2IS9

Structure of yeast DCN-1

Summary for 2IS9

DescriptorDefective in cullin neddylation protein 1, PLATINUM (II) ION, CHLORIDE ION, ... (5 entities in total)
Functional Keywordsubiquitin, dcn1, transcription
Biological sourceSaccharomyces cerevisiae (baker's yeast)
Total number of polymer chains1
Total molecular weight25145.1
Authors
Yang, X.,Zhou, J.,Sun, L.,Wei, Z.,Gao, J.,Gong, W.,Xu, R.M.,Rao, Z.,Liu, Y. (deposition date: 2006-10-16, release date: 2007-06-26, Last modification date: 2017-10-18)
Primary citation
Yang, X.,Zhou, J.,Sun, L.,Wei, Z.,Gao, J.,Gong, W.,Xu, R.M.,Rao, Z.,Liu, Y.
Structural basis for the function of DCN-1 in protein Neddylation.
J.Biol.Chem., 282:24490-24494, 2007
PubMed: 17597076 (PDB entries with the same primary citation)
DOI: 10.1074/jbc.C700038200
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.92 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.23830.5%1.6%4.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2is9
no rotation
Molmil generated image of 2is9
rotated about x axis by 90°
Molmil generated image of 2is9
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2is9
no rotation
Molmil generated image of 2is9
rotated about x axis by 90°
Molmil generated image of 2is9
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2is9.pdb1.gz [39.96 KB])
Coordinate files for Biological unit (2is9.pdb2.gz [77.91 KB])