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PDB: 382 results

6KEU
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BU of 6keu by Molmil
Wildtype E53, a microbial HSL esterase
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Yang, X.C, Li, Z.Y, Xu, X.W, Li, J.X.
Deposit date:2019-07-05
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Wildtype E53, a microbial HSL esterase
To Be Published
2IS9
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BU of 2is9 by Molmil
Structure of yeast DCN-1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Defective in cullin neddylation protein 1, ...
Authors:Yang, X, Zhou, J, Sun, L, Wei, Z, Gao, J, Gong, W, Xu, R.M, Rao, Z, Liu, Y.
Deposit date:2006-10-16
Release date:2007-06-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis for the function of DCN-1 in protein Neddylation.
J.Biol.Chem., 282, 2007
7CIH
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BU of 7cih by Molmil
Microbial Hormone-sensitive lipase E53 mutant S285G
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Yang, X, Li, Z, Xu, X, Li, J.
Deposit date:2020-07-07
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.789 Å)
Cite:Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
6KF5
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BU of 6kf5 by Molmil
Microbial Hormone-sensitive lipase E53 mutant I256L
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Yang, X, Li, Z.Y, Li, J, Xu, X.W.
Deposit date:2019-07-06
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Microbial Hormone-sensitive lipase E53 mutant I256L
To Be Published
7W8N
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BU of 7w8n by Molmil
Microbial Hormone-sensitive lipase E53 wild type
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Yang, X, Li, Z, Xu, X, Li, J.
Deposit date:2021-12-08
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
6LH4
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BU of 6lh4 by Molmil
Crystal structural of MacroD1-ADPr complex
Descriptor: ADP-ribose glycohydrolase MACROD1, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Yang, X, Ma, Y, Li, Y.
Deposit date:2019-12-06
Release date:2020-12-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Molecular basis for the MacroD1-mediated hydrolysis of ADP-ribosylation.
DNA Repair (Amst), 94, 2020
2N9G
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BU of 2n9g by Molmil
Solution structure of the bromodomain of Trypanosoma brucei Bromodomain Factor 2(BDF2)
Descriptor: Putative uncharacterized protein
Authors:Yang, X.
Deposit date:2015-11-23
Release date:2016-11-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the bromodomain of Trypanosoma brucei Bromodomain Factor 2(BDF2)
To be Published
6J5G
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BU of 6j5g by Molmil
Complex structure of MAb 4.2-scFv with tick-borne encephalitis virus envelope protein
Descriptor: Envelope protein E, antibody heavy chain, antibody light chain
Authors:Yang, X, Qi, J, Peng, R, Dai, L, Gould, E.A, Tien, P, Gao, G.F.
Deposit date:2019-01-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.291 Å)
Cite:Molecular Basis of a Protective/Neutralizing Monoclonal Antibody Targeting Envelope Proteins of both Tick-Borne Encephalitis Virus and Louping Ill Virus.
J. Virol., 93, 2019
6J5C
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BU of 6j5c by Molmil
Louping ill virus envelope protein
Descriptor: Envelope protein E
Authors:Yang, X, Qi, J, Peng, R, Dai, L, Gould, E.A, Tien, P, Gao, G.F.
Deposit date:2019-01-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Molecular Basis of a Protective/Neutralizing Monoclonal Antibody Targeting Envelope Proteins of both Tick-Borne Encephalitis Virus and Louping Ill Virus.
J. Virol., 93, 2019
6J5D
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BU of 6j5d by Molmil
Complex structure of MAb 4.2-scFv with louping ill virus envelope protein Domain III
Descriptor: Envelope, antibody heavy chain, antibody light chain
Authors:Yang, X, Qi, J, Peng, R, Dai, L, Gould, E.A, Tien, P, Gao, G.F.
Deposit date:2019-01-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular Basis of a Protective/Neutralizing Monoclonal Antibody Targeting Envelope Proteins of both Tick-Borne Encephalitis Virus and Louping Ill Virus.
J. Virol., 93, 2019
6J5F
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BU of 6j5f by Molmil
Complex structure of MAb 4.2-scFv with tick-borne encephalitis virus envelope protein Domain III
Descriptor: Envelope protein, antibody heavy chain, antibody light chain
Authors:Yang, X, Qi, J, Peng, R, Dai, L, Gould, E.A, Tien, P, Gao, G.F.
Deposit date:2019-01-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Molecular Basis of a Protective/Neutralizing Monoclonal Antibody Targeting Envelope Proteins of both Tick-Borne Encephalitis Virus and Louping Ill Virus.
J. Virol., 93, 2019
6JEC
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BU of 6jec by Molmil
Structure of a triple-helix region of human collagen type II
Descriptor: human collagen type II
Authors:Yang, X, Zhu, Y, Ye, S, Zhang, R.
Deposit date:2019-02-05
Release date:2020-02-05
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Structure of a triple-helix region of human collagen type II.
To Be Published
6JKL
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BU of 6jkl by Molmil
Structure of a triple-helix region of human collagen type II
Descriptor: A triple-helix region of human collagen type II
Authors:Yang, X, Zhu, Y, Ye, S, Zhang, R.
Deposit date:2019-03-01
Release date:2020-03-04
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Structure of a triple-helix region of human collagen type II.
To Be Published
7CIP
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BU of 7cip by Molmil
Microbial Hormone-sensitive lipase E53 wild type
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Yang, X, Li, Z, Xu, X, Li, J.
Deposit date:2020-07-08
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Microbial Hormone-sensitive lipase E53 wild type
To Be Published
7TR4
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BU of 7tr4 by Molmil
MA2-MART1-HLAA0201
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA-A*02:01, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2022-01-27
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Facile repurposing of peptide-MHC-restricted antibodies for cancer immunotherapy.
Nat.Biotechnol., 41, 2023
7WLT
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BU of 7wlt by Molmil
the Curved Structure of mPIEZO1 in Lipid Bilayer
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, ...
Authors:Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
Deposit date:2022-01-13
Release date:2022-04-13
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7W6V
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BU of 7w6v by Molmil
Crystal structure of a dicobalt-substituted small laccase at 2.47 angstrom
Descriptor: COBALT (II) ION, Putative copper oxidase
Authors:Yang, X, Wu, F, Wu, W, Chen, X, Fan, S, Yu, P, Mao, L.
Deposit date:2021-12-02
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:A versatile artificial metalloenzyme scaffold enabling direct bioelectrocatalysis in solution.
Sci Adv, 8, 2022
7WLU
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BU of 7wlu by Molmil
The Flattened Structure of mPIEZO1 in Lipid Bilayer
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, Piezo-type mechanosensitive ion channel component 1
Authors:Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
Deposit date:2022-01-13
Release date:2022-04-13
Last modified:2022-07-06
Method:ELECTRON MICROSCOPY (6.81 Å)
Cite:Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7XRW
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BU of 7xrw by Molmil
Solution structure of T. brucei RAP1
Descriptor: Repressor activator protein 1
Authors:Yang, X, Pan, X.H, Ji, Z.Y, Wong, K.B, Zhang, M.J, Zhao, Y.X.
Deposit date:2022-05-12
Release date:2023-03-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The RRM-mediated RNA binding activity in T. brucei RAP1 is essential for VSG monoallelic expression.
Nat Commun, 14, 2023
7F7O
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BU of 7f7o by Molmil
APC-Asef FP assay tracer
Descriptor: Adenomatous polyposis coli protein, N-[3',6'-bis(oxidanyl)-3-oxidanylidene-spiro[2-benzofuran-1,9'-xanthene]-5-yl]methanethioamide, Tracer 7
Authors:Yang, X, Zhang, J.
Deposit date:2021-06-30
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The tracer of FP assay for screening APC-Asef inhbitors
To Be Published
7VO0
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BU of 7vo0 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (trimer of dimers)
Descriptor: DNA_NT (84-MER), DNA_T (84-MER), Putative metal uptake regulation protein, ...
Authors:Yang, X, Zheng, J.
Deposit date:2021-10-12
Release date:2022-08-03
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7WQX
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BU of 7wqx by Molmil
Structure of Inactive-EP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Enteropeptidase
Authors:Yang, X.L, Ding, Z.Y, Huang, H.J.
Deposit date:2022-01-26
Release date:2022-10-26
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures reveal the activation and substrate recognition mechanism of human enteropeptidase.
Nat Commun, 13, 2022
7WQW
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BU of 7wqw by Molmil
Structure of Active-EP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Enteropeptidase catalytic light chain, Enteropeptidase non-catalytic heavy chain
Authors:Yang, X.L, Ding, Z.Y, Huang, H.J.
Deposit date:2022-01-26
Release date:2022-10-26
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures reveal the activation and substrate recognition mechanism of human enteropeptidase.
Nat Commun, 13, 2022
7WR7
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BU of 7wr7 by Molmil
Structure of Inhibited-EP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-carbamimidamidobenzoic acid, Enteropeptidase catalytic light chain, ...
Authors:Yang, X.L, Ding, Z.Y, Huang, H.J.
Deposit date:2022-01-26
Release date:2022-10-26
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures reveal the activation and substrate recognition mechanism of human enteropeptidase.
Nat Commun, 13, 2022
7WQZ
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BU of 7wqz by Molmil
Structure of Active-mutEP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Enteropeptidase catalytic light chain, Enteropeptidase non-catalytic heavy chain
Authors:Yang, X.L, Ding, Z.Y, Huang, H.J.
Deposit date:2022-01-26
Release date:2022-10-26
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structures reveal the activation and substrate recognition mechanism of human enteropeptidase.
Nat Commun, 13, 2022

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