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PDB: 190 results

4IBB
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BU of 4ibb by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: Polymerase cofactor VP35, {4-[(5R)-3-hydroxy-2-oxo-4-(thiophen-2-ylcarbonyl)-5-(2,4,5-trimethylphenyl)-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-12-08
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
2KF7
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BU of 2kf7 by Molmil
Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by human telomeric repeats in K+ solution (with G7-to-BRG substitution)
Descriptor: HUMAN TELOMERE DNA
Authors:Lim, K.W, Amrane, S, Bouaziz, S, Xu, W, Mu, Y, Patel, D.J, Luu, K.N, Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
6LNC
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BU of 6lnc by Molmil
CryoEM structure of Cascade-TniQ complex
Descriptor: CRISPR RNA (60-MER), CRISPR-associated protein Cas6, CRISPR-associated protein Cas7, ...
Authors:Wang, B, Xu, W, Yang, H.
Deposit date:2019-12-28
Release date:2020-02-19
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural basis of a Tn7-like transposase recruitment and DNA loading to CRISPR-Cas surveillance complex.
Cell Res., 30, 2020
6BMG
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BU of 6bmg by Molmil
Structure of Recombinant Dwarf Sperm Whale Myoglobin (Oxy)
Descriptor: ACETATE ION, CADMIUM ION, Myoglobin, ...
Authors:Samuel, P.P, Miller, M.D, Xu, W, Alvarado, S, Phillips Jr, G.N, Olson, J.S.
Deposit date:2017-11-14
Release date:2017-11-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of Recombinant Dwarf Sperm Whale Myoglobin (Oxy)
To Be Published
5YDF
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BU of 5ydf by Molmil
Crystal structure of a disease-related gene, hCDC73(1-100)
Descriptor: Parafibromin
Authors:Sun, W, Kuang, X.L, Liu, Y.P, Tian, L.F, Yan, X.X, Xu, W.Q.
Deposit date:2017-09-13
Release date:2017-12-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Crystal structure of the N-terminal domain of human CDC73 and its implications for the hyperparathyroidism-jaw tumor (HPT-JT) syndrome
Sci Rep, 7, 2017
1R4O
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BU of 1r4o by Molmil
Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
Descriptor: 5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*GP*AP*TP*GP*TP*TP*CP*TP*G)-3', Glucocorticoid receptor, ZINC ION
Authors:Luisi, B.F, Xu, W.X, Otwinowski, Z, Freedman, L.P, Yamamoto, K.R, Sigler, P.B.
Deposit date:2003-10-07
Release date:2003-10-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic Analysis of the Interaction of The Glucocorticoid Receptor with DNA
Nature, 352, 1991
6BUI
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BU of 6bui by Molmil
Crystal structure of a membrane protein, crystal form III
Descriptor: Integral membrane protein
Authors:Ma, D, Wang, Z, Xu, W.
Deposit date:2017-12-10
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
1R4R
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BU of 1r4r by Molmil
Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
Descriptor: 5'-D(*CP*TP*GP*AP*GP*AP*AP*CP*AP*TP*CP*AP*TP*GP*TP*TP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*TP*GP*AP*TP*GP*TP*TP*CP*TP*CP*A)-3', Glucocorticoid receptor, ...
Authors:Luisi, B.F, Xu, W.X, Otwinowski, Z, Freedman, L.P, Yamamoto, K.R, Sigler, P.B.
Deposit date:2003-10-07
Release date:2003-10-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic Analysis of the Interaction of the Glucocorticoid Receptor with DNA
Nature, 352, 1991
5YDE
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BU of 5yde by Molmil
Crystal structure of a disease-related gene, hCDC73(1-111)
Descriptor: Parafibromin
Authors:Sun, W, Kuang, X.L, Liu, Y.P, Tian, L.F, Yan, X.X, Xu, W.Q.
Deposit date:2017-09-13
Release date:2017-12-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.023 Å)
Cite:Crystal structure of the N-terminal domain of human CDC73 and its implications for the hyperparathyroidism-jaw tumor (HPT-JT) syndrome
Sci Rep, 7, 2017
3M89
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BU of 3m89 by Molmil
Structure of TubZ-GTP-g-S
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, FtsZ/tubulin-related protein
Authors:Ni, L, Xu, W, Schumacher, M.A.
Deposit date:2010-03-17
Release date:2010-07-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
6BUG
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BU of 6bug by Molmil
Crystal structure of a membrane protein, crystal form I
Descriptor: D-alanyl carrier protein, D-alanyl transfer protein DltB
Authors:Ma, D, Wang, Z, Xu, W.
Deposit date:2017-12-10
Release date:2018-10-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
3KO1
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BU of 3ko1 by Molmil
Cystal structure of thermosome from Acidianus tengchongensis strain S5
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperonin
Authors:Huo, Y, Zhang, K, Hu, Z, Wang, L, Zhai, Y, Zhou, Q, Lander, G, He, Y, Zhu, J, Xu, W, Dong, Z, Sun, F.
Deposit date:2009-11-12
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of group II chaperonin in the open state.
Structure, 18, 2010
3MKY
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BU of 3mky by Molmil
Structure of SopB(155-323)-18mer DNA complex, I23 form
Descriptor: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
Authors:Schumacher, M.A, Piro, K, Xu, W.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
6BUH
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BU of 6buh by Molmil
Crystal structure of a membrane protein, crystal form II
Descriptor: D-alanyl carrier protein, D-alanyl transfer protein DltB
Authors:Ma, D, Wang, Z, Xu, W.
Deposit date:2017-12-10
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
3MKW
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BU of 3mkw by Molmil
Structure of sopB(155-272)-18mer complex, I23 form
Descriptor: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
Authors:Schumacher, M.A, Piro, K, Xu, W.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
8TW0
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BU of 8tw0 by Molmil
Crystal Structure of a synthetic ABC heterotrimeric Collagen-like Peptide at 1.53 A
Descriptor: Collagen Mimetic Peptide A, Collagen Mimetic Peptide B, Collagen Mimetic Peptide C, ...
Authors:Miller, M.D, Cole, C.C, Xu, W, Walker, D.R, Hulgan, S.A.H, Pogostin, B.H, Swain, J.W.R, Duella, R, Misiura, M, Wang, X, Kolomeisky, A.B, Phillips Jr, G.N, Hartgerink, J.D.
Deposit date:2023-08-18
Release date:2024-05-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Heterotrimeric collagen helix with high specificity of assembly results in a rapid rate of folding.
Nat.Chem., 16, 2024
5UFL
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BU of 5ufl by Molmil
Crystal structure of a CIP2A core domain
Descriptor: Protein CIP2A, ZINC ION
Authors:Wang, Z, Wang, J, Rao, Z, Xu, W.
Deposit date:2017-01-04
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Oncoprotein CIP2A is stabilized via interaction with tumor suppressor PP2A/B56.
EMBO Rep., 18, 2017
8WEX
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BU of 8wex by Molmil
Crystal structure of N-acetyl sugar amidotransferase from Legionella pneumophila
Descriptor: N-acetyl sugar amidotransferase, ZINC ION
Authors:Gao, J, Xu, W, Ge, H.
Deposit date:2023-09-19
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural Characterization of an N-Acetyl Sugar Amidotransferase Involved in the Lipopolysaccharide Biosynthesis in Bacteria.
Int J Mol Sci, 24, 2023
3EZ2
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BU of 3ez2 by Molmil
Partition protein-ADP complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Schumacher, M.A, Dunham, T.D, Xu, W, Funnell, B.
Deposit date:2008-10-22
Release date:2009-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.
Embo J., 28, 2009
3JS6
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BU of 3js6 by Molmil
Crystal structure of apo psk41 parM protein
Descriptor: Uncharacterized ParM protein
Authors:Schumacher, M.A, Xu, W, Firth, N.
Deposit date:2009-09-09
Release date:2010-01-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and filament dynamics of the pSK41 actin-like ParM protein: implications for plasmid DNA segregation.
J.Biol.Chem., 285, 2010
1XTN
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BU of 1xtn by Molmil
crystal structure of CISK-PX domain with sulfates
Descriptor: SULFATE ION, Serine/threonine-protein kinase Sgk3
Authors:Xing, Y, Liu, D, Zhang, R, Joachimiak, A, Songyang, Z, Xu, W.
Deposit date:2004-10-22
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of membrane targeting by the Phox homology domain of cytokine-independent survival kinase (CISK-PX)
J.Biol.Chem., 279, 2004
1XTE
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BU of 1xte by Molmil
crystal structure of CISK-PX domain
Descriptor: Serine/threonine-protein kinase Sgk3
Authors:Xing, Y, Liu, D, Zhang, R, Joachimiak, A, Songyang, Z, Xu, W.
Deposit date:2004-10-21
Release date:2004-11-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of membrane targeting by the Phox homology domain of cytokine-independent survival kinase (CISK-PX)
J.Biol.Chem., 279, 2004
4PIW
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BU of 4piw by Molmil
Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12
Descriptor: TDP-4-keto-6-deoxy-D-glucose transaminase family protein
Authors:Wang, F, Xu, W, Helmich, K.E, Singh, S, Yennamalli, R.M, Miller, M.D, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-05-09
Release date:2014-07-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12
To Be Published
3V3L
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BU of 3v3l by Molmil
Crystal structure of human RNF146 WWE domain in complex with iso-ADPRibose
Descriptor: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), E3 ubiquitin-protein ligase RNF146
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2011-12-13
Release date:2012-02-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination.
Genes Dev., 26, 2012
6CF6
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BU of 6cf6 by Molmil
RNF146 TBM-Tankyrase ARC2-3 complex
Descriptor: RNF146, Tankyrase-1
Authors:Da Rosa, P.A, Xu, W.
Deposit date:2018-02-13
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural basis for tankyrase-RNF146 interaction reveals noncanonical tankyrase-binding motifs.
Protein Sci., 27, 2018

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