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PDB: 359 results

1SN7
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KUMAMOLISIN-AS, APOENZYME
Descriptor: CALCIUM ION, kumamolisin-As
Authors:Wlodawer, A, Li, M, Gustchina, A, Oda, K, Nishino, T.
Deposit date:2004-03-10
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and biochemical investigations of kumamolisin-as, a serine-carboxyl peptidase with collagenase activity.
J.Biol.Chem., 279, 2004
9CBE
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BU of 9cbe by Molmil
Structure of a type III antifreeze protein isoform HPLC12 re-refined using standard protocols
Descriptor: Type-3 ice-structuring protein HPLC 12
Authors:Wlodawer, A, Dauter, Z.
Deposit date:2024-06-19
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:In some cases more complicated approaches to refinement of macromolecular structures are not necessary.
Iucrj, 11, 2024
2ION
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BU of 2ion by Molmil
Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form2
Descriptor: GLYCEROL, Programmed Cell Death 4, Pdcd4
Authors:Wlodawer, A, LaRonde-LeBlanc, N.A.
Deposit date:2006-10-10
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural basis for inhibition of translation by the tumor suppressor pdcd4.
Mol.Cell.Biol., 27, 2007
2IOL
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BU of 2iol by Molmil
Crystal structure of the C-terminal MA3 domain of Pdcd4 (mouse); form 1
Descriptor: Programmed Cell Death 4, Pdcd4
Authors:Wlodawer, A, LaRonde-LeBlanc, N.A.
Deposit date:2006-10-10
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for inhibition of translation by the tumor suppressor pdcd4.
Mol.Cell.Biol., 27, 2007
1ZTH
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BU of 1zth by Molmil
Crystal Structure of A.fulgidus Rio1 serine protein kinase bound to ADP and Manganese ion
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, Rio1 serine protein kinase
Authors:Wlodawer, A, LaRonde-LeBlanc, N.
Deposit date:2005-05-27
Release date:2005-07-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and activity of the atypical serine kinase Rio1.
Febs J., 272, 2005
1ZTF
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Crystal Structure of A.fulgidus Rio1 serine protein kinase
Descriptor: 2-(6-AMINO-OCTAHYDRO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Rio1 serine protein kinase
Authors:Wlodawer, A, LaRonde-LeBlanc, N.
Deposit date:2005-05-26
Release date:2005-07-19
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure and activity of the atypical serine kinase Rio1.
Febs J., 272, 2005
5VEQ
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BU of 5veq by Molmil
MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2Y
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VEH
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BU of 5veh by Molmil
Re-refinement OF THE PDB STRUCTURE 1yiz of Aedes aegypti kynurenine aminotransferase
Descriptor: BROMIDE ION, GLYCEROL, Kynurenine aminotransferase
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-04
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VEP
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MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2F
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
6DWF
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Crystal structure of complex of BBKI mutant, L55R with Bovine Trypsin
Descriptor: Cationic trypsin, Kunitz-type inihibitor
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2018-06-26
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structures of the complex of a kallikrein inhibitor from Bauhinia bauhinioides with trypsin and modeling of kallikrein complexes.
Acta Crystallogr D Struct Biol, 75, 2019
8HVP
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BU of 8hvp by Molmil
STRUCTURE AT 2.5-ANGSTROMS RESOLUTION OF CHEMICALLY SYNTHESIZED HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 PROTEASE COMPLEXED WITH A HYDROXYETHYLENE*-BASED INHIBITOR
Descriptor: HIV-1 PROTEASE, INHIBITOR VAL-SER-GLN-ASN-LEU-PSI(CH(OH)-CH2)-VAL-ILE-VAL (U-85548E)
Authors:Jaskolski, M, Miller, M, Tomasselli, A.G, Sawyer, T.K, Staples, D.G, Heinrikson, R.L, Schneider, J, Kent, S.B.H, Wlodawer, A.
Deposit date:1990-10-26
Release date:1993-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure at 2.5-A resolution of chemically synthesized human immunodeficiency virus type 1 protease complexed with a hydroxyethylene-based inhibitor.
Biochemistry, 30, 1991
1N00
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BU of 1n00 by Molmil
Annexin Gh1 from cotton
Descriptor: SULFATE ION, annexin Gh1
Authors:Hofmann, A, Delmer, D.P, Wlodawer, A.
Deposit date:2002-10-10
Release date:2003-06-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of annexin Gh1 from Gossypium hirsutum reveals an unusual S3 cluster.
Eur.J.Biochem., 270, 2003
1N1F
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BU of 1n1f by Molmil
Crystal Structure of Human Interleukin-19
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, interleukin-19
Authors:Chang, C, Magracheva, E, Kozlov, S, Fong, S, Tobin, G, Kotenko, S, Wlodawer, A, Zdanov, A.
Deposit date:2002-10-17
Release date:2003-02-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of interleukin-19 defines a new subfamily of helical cytokines
J.Biol.Chem., 278, 2003
7HVP
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X-RAY CRYSTALLOGRAPHIC STRUCTURE OF A COMPLEX BETWEEN A SYNTHETIC PROTEASE OF HUMAN IMMUNODEFICIENCY VIRUS 1 AND A SUBSTRATE-BASED HYDROXYETHYLAMINE INHIBITOR
Descriptor: HIV-1 PROTEASE, INHIBITOR ACE-SER-LEU-ASN-PHE-PSI(CH(OH)-CH2N)-PRO-ILE VME (JG-365)
Authors:Swain, A.L, Miller, M.M, Green, J, Rich, D.H, Schneider, J, Kent, S.B.H, Wlodawer, A.
Deposit date:1990-09-13
Release date:1993-07-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystallographic structure of a complex between a synthetic protease of human immunodeficiency virus 1 and a substrate-based hydroxyethylamine inhibitor.
Proc.Natl.Acad.Sci.USA, 87, 1990
1EMM
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BU of 1emm by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Palm, G, Zdanov, A, Wlodawer, A.
Deposit date:1997-03-31
Release date:1997-08-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structural basis for spectral variations in green fluorescent protein.
Nat.Struct.Biol., 4, 1997
1EML
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BU of 1eml by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Palm, G, Zdanov, A, Wlodawer, A.
Deposit date:1997-03-31
Release date:1997-08-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structural basis for spectral variations in green fluorescent protein.
Nat.Struct.Biol., 4, 1997
1EMC
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BU of 1emc by Molmil
GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Palm, G, Zdanov, A, Wlodawer, A.
Deposit date:1997-03-31
Release date:1997-08-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structural basis for spectral variations in green fluorescent protein.
Nat.Struct.Biol., 4, 1997
6RIZ
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BU of 6riz by Molmil
Crystal structure of gp41-1 intein (C1A, F65W, D107C)
Descriptor: gp41-1 intein
Authors:Beyer, H.M, Lountos, G.T, Mikula, M.K, Wlodawer, A, Iwai, H.
Deposit date:2019-04-25
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Convergence of the Hedgehog/Intein Fold in Different Protein Splicing Mechanisms.
Int J Mol Sci, 21, 2020
2GTY
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BU of 2gty by Molmil
Crystal structure of unliganded griffithsin
Descriptor: 1,2-ETHANEDIOL, Griffithsin, SULFATE ION
Authors:Ziolkowska, N.E, Wlodawer, A.
Deposit date:2006-04-28
Release date:2006-08-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Domain-swapped structure of the potent antiviral protein griffithsin and its mode of carbohydrate binding.
Structure, 14, 2006
4RLD
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BU of 4rld by Molmil
Crystal structure of kkf mutant of bla G 2 protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aspartic protease Bla g 2, ZINC ION
Authors:Li, M, Gustchina, A, Pomes, A, Wlodawer, A.
Deposit date:2014-10-16
Release date:2015-10-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:to be determined
To be Published
6FIV
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STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR
Descriptor: RETROPEPSIN, SULFATE ION, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Li, M, Lee, T, Morris, G, Laco, G, Wong, C, Olson, A, Elder, J, Wlodawer, A, Gustchina, A.
Deposit date:1998-12-02
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease
Proteins, 38, 2000
7UT3
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BU of 7ut3 by Molmil
Crystal structure of complex of Fab, G10C with GalNAc-pNP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-galactopyranoside, Fab protein heavy chain, ...
Authors:Li, M, Wlodawer, A.
Deposit date:2022-04-26
Release date:2022-09-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Development of a GalNAc-Tyrosine-Specific Monoclonal Antibody and Detection of Tyrosine O -GalNAcylation in Numerous Human Tissues and Cell Lines.
J.Am.Chem.Soc., 144, 2022
8RSA
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BU of 8rsa by Molmil
CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A
Descriptor: 3'-DEOXY-3'-ACETAMIDO-THYMIDINE, RIBONUCLEASE A
Authors:Nachman, J, Wlodawer, A.
Deposit date:1989-08-28
Release date:1991-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of two covalent nucleoside derivatives of ribonuclease A.
Biochemistry, 29, 1990
7UPZ
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Structural basis for cell type specific DNA binding of C/EBPbeta: the case of cell cycle inhibitor p15INK4b promoter
Descriptor: CCAAT/enhancer-binding protein beta, DNA (5'-D(*AP*TP*TP*CP*TP*TP*AP*AP*GP*AP*AP*AP*GP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*CP*TP*TP*TP*CP*TP*TP*AP*AP*GP*AP*A)-3')
Authors:Lountos, G.T, Cherry, S, Tropea, J.E, Wlodawer, A, Miller, M.
Deposit date:2022-04-18
Release date:2022-11-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural basis for cell type specific DNA binding of C/EBP beta : The case of cell cycle inhibitor p15INK4b promoter.
J.Struct.Biol., 214, 2022
5L04
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BU of 5l04 by Molmil
STRUCTURE OF INTERFERON LAMBDA 1 RECEPTOR WITH HUMAN KINASE JAK1
Descriptor: Interferon lambda receptor 1, Tyrosine-protein kinase JAK1
Authors:Lubkowski, J, Wlodawer, A, Zhang, D.
Deposit date:2016-07-26
Release date:2016-10-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Complex of the Intracellular Domain of Interferon lambda Receptor 1 (IFNLR1) and the FERM/SH2 Domains of Human JAK1.
J. Mol. Biol., 428, 2016

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