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PDB: 281 results

8D71
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BU of 8d71 by Molmil
Human Ago2 bound to miR122(21nt)
Descriptor: MAGNESIUM ION, Protein argonaute-2, miR-122-21nt
Authors:Xiao, Y, MacRae, I.
Deposit date:2022-06-07
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A tiny loop in the Argonaute PIWI domain tunes small RNA seed strength.
Embo Rep., 24, 2023
8D0Y
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BU of 8d0y by Molmil
Crystal Structure of HIV-1 BG505 SOSIPv8 Trimer in Complex with CD4bs targeting antibody 21N13 and interface targeting antibody 35O22 at 4.7 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22scFv Heavy Chain Variable, ...
Authors:Xian, Y, Wilson, I.A.
Deposit date:2022-05-26
Release date:2023-07-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (4.7 Å)
Cite:The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
8D50
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BU of 8d50 by Molmil
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.1) in Complex with antibodies PGT124 and 35O22 at 4.3 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
Authors:Xian, Y, Wilson, I.A.
Deposit date:2022-06-03
Release date:2023-12-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (4.32 Å)
Cite:Structural and Antigenic Characterization of B Cell Mosaic Env Trimers
To Be Published
8D01
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BU of 8d01 by Molmil
The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
Descriptor: 21N13 Fab heavy chain, 21N13 Fab light chain
Authors:Xian, Y, Wilson, I.A.
Deposit date:2022-05-25
Release date:2023-12-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and Antigenic Characterization of B Cell Mosaic Env Trimers
To Be Published
8D4R
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BU of 8d4r by Molmil
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.2) in Complex with antibodies PGT124 and 35O22 at 3.8 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
Authors:Xian, Y, Wilson, I.A.
Deposit date:2022-06-02
Release date:2023-12-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
6A5A
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BU of 6a5a by Molmil
Crystal structure of plant Receptor-like Kinase ANX1
Descriptor: Receptor-like protein kinase ANXUR1
Authors:Xiao, Y, Chai, J.
Deposit date:2018-06-22
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.942 Å)
Cite:Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5C
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BU of 6a5c by Molmil
Crystal structure of plant Receptor-like Kinase ANX2
Descriptor: Receptor-like protein kinase ANXUR2
Authors:Xiao, Y, Chai, J.
Deposit date:2018-06-23
Release date:2019-06-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5E
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BU of 6a5e by Molmil
Crystal structure of plant peptide RALF23 in complex with FER and LLG2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GPI-anchored protein LLG2, ...
Authors:Xiao, Y, Chai, J.
Deposit date:2018-06-23
Release date:2019-06-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.766 Å)
Cite:Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5B
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BU of 6a5b by Molmil
Crystal structure of plant Receptor-like Kinase FER
Descriptor: Receptor-like protein kinase FERONIA
Authors:Xiao, Y, Chai, J.
Deposit date:2018-06-23
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.205 Å)
Cite:Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
6A5D
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BU of 6a5d by Molmil
Crystal structure of plant Glycosylphosphatidylinositol-anchored Protein LLG1
Descriptor: GPI-anchored protein LLG1, alpha-L-fucopyranose-(1-3)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Xiao, Y, Chai, J.
Deposit date:2018-06-23
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Mechanisms of RALF peptide perception by a heterotypic receptor complex.
Nature, 572, 2019
2AMN
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BU of 2amn by Molmil
Solution structure of Fowlicidin-1, a novel Cathelicidin antimicrobial peptide from chicken
Descriptor: cathelicidin
Authors:Xiao, Y, Dai, H, Bommineni, Y.R, Prakash, O, Zhang, G.
Deposit date:2005-08-09
Release date:2006-07-18
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structure-activity relationships of fowlicidin-1, a cathelicidin antimicrobial peptide in chicken.
Febs J., 273, 2006
2MXU
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BU of 2mxu by Molmil
42-Residue Beta Amyloid Fibril
Descriptor: Amyloid beta A4 protein
Authors:Xiao, Y, Ma, B, McElheny, D, Parthasarathy, S, Long, F, Hoshi, M, Nussinov, R, Ishii, Y.
Deposit date:2015-01-14
Release date:2015-05-06
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:A beta (1-42) fibril structure illuminates self-recognition and replication of amyloid in Alzheimer's disease.
Nat.Struct.Mol.Biol., 22, 2015
5XVN
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BU of 5xvn by Molmil
E. far Cas1-Cas2/prespacer binary complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
Authors:Xiao, Y, Ng, S, Nam, K.H, Ke, A.
Deposit date:2017-06-28
Release date:2017-10-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017
5XVO
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BU of 5xvo by Molmil
E. fae Cas1-Cas2/prespacer/target ternary complex revealing DNA sampling and half-integration states
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
Authors:Xiao, Y, Ng, S, Nam, K.H, Ke, A.
Deposit date:2017-06-28
Release date:2017-10-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017
5XVP
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BU of 5xvp by Molmil
E. fae Cas1-Cas2/prespacer/target ternary complex revealing the fully integrated states
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(P*TP*TP*CP*TP*CP*CP*GP*AP*G)-3'), ...
Authors:Xiao, Y, Ng, S, Nam, K.H, Ke, A.
Deposit date:2017-06-28
Release date:2017-10-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:How type II CRISPR-Cas establish immunity through Cas1-Cas2-mediated spacer integration.
Nature, 550, 2017
8J1V
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BU of 8j1v by Molmil
Cryo-EM structure of SARS-CoV2 Omicron BA.5 spike in complex with 8-9D Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8-9D heavy chain, 8-9D light chain, ...
Authors:Xiang, Y, Li, R.
Deposit date:2023-04-13
Release date:2023-11-29
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:A lung-selective delivery of mRNA encoding broadly neutralizing antibody against SARS-CoV-2 infection.
Nat Commun, 14, 2023
8J1T
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BU of 8j1t by Molmil
Local refined cryo-EM structure of Omicron BA.5 RBD in complex with 8-9D Fab
Descriptor: 8-9D heavy chain, 8-9D light chain, Spike protein
Authors:Xiang, Y, Li, R.
Deposit date:2023-04-13
Release date:2023-11-29
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A lung-selective delivery of mRNA encoding broadly neutralizing antibody against SARS-CoV-2 infection.
Nat Commun, 14, 2023
5U0A
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BU of 5u0a by Molmil
CRISPR RNA-guided surveillance complex
Descriptor: CRISPR-associated protein, Cas5e family, Cse1 family, ...
Authors:Xiao, Y, Luo, M, Hayes, R.P, Kim, J, Ng, S, Ding, F, Liao, M, Ke, A.
Deposit date:2016-11-23
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.
Cell, 170, 2017
5U07
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BU of 5u07 by Molmil
CRISPR RNA-guided surveillance complex
Descriptor: CRISPR-associated protein, Cas5e family, Cse1 family, ...
Authors:Xiao, Y, Luo, M, Hayes, R.P, Kim, J, Ng, S, Ding, F, Liao, M, Ke, A.
Deposit date:2016-11-23
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.
Cell, 170, 2017
6C66
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BU of 6c66 by Molmil
CRISPR RNA-guided surveillance complex, pre-nicking
Descriptor: CRISPR-associated helicase, Cas3 family, CRISPR-associated protein, ...
Authors:Xiao, Y, Luo, M, Liao, M, Ke, A.
Deposit date:2018-01-17
Release date:2018-06-27
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Structure basis for RNA-guided DNA degradation by Cascade and Cas3.
Science, 361, 2018
3UB0
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BU of 3ub0 by Molmil
Crystal structure of the nonstructural protein 7 and 8 complex of Feline Coronavirus
Descriptor: Non-structural protein 6, nsp6,, Non-structural protein 7, ...
Authors:Xiao, Y, Hilgenfeld, R, Ma, Q.
Deposit date:2011-10-22
Release date:2012-02-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Nonstructural proteins 7 and 8 of feline coronavirus form a 2:1 heterotrimer that exhibits primer-independent RNA polymerase activity.
J.Virol., 86, 2012
3OY7
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BU of 3oy7 by Molmil
Crystal structure of a virus encoded glycosyltransferase in complex with GDP-mannose
Descriptor: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, Glycosyltransferase B736L
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2010-09-23
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Crystal structure of a virus-encoded putative glycosyltransferase.
J.Virol., 84, 2010
3OY2
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BU of 3oy2 by Molmil
Crystal structure of a putative glycosyltransferase from Paramecium bursaria Chlorella virus NY2A
Descriptor: Glycosyltransferase B736L
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2010-09-22
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of a virus-encoded putative glycosyltransferase
J.Virol., 84, 2010
3SUC
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BU of 3suc by Molmil
Crystal structure of the pre-mature bacteriophage phi29 gene product 12
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2011-07-11
Release date:2011-08-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic Insights Into the Autocatalytic Assembly Mechanism of a Bacteriophage Tail Spike
Mol.Cell, 34, 2009
3R04
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BU of 3r04 by Molmil
The discovery of novel benzofuran-2-carboxylic acids as potent Pim-1 inhibitors
Descriptor: 5-{6-[(trans-4-aminocyclohexyl)amino]pyrazin-2-yl}-1-benzofuran-2-carboxylic acid, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase pim-1
Authors:Xiang, Y, Hirth, B, Asmussen, G, Biemann, H.-P, Good, A, Fitzgerald, M, Gladysheva, T, Jancsics, K, Liu, J, Metz, M, Papoulis, A, Skerlj, R, Stepp, D.J, Wei, R.R.
Deposit date:2011-03-07
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The discovery of novel benzofuran-2-carboxylic acids as potent Pim-1 inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011

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数据于2024-06-19公开中

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