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PDB: 47 results

4XCM
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Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus
Descriptor: Cell wall-binding endopeptidase-related protein
Authors:Wong, J, Midtgaard, S, Gysel, K, Thygesen, M.B, Sorensen, K.K, Jensen, K.J, Stougaard, J, Thirup, S, Blaise, M.
Deposit date:2014-12-18
Release date:2015-01-14
Last modified:2018-01-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:An intermolecular binding mechanism involving multiple LysM domains mediates carbohydrate recognition by an endopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
5J9F
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Human GAR transformylase in complex with GAR and (4-{[2-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)ethyl]amino}benzoyl)-L-glutamic acid (AGF183)
Descriptor: GLYCINAMIDE RIBONUCLEOTIDE, N-(4-{[2-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)ethyl]amino}benzene-1-carbonyl)-L-glutamic acid, Trifunctional purine biosynthetic protein adenosine-3
Authors:Wong, J, Deis, S.M, Dann III, C.E.
Deposit date:2016-04-09
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tumor Targeting with Novel 6-Substituted Pyrrolo [2,3-d] Pyrimidine Antifolates with Heteroatom Bridge Substitutions via Cellular Uptake by Folate Receptor alpha and the Proton-Coupled Folate Transporter and Inhibition of de Novo Purine Nucleotide Biosynthesis.
J.Med.Chem., 59, 2016
4S11
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Gelsolin nanobody shielding mutant plasma gelsolin from furin proteolysis
Descriptor: GELSOLIN NANOBODY
Authors:Wongsantichon, J, Loonchanta, A, Robinson, R.C, Gettemans, J.
Deposit date:2015-01-07
Release date:2015-06-03
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:An ER-directed gelsolin nanobody targets the first step in amyloid formation in a gelsolin amyloidosis mouse model.
Hum.Mol.Genet., 24, 2015
4S10
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Gelsolin nanobody shielding mutant plasma gelsolin from furin proteolysis
Descriptor: CALCIUM ION, GELSOLIN NANOBODY, Gelsolin
Authors:Wongsantichon, J, Robinson, R.C, Gettemans, J.
Deposit date:2015-01-07
Release date:2015-06-03
Method:X-RAY DIFFRACTION (2.614 Å)
Cite:An ER-directed gelsolin nanobody targets the first step in amyloid formation in a gelsolin amyloidosis mouse model.
Hum.Mol.Genet., 24, 2015
6IM8
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BU of 6im8 by Molmil
CueO-PM2 multicopper oxidase
Descriptor: Blue copper oxidase CueO,PM2 peptide,Blue copper oxidase CueO
Authors:Wongsantichon, J, Robinson, R, Ghadessy, F.
Deposit date:2018-10-22
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Development and structural characterization of an engineered multi-copper oxidase reporter of protein-protein interactions.
J.Biol.Chem., 294, 2019
6IM9
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MDM2 bound CueO-PM2 sensor
Descriptor: Blue copper oxidase CueO,PM2 peptide,Blue copper oxidase CueO, E3 ubiquitin-protein ligase Mdm2
Authors:Wongsantichon, J, Robinson, R, Ghadessy, F.
Deposit date:2018-10-22
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Development and structural characterization of an engineered multi-copper oxidase reporter of protein-protein interactions.
J.Biol.Chem., 294, 2019
6IM7
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BU of 6im7 by Molmil
CueO-12.1 multicopper oxidase
Descriptor: Blue copper oxidase CueO,12.1 peptide,Blue copper oxidase CueO, CALCIUM ION
Authors:Wongsantichon, J, Robinson, R, Ghadessy, F.
Deposit date:2018-10-22
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Development and structural characterization of an engineered multi-copper oxidase reporter of protein-protein interactions.
J.Biol.Chem., 294, 2019
4YH2
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BU of 4yh2 by Molmil
Glutathione Transferase E6 from Drosophila melanogaster
Descriptor: GLUTATHIONE, Glutathione S transferase E6
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2015-02-26
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Epsilon glutathione transferases possess a unique class-conserved subunit interface motif that directly interacts with glutathione in the active site
Biosci.Rep., 35, 2015
4YJY
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BU of 4yjy by Molmil
Crystal structure of Type III polyketide synthase from Oryza sativa
Descriptor: Chalcone synthase 1
Authors:Wongsantichon, J, Robinson, R.C, Yew, W.S.
Deposit date:2015-03-03
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Synthetic Polyketide Enzymology: Platform for Biosynthesis of Antimicrobial Polyketides
Acs Catalysis, 5, 2015
3F6F
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BU of 3f6f by Molmil
Crystal Structure of Glutathione Transferase dmGSTD10 from Drosophila melanogaster
Descriptor: CG18548-PA (IP02196p) (IP02193p)
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2008-11-06
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural evidence for conformational changes of Delta class glutathione transferases after ligand binding
Arch.Biochem.Biophys., 521, 2012
3F63
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BU of 3f63 by Molmil
Crystal structure of a Delta class GST (adGSTD4-4) from Anopheles dirus, in complex with S-hexyl glutathione
Descriptor: Glutathione transferase GST1-4, S-HEXYLGLUTATHIONE
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2008-11-05
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural contributions of delta class glutathione transferase active-site residues to catalysis
Biochem.J., 428, 2010
3F6D
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BU of 3f6d by Molmil
Crystal Structure of a Genetically Modified Delta Class GST (adGSTD4-4) from Anopheles dirus, F123A, in Complex with S-Hexyl Glutathione
Descriptor: Glutathione transferase GST1-4, S-HEXYLGLUTATHIONE
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2008-11-05
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural contributions of delta class glutathione transferase active-site residues to catalysis
Biochem.J., 428, 2010
3GH6
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BU of 3gh6 by Molmil
Crystal Structure of Glutathione Transferase dmgstd10 from Drosophila melanogaster, in complex with glutathione
Descriptor: CG18548-PA (IP02196p) (IP02193p), GLUTATHIONE
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2009-03-03
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural evidence for conformational changes of Delta class glutathione transferases after ligand binding
Arch.Biochem.Biophys., 521, 2012
5WTS
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BU of 5wts by Molmil
Green fluorescent protein linked MTide-02 inhibitor in complex with mdm2
Descriptor: E3 ubiquitin-protein ligase Mdm2, GLYCEROL, Green fluorescent protein linked MTide-02, ...
Authors:Wongsantichon, J, Robinson, R.C, Ghadessy, F.J.
Deposit date:2016-12-14
Release date:2017-12-20
Last modified:2020-11-25
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Green fluorescent protein linked peptide inhibitor PMI in complex with mdm2
To Be Published
3G7I
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BU of 3g7i by Molmil
Crystal structure of a Delta class GST (adGSTD4-4) from Anopheles dirus, with glutathione complexed in one subunit
Descriptor: GLUTATHIONE, Glutathione transferase GST1-4
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2009-02-10
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural evidence for conformational changes of Delta class glutathione transferases after ligand binding
Arch.Biochem.Biophys., 521, 2012
3G7J
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BU of 3g7j by Molmil
Crystal Structure of a Genetically Modified Delta Class GST (adGSTD4-4) from Anopheles dirus, Y119E, in Complex with S-Hexyl Glutathione
Descriptor: Glutathione transferase GST1-4, S-HEXYLGLUTATHIONE
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2009-02-10
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural contributions of delta class glutathione transferase active-site residues to catalysis
Biochem.J., 428, 2010
3MAK
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BU of 3mak by Molmil
Crystal structure of Glutathione transferase dmGSTD1 from Drosophila melanogaster, in complex with glutathione
Descriptor: GLUTATHIONE, Glutathione S-transferase 1-1
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2010-03-24
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural evidence for conformational changes of Delta class glutathione transferases after ligand binding
Arch.Biochem.Biophys., 521, 2012
4QPO
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BU of 4qpo by Molmil
Mechanistic basis of plasmid-specific DNA binding of the F plasmid regulatory protein, TraM
Descriptor: PHOSPHATE ION, Relaxosome protein TraM
Authors:Peng, Y, Lu, J, Wong, J, Edwards, R.A, Frost, L.S, Glover, J.N.M.
Deposit date:2014-06-24
Release date:2014-09-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Mechanistic Basis of Plasmid-Specific DNA Binding of the F Plasmid Regulatory Protein, TraM.
J.Mol.Biol., 426, 2014
4QPQ
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BU of 4qpq by Molmil
Mechanistic basis of plasmid-specific DNA binding of the F plasmid regulatory protein, TraM
Descriptor: Relaxosome protein TraM, sbmA DNA1, sbmA DNA2
Authors:Peng, Y, Lu, J, Wong, J, Edwards, R.A, Frost, L.S, Glover, J.N.M.
Deposit date:2014-06-24
Release date:2014-09-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.106 Å)
Cite:Mechanistic Basis of Plasmid-Specific DNA Binding of the F Plasmid Regulatory Protein, TraM.
J.Mol.Biol., 426, 2014
5IAY
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BU of 5iay by Molmil
NMR structure of UHRF1 Tandem Tudor Domains in a complex with Spacer peptide
Descriptor: E3 ubiquitin-protein ligase UHRF1, Spacer
Authors:Fang, J, Cheng, J, Wang, J, Zhang, Q, Liu, M, Gong, R, Wang, P, Zhang, X, Feng, Y, Lan, W, Gong, Z, Tang, C, Wong, J, Yang, H, Cao, C, Xu, Y.
Deposit date:2016-02-22
Release date:2016-04-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Hemi-methylated DNA opens a closed conformation of UHRF1 to facilitate its histone recognition
Nat Commun, 7, 2016
4PW6
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BU of 4pw6 by Molmil
structure of UHRF2-SRA in complex with a 5hmC-containing DNA, complex II
Descriptor: 5hmC-containing DNA1, 5hmC-containing DNA2, E3 ubiquitin-protein ligase UHRF2
Authors:Zhou, T, Xiong, J, Wang, M, Yang, N, Wong, J, Zhu, B, Xu, R.M.
Deposit date:2014-03-18
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.789 Å)
Cite:Structural Basis for Hydroxymethylcytosine Recognition by the SRA Domain of UHRF2.
Mol.Cell, 54, 2014
4PW5
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BU of 4pw5 by Molmil
structure of UHRF2-SRA in complex with a 5hmC-containing DNA, complex I
Descriptor: 5hmC-containing DNA1, 5hmC-containing DNA2, E3 ubiquitin-protein ligase UHRF2
Authors:ZHou, T, Xiong, J, Wang, M, Yang, N, Wong, J, Zhu, B, Xu, R.M.
Deposit date:2014-03-18
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Structural Basis for Hydroxymethylcytosine Recognition by the SRA Domain of UHRF2.
Mol.Cell, 54, 2014
4PW7
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BU of 4pw7 by Molmil
structure of UHRF2-SRA in complex with a 5mC-containing DNA
Descriptor: 5mC-containing DNA1, 5mC-containing DNA2, E3 ubiquitin-protein ligase UHRF2
Authors:ZHou, T, Xiong, J, Wang, M, Yang, N, Wong, J, Zhu, B, Xu, R.M.
Deposit date:2014-03-19
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural Basis for Hydroxymethylcytosine Recognition by the SRA Domain of UHRF2.
Mol.Cell, 54, 2014
8QUQ
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BU of 8quq by Molmil
Crystal structure of Ompk36 GD at 3500 eV based on spherical harmonics absorption corrections
Descriptor: OmpK36, SULFATE ION
Authors:Duman, R, Wagner, A, Beis, K, Wong, J.
Deposit date:2023-10-16
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Ray-tracing analytical absorption correction for X-ray crystallography based on tomographic reconstructions.
J.Appl.Crystallogr., 57, 2024
8QUR
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BU of 8qur by Molmil
Crystal structure of Ompk36 GD at 3500 eV with no absorption corrections
Descriptor: OmpK36, SULFATE ION
Authors:Duman, R, Wagner, A, Beis, K, Wong, J.
Deposit date:2023-10-16
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Ray-tracing analytical absorption correction for X-ray crystallography based on tomographic reconstructions.
J.Appl.Crystallogr., 57, 2024

 

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