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PDB: 14 results

7D47
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BU of 7d47 by Molmil
Crystal structure of SARS-CoV-2 Papain-like protease C111S
Descriptor: CALCIUM ION, Non-structural protein 3, ZINC ION
Authors:Wu, K.-P, Chen, S.-K, Lu, Y.-C, Huang, Y.-C.J, Lee, M.-H.
Deposit date:2020-09-22
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of SARS-CoV-2 Papain-like protease
To Be Published
7WNZ
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BU of 7wnz by Molmil
CryoEM structure of human alpha-synuclein A53T fibril
Descriptor: Alpha-synuclein
Authors:Wu, K.-P, Huang, J.Y.-C.
Deposit date:2022-01-20
Release date:2023-01-25
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Calcium abolishes intramolecular long-range contacts and promotes hereditary alpha-synuclein A53T aggregation
To Be Published
7WO0
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BU of 7wo0 by Molmil
CryoEM structure of human alpha-synuclein A53T fibril induced by calcium ions
Descriptor: Alpha-synuclein
Authors:Wu, K.-P, Huang, J.Y.-C.
Deposit date:2022-01-20
Release date:2023-01-25
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Calcium abolishes intramolecular long-range contacts and promotes hereditary alpha-synuclein A53T aggregation
To Be Published
7YQM
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BU of 7yqm by Molmil
2.9-angstrom cryo-EM structure of Ecoli malate synthase G
Descriptor: Malate synthase G
Authors:Wu, K.-P, Wu, Y.-M, Lu, Y.-C.
Deposit date:2022-08-08
Release date:2023-03-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM reveals the structure and dynamics of a 723-residue malate synthase G.
J.Struct.Biol., 215, 2023
7YQN
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BU of 7yqn by Molmil
Crystal structure of Ecoli malate synthase G
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
Authors:Wu, K.-P, Lu, Y.-C, Ko, T.-P.
Deposit date:2022-08-08
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cryo-EM reveals the structure and dynamics of a 723-residue malate synthase G.
J.Struct.Biol., 215, 2023
5HPS
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BU of 5hps by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1 and UbV P1.1
Descriptor: Ubiquitin variant P1.1, WWP1 HECT
Authors:Wu, K.-P, Mercredi, P.Y, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
5HPK
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BU of 5hpk by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: NEDD4L and UbV NL.1
Descriptor: E3 ubiquitin-protein ligase NEDD4-like, Ubiquitin variant NL.1
Authors:Wu, K.-P, Mukherjee, M, Mercredi, P.Y, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
5HPT
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BU of 5hpt by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: WWP1, Ubv P2.3 and UBCH7
Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP1, Ubiquitin variant P2.3, Ubiquitin-conjugating enzyme E2 L3
Authors:Wu, K.-P, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
5HPL
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BU of 5hpl by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: Rsp5 and UbV R5.4
Descriptor: Rsp5, Ubiquitin variant R5.4
Authors:Wu, K.-P, Kamadurai, H.B, Schulman, B.A.
Deposit date:2016-01-20
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
8JUX
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BU of 8jux by Molmil
Crystal structure of SARS-CoV-2 Papain-like protease complexed with noncovalent inhibitor SR-01
Descriptor: MAGNESIUM ION, Non-structural protein 7, ~{N}-[(3-fluorophenyl)methyl]-1-[(1~{R})-1-(3-methoxynaphthalen-1-yl)ethyl]piperidine-4-carboxamide
Authors:Hsieh, Y.-J, Wu, K.-P.
Deposit date:2023-06-27
Release date:2024-07-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of SARS-CoV-2 Papain-like protease complexed with noncovalent inhibitor SR-01
To Be Published
8JO2
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BU of 8jo2 by Molmil
Structural basis of transcriptional activation by the OmpR/PhoB-family response regulator PmrA
Descriptor: DNA (65-MER), DNA-binding transcriptional regulator BasR, DNA-directed RNA polymerase subunit alpha, ...
Authors:Lou, Y.-C, Huang, H.-Y, Chen, C, Wu, K.-P.
Deposit date:2023-06-06
Release date:2023-08-30
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structural basis of transcriptional activation by the OmpR/PhoB-family response regulator PmrA.
Nucleic Acids Res., 51, 2023
7YAT
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BU of 7yat by Molmil
CryoEM tetra protofilament structure of the hamster prion 108-144 fibril
Descriptor: Major prion protein
Authors:Chen, E.H.-L, Kao, S.-W, Lee, C.-H, Huang, J.Y.C, Chen, R.P.-Y, Wu, K.-P.
Deposit date:2022-06-28
Release date:2022-07-27
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:2.2 angstrom Cryo-EM Tetra-Protofilament Structure of the Hamster Prion 108-144 Fibril Reveals an Ordered Water Channel in the Center.
J.Am.Chem.Soc., 144, 2022
8J0A
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BU of 8j0a by Molmil
Robust design of effective allosteric activator UbV R4 for Rsp5 E3 ligase using the machine-learning tool ProteinMPNN
Descriptor: SULFATE ION, Ubiquitin variant R4
Authors:Lin, Y.-F, Hsieh, Y.-J, Kao, H.-W, Ko, T.-P, Wu, K.-P.
Deposit date:2023-04-10
Release date:2023-08-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Robust Design of Effective Allosteric Activators for Rsp5 E3 Ligase Using the Machine Learning Tool ProteinMPNN.
Acs Synth Biol, 12, 2023
7W85
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BU of 7w85 by Molmil
Structural of the filamentous Escherichia coli glutamine synthetase
Descriptor: Glutamine synthetase, NICKEL (II) ION
Authors:Huang, P.-C, Chen, S.-K, Wu, K.-P.
Deposit date:2021-12-07
Release date:2022-04-06
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural basis for the helical filament formation of Escherichia coli glutamine synthetase.
Protein Sci., 31, 2022

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