Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 303 results

5HLH
DownloadVisualize
BU of 5hlh by Molmil
Crystal structure of the overoxidized AbfR bound to DNA
Descriptor: DNA (5'-D(*TP*AP*AP*CP*TP*CP*AP*AP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*TP*TP*GP*AP*GP*T)-3'), MarR family transcriptional regulator
Authors:Liu, G, Liu, X, Gan, J, Yang, C.-G.
Deposit date:2016-01-15
Release date:2017-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights into the Redox-Sensing Mechanism of MarR-Type Regulator AbfR.
J. Am. Chem. Soc., 139, 2017
9IRP
DownloadVisualize
BU of 9irp by Molmil
Structure of ClpP from Staphylococcus aureus in complex with ZG297
Descriptor: (6S,9aS)-6-[(2S)-butan-2-yl]-4,7-bis(oxidanylidene)-8-(phenanthren-9-ylmethyl)-N-[4,4,4-tris(fluoranyl)butyl]-3,6,9,9a-tetrahydro-2H-pyrazino[1,2-a]pyrimidine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit, MAGNESIUM ION
Authors:Wei, B.Y, Wang, P.Y, Zhang, T, Yang, C.-G.
Deposit date:2024-07-16
Release date:2024-10-23
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structure of ClpP from Staphylococcus aureus in complex with ZG297
to be published
9IRM
DownloadVisualize
BU of 9irm by Molmil
Structure of ClpP from Staphylococcus aureus in complex with ZG283
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (6S,9aS)-8-(anthracen-9-ylmethyl)-6-[(2S)-butan-2-yl]-4,7-bis(oxidanylidene)-N-[4,4,4-tris(fluoranyl)butyl]-3,6,9,9a-tetrahydro-2H-pyrazino[1,2-a]pyrimidine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit
Authors:Wei, B.Y, Wang, P.Y, Zhang, T, Yang, C.-G.
Deposit date:2024-07-16
Release date:2024-10-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of ClpP from Staphylococcus aureus in complex with ZG283
To be published
8JSJ
DownloadVisualize
BU of 8jsj by Molmil
Crystal structure of an N-terminal cyclic nucleotide-binding domain of a PycTIR from Novosphingobium pentaromativorans
Descriptor: PycTIR
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-06-20
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.858 Å)
Cite:Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system.
Nat Commun, 15, 2024
4ZS2
DownloadVisualize
BU of 4zs2 by Molmil
Structural complex of FTO/fluorescein
Descriptor: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase FTO, ...
Authors:Wang, T, Hong, T, Huang, Y, Yang, C.G, Zhou, X.
Deposit date:2015-05-13
Release date:2015-11-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Fluorescein Derivatives as Bifunctional Molecules for the Simultaneous Inhibiting and Labeling of FTO Protein
J.Am.Chem.Soc., 137, 2015
1JF4
DownloadVisualize
BU of 1jf4 by Molmil
Crystal Structure Of Component IV Glycera Dibranchiata Monomeric Hemoglobin
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, monomer hemoglobin component IV
Authors:Park, H.J, Yang, C, Treff, N, Satterlee, J.D, Kang, C.H.
Deposit date:2001-06-20
Release date:2002-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer Ferric Hemoglobin Components III and IV
Proteins, 49, 2002
1JL7
DownloadVisualize
BU of 1jl7 by Molmil
Crystal Structure Of CN-Ligated Component III Glycera Dibranchiata Monomeric Hemoglobin
Descriptor: CYANIDE ION, Monomer hemoglobin component III, PROTOPORPHYRIN IX CONTAINING FE
Authors:Park, H.J, Yang, C, Treff, N, Satterlee, J.D, Kang, C.
Deposit date:2001-07-16
Release date:2002-07-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer Ferric Hemoglobin Components III and IV
Proteins, 49, 2002
1JF3
DownloadVisualize
BU of 1jf3 by Molmil
Crystal Structure Of Component III Glycera Dibranchiata Monomeric Hemoglobin
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, monomer hemoglobin component III
Authors:Park, H.J, Yang, C, Treff, N, Satterlee, J.D, Kang, C.H.
Deposit date:2001-06-20
Release date:2002-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer Ferric Hemoglobin Components III and IV
Proteins, 49, 2002
1JL6
DownloadVisualize
BU of 1jl6 by Molmil
Crystal Structure of CN-Ligated Component IV Glycera Dibranchiata Monomeric Hemoglobin
Descriptor: CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, monomer hemoglobin component IV
Authors:Park, H.J, Yang, C, Treff, N, Satterlee, J.D, Kang, C.
Deposit date:2001-07-16
Release date:2002-07-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of Unligated and CN-Ligated Glycera dibranchiata Monomer Ferric Hemoglobin Components III and IV
Proteins, 49, 2002
2AZP
DownloadVisualize
BU of 2azp by Molmil
Crystal Structure of PA1268 Solved by Sulfur SAD
Descriptor: hypothetical protein PA1268
Authors:Liu, Y, Gorodichtchenskaia, E, Skarina, T, Yang, C, Joachimiak, A, Edwards, A, Pai, E.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-09-12
Release date:2005-12-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal Structure of PA1268 Solved by Sulfur SAD
To be Published
8JSK
DownloadVisualize
BU of 8jsk by Molmil
Crystal structure of an N-terminal cyclic nucleotide-binding domain of a PycTIR from Pseudovibrio sp. in complex with cUMP
Descriptor: PycTIR, Uridine-3',5'-cyclic monophosphate
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-06-20
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system.
Nat Commun, 15, 2024
8JSZ
DownloadVisualize
BU of 8jsz by Molmil
Crystal structure of a uridylate cyclase from Anabaena sp.
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-06-20
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system.
Nat Commun, 15, 2024
8JSF
DownloadVisualize
BU of 8jsf by Molmil
Crystal structure of a cytidylate cyclase from multidrug-resistant bacterium Elizabethkingia anopheles
Descriptor: cytidylate cyclase
Authors:Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2023-06-20
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional characterization of cyclic pyrimidine-regulated anti-phage system.
Nat Commun, 15, 2024
4ZS3
DownloadVisualize
BU of 4zs3 by Molmil
Structural complex of 5-aminofluorescein bound to the FTO protein
Descriptor: 2-OXOGLUTARIC ACID, 5-amino-2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, ...
Authors:Wang, T, Hong, T, Huang, Y, Yang, C.G, Zhou, X.
Deposit date:2015-05-13
Release date:2015-11-04
Last modified:2015-11-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Fluorescein Derivatives as Bifunctional Molecules for the Simultaneous Inhibiting and Labeling of FTO Protein
J.Am.Chem.Soc., 137, 2015
5JH7
DownloadVisualize
BU of 5jh7 by Molmil
Tubulin-Eribulin complex
Descriptor: (1S,3S,6S,9S,12S,14R,16R,18S,20R,21R,22S,26R,29S,31R,32S,33R,35R,36S)-20-[(2S)-3-amino-2-hydroxypropyl]-21-methoxy-14-methyl-8,15-dimethylidene-2,19,30,34,37,39,40,41-octaoxanonacyclo[24.9.2.1~3,32~.1~3,33~.1~6,9~.1~12,16~.0~18,22~.0~29,36~.0~31,35~]hentetracontan-24-one (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Doodhi, H, Prota, A.E, Rodriguez-Garcia, R, Xiao, H, Custar, D.W, Bargsten, K, Katrukha, E.A, Hilbert, M, Hua, S, Jiang, K, Grigoriev, I, Yang, C.-P.H, Cox, D, Band Horwitz, S, Kapitein, L.C, Akhmanova, A, Steinmetz, M.O.
Deposit date:2016-04-20
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Termination of Protofilament Elongation by Eribulin Induces Lattice Defects that Promote Microtubule Catastrophes.
Curr.Biol., 26, 2016
2AR3
DownloadVisualize
BU of 2ar3 by Molmil
E90A mutant structure of PlyL
Descriptor: PHOSPHATE ION, ZINC ION, prophage lambdaba02, ...
Authors:Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C.
Deposit date:2005-08-19
Release date:2006-06-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and lytic activity of a Bacillus anthracis prophage endolysin.
J.Biol.Chem., 280, 2005
3NUQ
DownloadVisualize
BU of 3nuq by Molmil
Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Dong, A, Yang, C, Singer, A.U, Evdokimova, E, Kudritsdka, M, Brown, G, Edwards, A.M, Joachimiak, A, Savchenko, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-07-07
Release date:2010-08-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a putative nucleotide phosphatase from Saccharomyces cerevisiae
To be Published
1COE
DownloadVisualize
BU of 1coe by Molmil
SOLUTION CONFORMATION OF COBROTOXIN: A NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING STUDY
Descriptor: COBROTOXIN
Authors:Yu, C, Bhaskaran, R, Yang, C.C.
Deposit date:1994-05-11
Release date:1995-01-26
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Solution conformation of cobrotoxin: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
Biochemistry, 32, 1993
1COD
DownloadVisualize
BU of 1cod by Molmil
SOLUTION CONFORMATION OF COBROTOXIN: A NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING STUDY
Descriptor: COBROTOXIN
Authors:Yu, C, Bhaskaran, R, Yang, C.C.
Deposit date:1994-05-11
Release date:1995-01-26
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution conformation of cobrotoxin: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
Biochemistry, 32, 1993
3BI3
DownloadVisualize
BU of 3bi3 by Molmil
X-ray structure of AlkB protein bound to dsDNA containing 1meA/A with cofactors
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, DNA (5'-D(*DAP*DAP*DCP*DGP*DGP*DTP*DAP*DTP*DTP*DAP*DCP*DCP*DT)-3'), ...
Authors:Yi, C, Yang, C.-G.
Deposit date:2007-11-29
Release date:2008-04-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
1TK1
DownloadVisualize
BU of 1tk1 by Molmil
YEAST OXYGEN-DEPENDENT COPROPORPHYRINOGEN OXIDASE
Descriptor: Coproporphyrinogen III oxidase
Authors:Phillips, J.D, Whitby, F.G, Warby, C.A, Labbe, P, Yang, C, Pflugrath, J.W, Ferrara, J.D, Robinson, H, Kushner, J.P, Hill, C.P.
Deposit date:2004-06-08
Release date:2004-07-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Oxygen-dependant Coproporphyrinogen Oxidase (Hem13p) of Saccharomyces cerevisiae
J.Biol.Chem., 279, 2004
4OTX
DownloadVisualize
BU of 4otx by Molmil
Structure of the anti-Francisella tularensis O-antigen antibody N203 Fab fragment
Descriptor: AZIDE ION, CHLORIDE ION, N203 heavy chain, ...
Authors:Lu, Z, Rynkiewicz, M.J, Yang, C.-Y, Madico, G, Perkins, H.M, Roche, M.I, Seaton, B.A, Sharon, J.
Deposit date:2014-02-14
Release date:2014-09-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional and Structural Characterization of Francisella tularensis O-Antigen Antibodies at the Low End of Antigen Reactivity.
Monoclon Antib Immunodiagn Immunother, 33, 2014
3BGK
DownloadVisualize
BU of 3bgk by Molmil
The crystal structure of hypothetic protein SMU.573 from Streptococcus mutans
Descriptor: PHOSPHATE ION, POTASSIUM ION, Putative uncharacterized protein
Authors:Liang, Y.H, Zhou, Y.F, Yang, C, Su, X.D.
Deposit date:2007-11-26
Release date:2008-12-16
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of Streptococcus mutans protein SMU.573 solved from the anomalous signal measured with in-house chromium radiation
To be Published
5C90
DownloadVisualize
BU of 5c90 by Molmil
Staphylococcus aureus ClpP mutant - Y63A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ATP-dependent Clp protease proteolytic subunit
Authors:Ye, F, Liu, H, Zhang, J, Gan, J, Yang, C.-G.
Deposit date:2015-06-26
Release date:2016-05-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization of Gain-of-Function Mutant Provides New Insights into ClpP Structure
Acs Chem.Biol., 11, 2016
5HLG
DownloadVisualize
BU of 5hlg by Molmil
Structure of reduced AbfR bound to DNA
Descriptor: DNA (5'-D(*TP*AP*AP*CP*TP*CP*AP*AP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*TP*TP*GP*AP*GP*T)-3'), MarR family transcriptional regulator
Authors:Liu, G, Liu, X, Gan, J, Yang, C.G.
Deposit date:2016-01-15
Release date:2017-01-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights into the Redox-Sensing Mechanism of MarR-Type Regulator AbfR.
J. Am. Chem. Soc., 139, 2017

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon