstrom resolution
分子名称: D-SERINE, GLYCEROL, Glutamate [NMDA] receptor subunit 3B
著者Yao, Y, Mayer, M.L.
登録日2007-09-19
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Molecular mechanism of ligand recognition by NR3 subtype glutamate receptors.
Embo J., 27, 2008
2RC7
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Crystal structure of the NR3A ligand binding core complex with glycine at 1.58 Angstrom resolution
分子名称: BROMIDE ION, CHLORIDE ION, GLYCEROL, ...
著者Yao, Y, Mayer, M.L.
登録日2007-09-19
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Molecular mechanism of ligand recognition by NR3 subtype glutamate receptors.
Embo J., 27, 2008
2RC8
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Crystal structure of the NR3A ligand binding core complex with D-serine at 1.45 Angstrom resolution
分子名称: CHLORIDE ION, D-SERINE, GLYCEROL, ...
著者Yao, Y, Mayer, M.L.
登録日2007-09-19
公開日2008-08-05
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Molecular mechanism of ligand recognition by NR3 subtype glutamate receptors.
Embo J., 27, 2008
2RC9
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Crystal structure of the NR3A ligand binding core complex with ACPC at 1.96 Angstrom resolution
分子名称: 1-AMINOCYCLOPROPANECARBOXYLIC ACID, Glutamate [NMDA] receptor subunit 3A
著者Yao, Y, Mayer, M.L.
登録日2007-09-19
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Molecular mechanism of ligand recognition by NR3 subtype glutamate receptors.
Embo J., 27, 2008
1NMI
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Solution structure of the imidazole complex of iso-1 cytochrome c
分子名称: Cytochrome c, iso-1, HEME C, ...
著者Yao, Y, Tong, Y, Liu, G, Wang, J, Zheng, J, Tang, W.
登録日2003-01-10
公開日2003-02-04
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of the imidazole complex of iso-1 cytochrome c
To be Published
1I5T
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SOLUTION STRUCTURE OF CYANOFERRICYTOCHROME C
分子名称: CYANIDE ION, CYTOCHROME C, HEME C
著者Yao, Y, Qian, C, Ye, K, Wang, J, Tang, W.
登録日2001-02-28
公開日2001-03-21
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of cyanoferricytochrome c: ligand-controlled conformational flexibility and electronic structure of the heme moiety.
J.Biol.Inorg.Chem., 7, 2002
2AVX
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BU of 2avx by Molmil
solution structure of E coli SdiA1-171
分子名称: N-(2-OXOTETRAHYDROFURAN-3-YL)OCTANAMIDE, Regulatory protein sdiA
著者Yao, Y, Martinez-Yamout, M.A, Dickerson, T.J, Brogan, A.P, Wright, P.E, Dyson, H.J.
登録日2005-08-30
公開日2006-06-20
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Structure of the Escherichia coli quorum sensing protein SdiA: activation of the folding switch by acyl homoserine lactones.
J.Mol.Biol., 355, 2006
2LBT
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Solution structure of the C domain of RV0899(D236A) from mycobacterium tuberculosis
分子名称: Uncharacterized protein Rv0899/MT0922
著者Yao, Y, Marassi, F.
登録日2011-04-06
公開日2012-01-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Molecular Structure and Peptidoglycan Recognition of Mycobacterium tuberculosis ArfA (Rv0899).
J.Mol.Biol., 416, 2012
4KCD
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Crystal Structure of the NMDA Receptor GluN3A Ligand Binding Domain Apo State
分子名称: GLYCEROL, Glutamate receptor ionotropic, NMDA 3A
著者Yao, Y, Lau, A.Y, Mayer, M.L.
登録日2013-04-24
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Conformational Analysis of NMDA Receptor GluN1, GluN2, and GluN3 Ligand-Binding Domains Reveals Subtype-Specific Characteristics.
Structure, 21, 2013
4XS3
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Crystal structure of a metabolic reductase with (E)-1-benzyl-5-((1-methyl-5-oxo-2-thioxoimidazolidin-4-ylidene)methyl)pyridin-2(1H)-one
分子名称: (E)-1-benzyl-5-((1-methyl-5-oxo-2-thioxoimidazolidin-4-ylidene)methyl)pyridin-2(1H)-one, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zheng, B, Wu, F, Jiang, H, Kogiso, M, Yao, Y, Zhou, C, Li, X, Song, Y.
登録日2015-01-21
公開日2016-07-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.291 Å)
主引用文献Inhibition of Cancer-Associated Mutant Isocitrate Dehydrogenases by 2-Thiohydantoin Compounds.
J.Med.Chem., 58, 2015
4XRX
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Crystal structure of a metabolic reductase with (E)-5-((1-methyl-5-oxo-2-thioxoimidazolidin-4-ylidene)methyl)pyridin-2(1H)-one
分子名称: 5-[(E)-(1-methyl-5-oxo-2-thioxoimidazolidin-4-ylidene)methyl]pyridin-2(1H)-one, Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zheng, B, Wu, F, Jiang, H, Kogiso, M, Yao, Y, Zhou, C, Li, X, Song, Y.
登録日2015-01-21
公開日2015-12-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Inhibition of Cancer-Associated Mutant Isocitrate Dehydrogenases by 2-Thiohydantoin Compounds.
J.Med.Chem., 58, 2015
1M60
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Solution Structure of Zinc-substituted cytochrome c
分子名称: ZINC SUBSTITUTED HEME C, Zinc-substituted cytochrome c
著者Qian, C, Yao, Y, Tong, Y, Wang, J, Tang, W.
登録日2002-07-11
公開日2002-08-07
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structural analysis of zinc-substituted cytochrome c.
J.Biol.Inorg.Chem., 8, 2003
2QC1
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Crystal structure of the extracellular domain of the nicotinic acetylcholine receptor 1 subunit bound to alpha-bungarotoxin at 1.9 A resolution
分子名称: Acetylcholine receptor subunit alpha, Alpha-bungarotoxin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Dellisanti, C.D, Yao, Y, Stroud, J.C, Wang, Z, Chen, L.
登録日2007-06-18
公開日2007-08-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of the extracellular domain of nAChR alpha1 bound to alpha-bungarotoxin at 1.94 A resolution.
Nat.Neurosci., 10, 2007
1I5U
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SOLUTION STRUCTURE OF CYTOCHROME B5 TRIPLE MUTANT (E48A/E56A/D60A)
分子名称: CYTOCHROME B5, PROTOPORPHYRIN IX CONTAINING FE
著者Qian, C, Yao, Y, Tang, W, Wang, J, Zhongxian, H.
登録日2001-02-28
公開日2001-03-21
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Effects of charged amino-acid mutation on the solution structure of cytochrome b(5) and binding between cytochrome b(5) and cytochrome c.
Protein Sci., 10, 2001
1NMJ
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The Solution Structure of Rat Ab-(1-28) and its Interaction with Zinc: Insights into the Scarity of Amyloid Deposition in Aged Rat Brain
分子名称: amyloid beta-peptide from Alzheimer's disease amyloid A4 protein homolog
著者Huang, J, Yao, Y, Tang, W.X.
登録日2003-01-10
公開日2003-01-28
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The solution structure of rat Abeta-(1-28) and its interaction with zinc ion: insights into the scarcity of amyloid deposition in aged rat brain
J.Biol.Inorg.Chem., 9, 2004
5V9U
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Crystal Structure of small molecule ARS-1620 covalently bound to K-Ras G12C
分子名称: (S)-1-{4-[6-chloro-8-fluoro-7-(2-fluoro-6-hydroxyphenyl)quinazolin-4-yl] piperazin-1-yl}propan-1-one, CALCIUM ION, GLYCEROL, ...
著者Janes, M.R, Zhang, J, Li, L.-S, Hansen, R, Peters, U, Guo, X, Chen, Y, Babbar, A, Firdaus, S.J, Feng, J, Chen, J.H, Li, S, Brehmer, D, Darjania, L, Li, S, Long, Y.O, Thach, C, Liu, Y, Zarieh, A, Ely, T, Kucharski, J.M, Kessler, L.V, Wu, T, Wang, Y, Yao, Y, Deng, X, Zarrinkar, P, Dashyant, D, Lorenzi, M.V, Hu-Lowe, D, Patricelli, M.P, Ren, P, Liu, Y.
登録日2017-03-23
公開日2018-02-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor.
Cell, 172, 2018
2N2L
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NMR structure of yersinia pestis ail (attachment invasion locus) in decylphosphocholine micelles calculated with implicit membrane solvation
分子名称: Outer membrane protein X
著者Marassi, F.M, Ding, Y, Tian, Y, Schwieters, C.D, Yao, Y.
登録日2015-05-10
公開日2015-07-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Backbone structure of Yersinia pestis Ail determined in micelles by NMR-restrained simulated annealing with implicit membrane solvation.
J.Biomol.Nmr, 63, 2015
2N2M
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NMR structure of yersinia pestis Ail (attachment invasion locus) in decylphosphocholine micelles
分子名称: Outer membrane protein X
著者Marassi, F.M, Ding, Y, Yao, Y.
登録日2015-05-10
公開日2015-07-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Backbone structure of Yersinia pestis Ail determined in micelles by NMR-restrained simulated annealing with implicit membrane solvation.
J.Biomol.Nmr, 63, 2015
4I3K
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Crystal structure of a metabolic reductase with 1-hydroxy-6-(4-hydroxybenzyl)-4-methylpyridin-2(1H)-one
分子名称: 1-hydroxy-6-(4-hydroxybenzyl)-4-methylpyridin-2(1H)-one, Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Zheng, B, Yao, Y, Liu, Z, Deng, L, Anglin, J.L, Jiang, H, Prasad, B.V.V, Song, Y.
登録日2012-11-26
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.3056 Å)
主引用文献Crystallographic Investigation and Selective Inhibition of Mutant Isocitrate Dehydrogenase.
ACS Med Chem Lett, 4, 2013
1FNT
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CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST IN COMPLEX WITH THE PROTEASOME ACTIVATOR PA26 FROM TRYPANOSOME BRUCEI AT 3.2 ANGSTROMS RESOLUTION
分子名称: MAGNESIUM ION, PROTEASOME ACTIVATOR PROTEIN PA26, PROTEASOME COMPONENT C1, ...
著者Whitby, F.G, Masters, E, Kramer, L, Knowlton, J.R, Yao, Y, Wang, C.C, Hill, C.P.
登録日2000-08-23
公開日2001-04-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for the activation of 20S proteasomes by 11S regulators.
Nature, 408, 2000
4I3L
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Crystal structure of a metabolic reductase with 6-benzyl-1-hydroxy-4-methylpyridin-2(1H)-one
分子名称: 6-benzyl-1-hydroxy-4-methylpyridin-2(1H)-one, Isocitrate dehydrogenase [NADP] cytoplasmic, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Zheng, B, Yao, Y, Liu, Z, Deng, L, Anglin, J.L, Jiang, H, Prasad, B.V.V, Song, Y.
登録日2012-11-26
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.292 Å)
主引用文献Crystallographic Investigation and Selective Inhibition of Mutant Isocitrate Dehydrogenase.
ACS Med Chem Lett, 4, 2013
3SR4
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Crystal Structure of Human DOT1L in Complex with a Selective Inhibitor
分子名称: (2S)-2-azanyl-4-[[(2S,3S,4R,5R)-5-[6-(methylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, ACETATE ION, GLYCEROL, ...
著者Diao, J, Chen, P, Yao, Y, Prasad, B.V.V, Song, Y.
登録日2011-07-06
公開日2011-10-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Selective Inhibitors of Histone Methyltransferase DOT1L: Design, Synthesis, and Crystallographic Studies.
J.Am.Chem.Soc., 133, 2011
2KSM
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Central B domain of Rv0899 from Mycobacterium tuberculosis
分子名称: MYCOBACTERIUM TUBERCULOSIS RV0899/MT0922/OmpATb
著者Teriete, P, Yao, Y, Kolodzik, A, Yu, J, Song, H, Niederweis, M, Marassi, F.M.
登録日2010-01-07
公開日2010-02-02
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Mycobacterium tuberculosis Rv0899 adopts a mixed alpha/beta-structure and does not form a transmembrane beta-barrel.
Biochemistry, 49, 2010

 

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