Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42 results

3FW7
DownloadVisualize
BU of 3fw7 by Molmil
Structure of berberine bridge enzyme, H104A variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2009-01-17
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.825 Å)
Cite:Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3FWA
DownloadVisualize
BU of 3fwa by Molmil
Structure of berberine bridge enzyme, C166A variant in complex with (S)-reticuline
Descriptor: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2009-01-17
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3FW8
DownloadVisualize
BU of 3fw8 by Molmil
Structure of berberine bridge enzyme, C166A variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2009-01-17
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3FW9
DownloadVisualize
BU of 3fw9 by Molmil
Structure of berberine bridge enzyme in complex with (S)-scoulerine
Descriptor: (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2009-01-17
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.489 Å)
Cite:Structural roles of biocovalent flaninylation in berberine bridge enzyme
to be published
3D2D
DownloadVisualize
BU of 3d2d by Molmil
Structure of berberine bridge enzyme in complex with (S)-reticuline
Descriptor: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K.
Deposit date:2008-05-08
Release date:2008-10-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
5EFW
DownloadVisualize
BU of 5efw by Molmil
Crystal structure of LOV2-Zdk1 - the complex of oat LOV2 and the affibody protein Zdark1
Descriptor: FLAVIN MONONUCLEOTIDE, NPH1-1, SULFATE ION, ...
Authors:Winkler, A, Wang, H, Hartmann, E, Hahn, K, Schlichting, I.
Deposit date:2015-10-26
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:LOVTRAP: an optogenetic system for photoinduced protein dissociation.
Nat.Methods, 13, 2016
3D2H
DownloadVisualize
BU of 3d2h by Molmil
Structure of berberine bridge enzyme from Eschscholzia californica, monoclinic crystal form
Descriptor: (2R,3S,4S)-5-[(4R)-6',7'-dimethyl-2,3',5-trioxo-1'H-spiro[imidazolidine-4,2'-quinoxalin]-4'(3'H)-yl]-2,3,4-trihydroxypentyl-adenosine diphosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K.
Deposit date:2008-05-08
Release date:2008-10-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
3D2J
DownloadVisualize
BU of 3d2j by Molmil
Structure of berberine bridge enzyme from Eschscholzia californica, tetragonal crystal form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Winkler, A, Lyskowski, A, Macheroux, P, Gruber, K.
Deposit date:2008-05-08
Release date:2008-10-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A concerted mechanism for berberine bridge enzyme
Nat.Chem.Biol., 4, 2008
3GSY
DownloadVisualize
BU of 3gsy by Molmil
Structure of berberine bridge enzyme in complex with dehydroscoulerine
Descriptor: 2,9-dihydroxy-3,10-dimethoxy-5,6-dihydroisoquino[3,2-a]isoquinolinium, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2009-03-27
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Berberine bridge enzyme catalyzes the six electron oxidation of (S)-reticuline to dehydroscoulerine.
Phytochemistry, 70, 2009
4J2P
DownloadVisualize
BU of 4j2p by Molmil
Crystal structure of LuxF from Photobacterium leiognathi
Descriptor: Non-fluorescent flavoprotein
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2013-02-05
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical properties of LuxF from Photobacterium leiognathi.
Biochim. Biophys. Acta, 1854, 2015
4HH1
DownloadVisualize
BU of 4hh1 by Molmil
Dark-state structure of AppA wild-type without the Cys-rich region from Rb. sphaeroides
Descriptor: AppA protein, FLAVIN MONONUCLEOTIDE
Authors:Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
Deposit date:2012-10-09
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4EC3
DownloadVisualize
BU of 4ec3 by Molmil
Structure of berberine bridge enzyme, H174A variant in complex with (S)-reticuline
Descriptor: (S)-reticuline, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Winkler, A, Macheroux, P, Gruber, K.
Deposit date:2012-03-26
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6501 Å)
Cite:Catalytic and structural role of a conserved active site histidine in berberine bridge enzyme.
Biochemistry, 51, 2012
4HH2
DownloadVisualize
BU of 4hh2 by Molmil
Structure of PpsR without the HTH motif from Rb. sphaeroides
Descriptor: Transcriptional regulator, PpsR
Authors:Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
Deposit date:2012-10-09
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4HH0
DownloadVisualize
BU of 4hh0 by Molmil
Dark-state structure of AppA C20S without the Cys-rich region from Rb. sphaeroides
Descriptor: AppA protein, CHLORIDE ION, FLAVIN MONONUCLEOTIDE
Authors:Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
Deposit date:2012-10-09
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
4HH3
DownloadVisualize
BU of 4hh3 by Molmil
Structure of the AppA-PpsR2 core complex from Rb. sphaeroides
Descriptor: AppA protein, Transcriptional regulator, PpsR
Authors:Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I.
Deposit date:2012-10-09
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression.
Nat.Struct.Mol.Biol., 20, 2013
5MBD
DownloadVisualize
BU of 5mbd by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-11-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBJ
DownloadVisualize
BU of 5mbj by Molmil
Structure of a bacterial light-regulated adenylyl cyclase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, FLAVIN MONONUCLEOTIDE
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-11-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBE
DownloadVisualize
BU of 5mbe by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, FLAVIN MONONUCLEOTIDE
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-11-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBH
DownloadVisualize
BU of 5mbh by Molmil
Structure of a bacterial light-regulated adenylyl cyclase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, FLAVIN MONONUCLEOTIDE
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-11-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBG
DownloadVisualize
BU of 5mbg by Molmil
Structure of a bacterial light-regulated adenylyl cyclase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, IODIDE ION
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-11-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
5MBC
DownloadVisualize
BU of 5mbc by Molmil
Structure of a bacterial light-regulated adenylyl cylcase
Descriptor: Beta subunit of photoactivated adenylyl cyclase, CHLORIDE ION, FLAVIN MONONUCLEOTIDE
Authors:Lindner, R, Hartmann, E, Tarnawski, M, Winkler, A, Frey, D, Reinstein, J, Meinhart, A, Schlichting, I.
Deposit date:2016-11-08
Release date:2017-04-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.
J. Mol. Biol., 429, 2017
6EO4
DownloadVisualize
BU of 6eo4 by Molmil
Physcomitrella patens BBE-like 1 wild-type
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PpBBE-like 1
Authors:Toplak, M, Winkler, A, Macheroux, P.
Deposit date:2017-10-09
Release date:2018-04-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The single berberine bridge enzyme homolog of Physcomitrella patens is a cellobiose oxidase.
FEBS J., 285, 2018
6ET7
DownloadVisualize
BU of 6et7 by Molmil
Activated heterodimer of the bacteriophytochrome regulated diguanylyl cyclase variant - S505V A526V - from Idiomarina species A28L
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, CHLORIDE ION, Diguanylate cyclase (GGDEF) domain-containing protein
Authors:Gourinchas, G, Winkler, A.
Deposit date:2017-10-25
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.852 Å)
Cite:Asymmetric activation mechanism of a homodimeric red light regulated photoreceptor.
Elife, 7, 2018
7JFY
DownloadVisualize
BU of 7jfy by Molmil
GAS41 YEATS domain in complex with 5
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, N-(5-{3-[(2S)-1,3-thiazolidin-2-yl]azetidine-1-carbonyl}thiophen-2-yl)-L-prolinamide, ...
Authors:Linhares, B.M, Listunov, D, Winkler, A, Grembecka, J, Cierpicki, T.
Deposit date:2020-07-17
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.100557 Å)
Cite:GAS41 YEATS domain in complex with 5
To Be Published
8C05
DownloadVisualize
BU of 8c05 by Molmil
LOV-activated diguanylate cyclase, dark-state structure
Descriptor: DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, ...
Authors:Vide, U, Winkler, A.
Deposit date:2022-12-15
Release date:2023-07-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Illuminating the inner workings of a natural protein switch: Blue-light sensing in LOV-activated diguanylate cyclases.
Sci Adv, 9, 2023

 

12>

225158

数据于2024-09-18公开中

PDB statisticsPDBj update infoContact PDBjnumon