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PDB: 888 results

4KTH
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Structure of A/Hubei/1/2010 H5 HA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Shore, D.A, Yang, H, Carney, P.J, Chang, J.C, Stevens, J.
Deposit date:2013-05-20
Release date:2013-11-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Antigenic Variation among Diverse Clade 2 H5N1 Viruses.
Plos One, 8, 2013
8U78
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Structure of a N-Me-D-Gln4,Lys10-teixobactin analogue
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CHLORIDE ION, N-Methyl-D-Gln4,Lys10-teixobactin
Authors:Nowick, J.S, Yang, H, Kreutzer, A.G.
Deposit date:2023-09-14
Release date:2024-03-06
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Supramolecular Interactions of Teixobactin Analogues in the Crystal State.
J.Org.Chem., 89, 2024
1Y6J
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BU of 1y6j by Molmil
L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135
Descriptor: L-lactate dehydrogenase
Authors:Chen, L, Yang, H, Kataeva, I, Chen, L.R, Tempel, W, Lee, D, Habel, J, Zhou, W, Lin, D, Ljungdahl, L, Liu, Z.-J, Rose, J, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-12-06
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135
To be Published
4FUW
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BU of 4fuw by Molmil
Crystal structure of Ego3 mutant
Descriptor: Protein SLM4, SULFATE ION
Authors:Zhang, T, Peli-Gulli, M.P, Yang, H, De Virgilio, C, Ding, J.
Deposit date:2012-06-28
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ego3 functions as a homodimer to mediate the interaction between Gtr1-Gtr2 and Ego1 in the ego complex to activate TORC1.
Structure, 20, 2012
4H0N
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BU of 4h0n by Molmil
Crystal structure of Spodoptera frugiperda DNMT2 E260A/E261A/K263A mutant
Descriptor: CALCIUM ION, DNMT2, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Li, S, Du, J, Yang, H, Yin, J, Zhong, J, Ding, J.
Deposit date:2012-09-09
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.712 Å)
Cite:Functional and structural characterization of DNMT2 from Spodoptera frugiperda.
J Mol Cell Biol, 5, 2013
1ZCL
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BU of 1zcl by Molmil
prl-1 c104s mutant in complex with sulfate
Descriptor: SULFATE ION, protein tyrosine phosphatase 4a1
Authors:Sun, J.P, Wang, W.Q, Yang, H, Liu, S, Liang, F, Fedorov, A.A, Almo, S.C, Zhang, Z.Y.
Deposit date:2005-04-12
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and Biochemical Properties of PRL-1, a Phosphatase Implicated in Cell Growth, Differentiation, and Tumor Invasion.
Biochemistry, 44, 2005
2PH7
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BU of 2ph7 by Molmil
Crystal structure of AF2093 from Archaeoglobus fulgidus
Descriptor: Uncharacterized protein AF_2093
Authors:Chang, J.C, Yang, H, Hwang, J, Zhu, J, Chen, L, Fu, Z.-Q, Xu, H, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2007-04-10
Release date:2007-05-08
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of AF2093 from Archaeoglobus fulgidus.
To be Published
7E5X
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BU of 7e5x by Molmil
THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE apo form at 2.2 angstrom
Descriptor: 3C-like proteinase
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-02-21
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
4FTX
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BU of 4ftx by Molmil
Crystal structure of Ego3 homodimer
Descriptor: Protein SLM4, SUCCINIC ACID
Authors:Zhang, T, Peli-Gulli, M.P, Yang, H, De Virgilio, C, Ding, J.
Deposit date:2012-06-28
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ego3 functions as a homodimer to mediate the interaction between Gtr1-Gtr2 and Ego1 in the ego complex to activate TORC1.
Structure, 20, 2012
1DK4
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BU of 1dk4 by Molmil
CRYSTAL STRUCTURE OF MJ0109 GENE PRODUCT INOSITOL MONOPHOSPHATASE
Descriptor: INOSITOL MONOPHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Stec, B, Yang, H, Johnson, K.A, Chen, L, Roberts, M.F.
Deposit date:1999-12-06
Release date:2000-11-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MJ0109 is an enzyme that is both an inositol monophosphatase and the 'missing' archaeal fructose-1,6-bisphosphatase.
Nat.Struct.Biol., 7, 2000
1D5R
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BU of 1d5r by Molmil
Crystal Structure of the PTEN Tumor Suppressor
Descriptor: L(+)-TARTARIC ACID, PHOSPHOINOSITIDE PHOSPHATASE PTEN
Authors:Lee, J.O, Yang, H, Georgescu, M.-M, Di Cristofano, A, Pavletich, N.P.
Deposit date:1999-10-11
Release date:1999-11-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the PTEN tumor suppressor: implications for its phosphoinositide phosphatase activity and membrane association.
Cell(Cambridge,Mass.), 99, 1999
5XQ0
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BU of 5xq0 by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
Descriptor: Fermitin family homolog 2,Integrin beta-1, GLYCEROL
Authors:Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
Deposit date:2017-06-05
Release date:2017-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3KUP
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BU of 3kup by Molmil
Crystal Structure of the CBX3 Chromo Shadow Domain
Descriptor: Chromobox protein homolog 3, UNKNOWN ATOM OR ION
Authors:Tempel, W, Li, Z, Li, Y, Kozieradzki, I, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2009-11-27
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal Structure of the CBX3 Chromo Shadow Domain
to be published
8H68
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BU of 8h68 by Molmil
Crystal structure of Caenorhabditis elegans NMAD-1 in complex with NOG and Mg(II)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Shi, Y, Ding, J, Yang, H.
Deposit date:2022-10-16
Release date:2023-02-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caenorhabditis elegans NMAD-1 functions as a demethylase for actin.
J Mol Cell Biol, 15, 2023
8GXG
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BU of 8gxg by Molmil
The crystal structure of SARS-CoV-2 main protease in complex with 14a
Descriptor: 3C-like proteinase nsp5, N-[(2S)-3-(4-fluorophenyl)-1-oxidanylidene-1-[[(2S,3S)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-1-benzofuran-2-carboxamide
Authors:Zhao, Y, Zhao, J, Shao, M, Yang, H, Rao, Z.
Deposit date:2022-09-20
Release date:2023-09-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure-based design of pan-coronavirus inhibitors targeting host cathepsin L and calpain-1.
Signal Transduct Target Ther, 9, 2024
8GXH
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BU of 8gxh by Molmil
The crystal structure of SARS-CoV-2 main protease in complex with 14b
Descriptor: 3C-like proteinase nsp5, N-[(2S)-3-cyclohexyl-1-oxidanylidene-1-[[(2S,3R)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-1-benzofuran-2-carboxamide
Authors:Zhao, Y, Zhao, J, Shao, M, Yang, H, Rao, Z.
Deposit date:2022-09-20
Release date:2023-09-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structure-based design of pan-coronavirus inhibitors targeting host cathepsin L and calpain-1.
Signal Transduct Target Ther, 9, 2024
7DVP
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BU of 7dvp by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp4|5 peptidyl substrate
Descriptor: 3C-like proteinase, nsp4/5 peptidyl substrate
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-01-14
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DW0
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BU of 7dw0 by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp14|15 peptidyl substrate
Descriptor: 3C-like proteinase, nsp14/15 peptidyl substrate
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-01-15
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DW6
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BU of 7dw6 by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp15|16 peptidyl substrate
Descriptor: 3C-like proteinase, nsp15/16 peptidyl substrate
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-01-15
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DVY
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BU of 7dvy by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp9|10 peptidyl substrate
Descriptor: 3C-like proteinase, nsp9/10 peptidyl substrate
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-01-15
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DVX
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BU of 7dvx by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp6|7 peptidyl substrate
Descriptor: 3C-like proteinase, nsp6/7 peptidyl substrate
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-01-15
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
7DVW
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BU of 7dvw by Molmil
SARS-CoV-2 Mpro mutant (H41A) in complex with nsp5|6 peptidyl substrate
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, nsp5/6 peptidyl substrate
Authors:Liu, X, Zhao, Y, Yang, H, Rao, Z.
Deposit date:2021-01-15
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural basis for replicase polyprotein cleavage and substrate specificity of main protease from SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 119, 2022
8HWN
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BU of 8hwn by Molmil
aldo-keto reductase DepB
Descriptor: CHLORIDE ION, DepB, SODIUM ION
Authors:Chen, M, Yang, H, Lu, F.
Deposit date:2022-12-31
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of DepB capable of DON detoxification
To Be Published
5XPY
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BU of 5xpy by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
Descriptor: ACETATE ION, Fermitin family homolog 2, GLYCEROL
Authors:Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
Deposit date:2017-06-05
Release date:2017-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XPZ
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BU of 5xpz by Molmil
Structural basis of kindlin-mediated integrin recognition and activation
Descriptor: Fermitin family homolog 2, GLYCEROL
Authors:Li, H, Yang, H, Sun, K, Zhang, Z, Yu, C, Wei, Z.
Deposit date:2017-06-05
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structural basis of kindlin-mediated integrin recognition and activation
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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PDB entries from 2024-10-30

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