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PDB: 485 results

1UEO
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BU of 1ueo by Molmil
Solution structure of the [T8A]-Penaeidin-3
Descriptor: Penaeidin-3a
Authors:Yang, Y, Poncet, J, Garnier, J, Zatylny, C, Bachere, E, Aumelas, A.
Deposit date:2003-05-20
Release date:2003-10-21
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the recombinant penaeidin-3, a shrimp antimicrobial peptide
J.Biol.Chem., 278, 2003
6WL5
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BU of 6wl5 by Molmil
Crystal structure of EcmrR C-terminal domain
Descriptor: 1,2-ETHANEDIOL, CETYL-TRIMETHYL-AMMONIUM, CHLORIDE ION, ...
Authors:Yang, Y, Liu, C, Liu, B.
Deposit date:2020-04-18
Release date:2021-04-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural visualization of transcription activated by a multidrug-sensing MerR family regulator.
Nat Commun, 12, 2021
8JYS
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BU of 8jys by Molmil
SARS-CoV-2 Spike RBD (dimer) in complex with two 2S-1244 nanobodies
Descriptor: IBT-CoV144 nanobody, Spike protein S1
Authors:Yang, Y, Zhang, C.H.
Deposit date:2023-07-03
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:A novel nanobody broadly neutralizes SARS-CoV-2 via induction of spike trimer dimers conformation.
Exploration (Beijing), 4, 2024
5KJ5
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BU of 5kj5 by Molmil
Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+
Descriptor: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-17
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.113 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
5KLL
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BU of 5kll by Molmil
Crystal structure of 2-hydroxymuconate-6-semialdehyde derived tautomeric intermediate in 2-aminomuconate 6-semialdehyde dehydrogenase N169D
Descriptor: (3~{E},5~{E})-6-oxidanyl-2-oxidanylidene-hexa-3,5-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, SODIUM ION
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-24
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
5KLO
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BU of 5klo by Molmil
Crystal structure of thioacyl intermediate in 2-aminomuconate 6-semialdehyde dehydrogenase N169A
Descriptor: (2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-24
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
5KLM
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BU of 5klm by Molmil
Crystal structure of 2-hydroxymuconate-6-semialdehyde derived intermediate in NAD(+)-bound 2-aminomuconate 6-semialdehyde dehydrogenase N169D
Descriptor: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-24
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
5KLN
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BU of 5kln by Molmil
Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169A in complex with NAD+
Descriptor: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-24
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
5KLK
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BU of 5klk by Molmil
Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+ and 2-hydroxymuconate-6-semialdehyde
Descriptor: (2E,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-24
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
2JOB
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BU of 2job by Molmil
Solution structure of an antilipopolysaccharide factor from shrimp and its possible Lipid A binding site
Descriptor: antilipopolysaccharide factor
Authors:Yang, Y, Boze, H, Chemardin, P, Padilla, A, Moulin, G, Tassanakajon, A, Pugniere, M, Roquet, F, Gueguen, Y, Bachere, E, Aumelas, A.
Deposit date:2007-03-02
Release date:2008-03-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:NMR structure of rALF-Pm3, an anti-lipopolysaccharide factor from shrimp: Model of the possible lipid A-binding site
Biopolymers, 91, 2009
6WVD
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BU of 6wvd by Molmil
Human JAGN1
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Green fluorescent protein, Protein jagunal homolog 1 chimera
Authors:Yang, Y, Liu, S, Li, W.
Deposit date:2020-05-05
Release date:2021-01-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Termini restraining of small membrane proteins enables structure determination at near-atomic resolution.
Sci Adv, 6, 2020
5W4S
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BU of 5w4s by Molmil
Solution structure of C2 domain from protein kinase C alpha in ternary complex with calcium and V5-pHM peptide
Descriptor: CALCIUM ION, Protein kinase C alpha type, V5-pHM peptide
Authors:Yang, Y, Igumenova, T.I.
Deposit date:2017-06-12
Release date:2018-04-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis of Protein Kinase C alpha Regulation by the C-Terminal Tail.
Biophys. J., 114, 2018
2MYO
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BU of 2myo by Molmil
SOLUTION STRUCTURE OF MYOTROPHIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: MYOTROPHIN
Authors:Yang, Y, Nanduri, S, Sen, S, Qin, J.
Deposit date:1998-08-17
Release date:1999-08-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structural basis of ankyrin-like repeat function as revealed by the solution structure of myotrophin.
Structure, 6, 1998
2JZ1
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BU of 2jz1 by Molmil
DSX_long
Descriptor: Protein doublesex
Authors:Yang, Y, Zhang, W, Bayrer, J.R, Weiss, M.A.
Deposit date:2007-12-21
Release date:2008-01-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Doublesex and the Regulation of Sexual Dimorphism in Drosophila melanogaster: STRUCTURE, FUNCTION, AND MUTAGENESIS OF A FEMALE-SPECIFIC DOMAIN.
J.Biol.Chem., 283, 2008
8AZT
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BU of 8azt by Molmil
Type II amyloid-beta 42 filaments from high-spin supernatants of aqueous extracts from Alzheimer's disease brains | ABeta42
Descriptor: Amyloid-beta precursor protein
Authors:Yang, Y, Stern, M.A, Meunier, L.A, Liu, W, Cai, Y.Q, Ericsson, M, Liu, L, Selkoe, J.D, Goedert, M, Scheres, H.W.S.
Deposit date:2022-09-06
Release date:2022-11-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Abundant A beta fibrils in ultracentrifugal supernatants of aqueous extracts from Alzheimer's disease brains.
Neuron, 111, 2023
2KMM
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BU of 2kmm by Molmil
Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)
Descriptor: Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
Authors:Yang, Y, Ramelot, T.A, Cort, J.R, Lee, D, Ciccosanti, C, Hamilton, K, Nair, R, Rost, B, Acton, T.B, Xiao, R, Swapna, G, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-07-31
Release date:2009-11-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR structure of the TGS domain of PG1808 from Porphyromonas gingivalis. Northeast Structural Genomics Consortium Target PgR122A (418-481)
To be Published
2KON
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BU of 2kon by Molmil
NMR solution structure of CV_2116 from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvT4(1-82)
Descriptor: Uncharacterized protein
Authors:Yang, Y, Ramelot, T.A, Cort, J.R, Garcia, M, Yee, A, Arrowsmith, C.H, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-09-24
Release date:2009-10-13
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR solution structure of CV_2116 from Chromobacterium violaceum.Northeast Structural Genomics Consortium Target CvT4(1-82)
To be Published
2K6H
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BU of 2k6h by Molmil
NMR structure of an unusually 28 kDa Active Mutant of Maize Ribosome-Inactivating protein (MOD)
Descriptor: Ribosome-inactivating protein
Authors:Yang, Y, Mak, A.N, Shaw, P.C, Sze, K.H.
Deposit date:2008-07-09
Release date:2009-07-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of an active mutant of maize ribosome-inactivating protein (MOD) and its interaction with the ribosomal stalk protein P2.
J.Mol.Biol., 395, 2010
2KKL
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BU of 2kkl by Molmil
Solution NMR structure of FHA domain of Mb1858 from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR243C (24-155).
Descriptor: Uncharacterized protein Mb1858
Authors:Yang, Y, Ramelot, T.A, Wang, D, Foote, E.L, Jiang, M, Nair, R, Rost, B, Swapna, G, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-06-25
Release date:2009-07-07
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution NMR structure of FHA domain of Mb1858 from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR243C (24-155).
To be Published
2KS0
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BU of 2ks0 by Molmil
Solution NMR structure of the Q251Q8_DESHY(21-82) protein from Desulfitobacterium Hafniense, Northeast Structural Genomics Consortium Target DhR8C
Descriptor: Uncharacterized protein
Authors:Yang, Y, Ramelot, T.A, Cort, J.R, Wang, H, Ciccosanti, C, Foote, E.L, Jiang, M, Janjua, H, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-12-23
Release date:2010-01-12
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Combining NMR and EPR methods for homodimer protein structure determination.
J.Am.Chem.Soc., 132, 2010
2KGW
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BU of 2kgw by Molmil
Solution Structure of the carboxy-terminal domain of OmpATb, a pore forming protein from Mycobacterium tuberculosis
Descriptor: Outer membrane protein A
Authors:Yang, Y, Auguin, D, Delbecq, S, Hoh, F, Dumas, E, Molle, V, Saint, N.
Deposit date:2009-03-20
Release date:2010-03-02
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the Mycobacterium tuberculosis OmpATb protein: A model of an oligomeric channel in the mycobacterial cell wall.
Proteins, 79, 2011
2JZ0
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BU of 2jz0 by Molmil
DSX_short
Descriptor: Protein doublesex
Authors:Yang, Y, Zhang, W, Bayrer, J.R, Weiss, M.A.
Deposit date:2007-12-21
Release date:2008-01-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Doublesex and the Regulation of Sexual Dimorphism in Drosophila melanogaster: STRUCTURE, FUNCTION, AND MUTAGENESIS OF A FEMALE-SPECIFIC DOMAIN.
J.Biol.Chem., 283, 2008
2KGS
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BU of 2kgs by Molmil
Solution structure of the amino-terminal domain of OmpATb, a pore forming protein from Mycobacterium tuberculosis
Descriptor: Uncharacterized protein Rv0899/MT0922
Authors:Yang, Y, Auguin, D, Delbecq, S, Dumas, E, Molle, V, Saint, N.
Deposit date:2009-03-18
Release date:2010-03-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the Mycobacterium tuberculosis OmpATb protein: A model of an oligomeric channel in the mycobacterial cell wall
Proteins, 79, 2011
2KT8
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BU of 2kt8 by Molmil
Solution NMR structure of the CPE1231(468-535) protein from Clostridium perfringens, Northeast Structural Genomics Consortium Target CpR82B
Descriptor: Probable surface protein
Authors:Yang, Y, Ramelot, T.A, Lee, D, Ciccosanti, C, Hamilton, K, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-01-21
Release date:2010-02-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of the CPE1231(468-535) protein from Clostridium perfringens, Northeast Structural Genomics Consortium Target CpR82B
To be Published
2KVO
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BU of 2kvo by Molmil
Solution NMR structure of Photosystem II reaction center Psb28 protein from Synechocystis sp.(strain PCC 6803), Northeast Structural Genomics Consortium Target SgR171
Descriptor: Photosystem II reaction center psb28 protein
Authors:Yang, Y, Ramelot, T.A, Cort, J.R, Wang, D, Ciccosanti, C, Hamilton, K, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-03-22
Release date:2010-04-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of photosystem II reaction center protein Psb28 from Synechocystis sp. Strain PCC 6803.
Proteins, 79, 2011

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