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PDB: 364 results

4AIA
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BU of 4aia by Molmil
The structural basis of 3-methyladenine recognition by 3- methyladenine DNA glycosylase I (TAG) from Staphylococcus aureus
Descriptor: 3-METHYL-3H-PURIN-6-YLAMINE, DNA-3-METHYLADENINE GLYCOSYLASE I, SULFATE ION, ...
Authors:Yan, X, Naismith, J.H.
Deposit date:2012-02-08
Release date:2012-02-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Model for 3-Methyladenine Recognition by 3-Methyladenine DNA Glycosylase I (Tag) from Staphylococcus Aureus.
Acta Crystallogr.,Sect.F, 68, 2012
5OPW
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BU of 5opw by Molmil
Crystal structure of the GroEL mutant A109C
Descriptor: 60 kDa chaperonin
Authors:Yan, X, Shi, Q, Bracher, A, Milicic, G, Singh, A.K, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2017-08-10
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:GroEL Ring Separation and Exchange in the Chaperonin Reaction.
Cell, 172, 2018
5OPX
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BU of 5opx by Molmil
Crystal structure of the GroEL mutant A109C in complex with GroES and ADP BeF2
Descriptor: 10 kDa chaperonin, 60 kDa chaperonin, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Yan, X, Shi, Q, Bracher, A, Milicic, G, Singh, A.K, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2017-08-10
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:GroEL Ring Separation and Exchange in the Chaperonin Reaction.
Cell, 172, 2018
6XKC
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BU of 6xkc by Molmil
Crystal structure of E3 ligase
Descriptor: Protein fem-1 homolog C
Authors:Yan, X, Dong, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J.R, Dong, C, Structural Genomics Consortium (SGC)
Deposit date:2020-06-26
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Molecular basis for ubiquitin ligase CRL2 FEM1C -mediated recognition of C-degron.
Nat.Chem.Biol., 17, 2021
7JYA
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BU of 7jya by Molmil
Crystal structure of E3 ligase in complex with peptide
Descriptor: ASN-ARG-ARG-ARG-ARG-TRP-ARG-GLU-ARG-GLN-ARG, Protein fem-1 homolog C, UNKNOWN ATOM OR ION
Authors:Yan, X, Dong, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J.R, Dong, C, Structural Genomics Consortium (SGC)
Deposit date:2020-08-30
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Molecular basis for ubiquitin ligase CRL2 FEM1C -mediated recognition of C-degron.
Nat.Chem.Biol., 17, 2021
4I0N
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BU of 4i0n by Molmil
Pore forming protein
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Necrotic enteritis toxin B
Authors:Yan, X, Porter, C.J, Hardy, S.P, Steer, D, Smith, A.I, Quinset, N, Hughes, V, Cheung, J.K, Keyburn, A.L, Kaldhusdal, M, Moore, R.J, Bannam, T.L, Whisstock, J.C, Rood, J.I.
Deposit date:2012-11-16
Release date:2013-03-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional analysis of the pore-forming toxin NetB from Clostridium perfringens
MBio, 4, 2013
2IVY
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BU of 2ivy by Molmil
Crystal structure of hypothetical protein sso1404 from Sulfolobus solfataricus P2
Descriptor: HYPOTHETICAL PROTEIN SSO1404
Authors:Yan, X, Carter, L.G, Dorward, M, Liu, H, McMahon, S.A, Oke, M, Powers, H, White, M.F, Naismith, J.H.
Deposit date:2006-06-22
Release date:2006-06-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
2JG6
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BU of 2jg6 by Molmil
CRYSTAL STRUCTURE OF A 3-METHYLADENINE DNA GLYCOSYLASE I FROM STAPHYLOCOCCUS AUREUS
Descriptor: DNA-3-METHYLADENINE GLYCOSIDASE, ZINC ION
Authors:Yan, X, Carter, L.G, Liu, H, Dorward, M, McMahon, S.A, Johnson, K.A, Oke, M, Coote, P.J, Naismith, J.H.
Deposit date:2007-02-08
Release date:2007-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
2JG5
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BU of 2jg5 by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHOFRUCTOKINASE FROM STAPHYLOCOCCUS AUREUS
Descriptor: FRUCTOSE 1-PHOSPHATE KINASE
Authors:Yan, X, Carter, L.G, Johnson, K.A, Liu, H, Dorward, M, McMahon, S.A, Oke, M, Powers, H, Coote, P.J, Naismith, J.H.
Deposit date:2007-02-08
Release date:2007-02-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
4QNC
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BU of 4qnc by Molmil
Crystal structure of a SemiSWEET in an occluded state
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, PENTADECANE, chemical transport protein
Authors:Yan, X, Yuyong, T, Liang, F, Perry, K.
Deposit date:2014-06-17
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Structures of bacterial homologues of SWEET transporters in two distinct conformations.
Nature, 515, 2014
4QND
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BU of 4qnd by Molmil
Crystal structure of a SemiSWEET
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Chemical transport protein, ...
Authors:Yan, X, Yuyong, T, Liang, F, Perry, K.
Deposit date:2014-06-17
Release date:2014-09-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Structures of bacterial homologues of SWEET transporters in two distinct conformations.
Nature, 515, 2014
4ZYL
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BU of 4zyl by Molmil
Crystal structure of response regulator RPA3017 in red light signaling of R. palustris
Descriptor: RphyB protein
Authors:Yang, X, Moffat, K.
Deposit date:2015-05-21
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris.
Acta Crystallogr F Struct Biol Commun, 71, 2015
7XMW
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BU of 7xmw by Molmil
Crystal structure of anti-CRISPR protein AcrVIA2
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, AcrVIA2, SELENIUM ATOM, ...
Authors:Yan, X, Li, X, Song, G.
Deposit date:2022-04-27
Release date:2023-05-31
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of AcrVIA2 and its binding mechanism to CRISPR-Cas13a.
Biochem.Biophys.Res.Commun., 612, 2022
5Y4S
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BU of 5y4s by Molmil
Structure of a methyltransferase complex
Descriptor: Chemotaxis protein methyltransferase 1
Authors:Yan, X, Xin, L, Tan, Y.J, Jin, S, Liang, Z.X, Gao, Y.G.
Deposit date:2017-08-04
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.405 Å)
Cite:Structural analyses unravel the molecular mechanism of cyclic di-GMP regulation of bacterial chemotaxis via a PilZ adaptor protein.
J. Biol. Chem., 293, 2018
5Y4R
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BU of 5y4r by Molmil
Structure of a methyltransferase complex
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Chemotaxis protein methyltransferase 1, Cyclic diguanosine monophosphate-binding protein PA4608, ...
Authors:Yan, X, Xin, L, Tan, Y.J, Jin, S, Liang, Z.X, Gao, Y.G.
Deposit date:2017-08-04
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Structural analyses unravel the molecular mechanism of cyclic di-GMP regulation of bacterial chemotaxis via a PilZ adaptor protein.
J. Biol. Chem., 293, 2018
7EP2
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BU of 7ep2 by Molmil
Crystal structure of ZYG11B bound to GGFN degron
Descriptor: Protein zyg-11 homolog B
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP5
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BU of 7ep5 by Molmil
Crystal structure of ZER1 bound to GKLH degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP0
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BU of 7ep0 by Molmil
Crystal structure of ZYG11B bound to GSTE degron
Descriptor: Protein zyg-11 homolog B, sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP3
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BU of 7ep3 by Molmil
Crystal structure of ZER1 bound to GAGN degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.513 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP1
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BU of 7ep1 by Molmil
Crystal structure of ZYG11B bound to GFLH degron
Descriptor: Protein zyg-11 homolog B
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP4
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BU of 7ep4 by Molmil
Crystal structure of ZER1 bound to GFLH degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7YLL
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BU of 7yll by Molmil
Crystal structure of TTEDbh
Descriptor: DNA polymerase IV, MAGNESIUM ION, PHOSPHATE ION
Authors:Yan, X, Tian, L, Gao, H.
Deposit date:2022-07-26
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.6000092 Å)
Cite:Structure and function of extreme TLS DNA polymerase TTEDbh from Thermoanaerobacter tengcongensis.
Int.J.Biol.Macromol., 253, 2023
7N2O
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BU of 7n2o by Molmil
AS4.2-YEIH-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, GLYCEROL, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2Q
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BU of 7n2q by Molmil
AS4.3-YEIH-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AS4.3 T cell receptor alpha chain, AS4.3 T cell receptor beta chain, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2S
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BU of 7n2s by Molmil
AS3.1-PRPF3-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, GLYCEROL, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022

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