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PDB: 97 results

6ZQQ
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BU of 6zqq by Molmil
Structure of the Pmt3-MIR domain with bound ligands
Descriptor: GLYCEROL, PMT3 isoform 1
Authors:Wild, K, Chiapparino, A, Hackmann, Y, Mortensen, S, Sinning, I.
Deposit date:2020-07-10
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Functional implications of MIR domains in protein O -mannosylation.
Elife, 9, 2020
6ZQP
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BU of 6zqp by Molmil
Structure of the Pmt2-MIR domain with bound ligands
Descriptor: GLYCEROL, PMT2 isoform 1, SULFATE ION, ...
Authors:Wild, K, Chiapparino, A, Hackmann, Y, Mortensen, S, Sinning, I.
Deposit date:2020-07-10
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Functional implications of MIR domains in protein O -mannosylation.
Elife, 9, 2020
6SXO
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BU of 6sxo by Molmil
Cryo-EM structure of the human Ebp1-ribosome complex
Descriptor: 28S ribosomal RNA including ES27L-B (2839-3265), 5.8S ribosomal RNA, 60S ribosomal protein L19, ...
Authors:Wild, K, Aleksic, M, Pfeffer, M, Sinning, I.
Deposit date:2019-09-26
Release date:2020-02-19
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:MetAP-like Ebp1 occupies the human ribosomal tunnel exit and recruits flexible rRNA expansion segments.
Nat Commun, 11, 2020
5L3Q
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BU of 5l3q by Molmil
Structure of the GTPase heterodimer of human SRP54 and SRalpha
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Wild, K, Segnitz, B, Sinning, I.
Deposit date:2016-05-24
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex.
J.Mol.Biol., 428, 2016
3KTW
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BU of 3ktw by Molmil
Crystal structure of the SRP19/S-domain SRP RNA complex of Sulfolobus solfataricus
Descriptor: MAGNESIUM ION, POTASSIUM ION, SRP RNA, ...
Authors:Wild, K, Bange, G, Bozkurt, G, Sinning, I.
Deposit date:2009-11-26
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into the assembly of the human and archaeal signal recognition particles.
Acta Crystallogr.,Sect.D, 66, 2010
3KTV
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BU of 3ktv by Molmil
Crystal structure of the human SRP19/S-domain SRP RNA complex
Descriptor: MAGNESIUM ION, POTASSIUM ION, SRP RNA, ...
Authors:Wild, K, Bange, G, Bozkurt, G, Sinning, I.
Deposit date:2009-11-26
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural insights into the assembly of the human and archaeal signal recognition particles.
Acta Crystallogr.,Sect.D, 66, 2010
3VTK
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BU of 3vtk by Molmil
THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE 1 IN COMPLEX WITH ADP AND 5-IODO-DEOXYURIDINE-MONOPHOSPHATE
Descriptor: 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, THYMIDINE KINASE
Authors:Wild, K, Schulz, G.E.
Deposit date:1997-04-01
Release date:1997-10-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structures of thymidine kinase from herpes simplex virus type 1 in complex with substrates and a substrate analogue.
Protein Sci., 6, 1997
2VTK
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BU of 2vtk by Molmil
THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE 1 IN COMPLEX WITH ADP AND DEOXYTHYMIDINE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, THYMIDINE, THYMIDINE KINASE
Authors:Wild, K, Schulz, G.E.
Deposit date:1997-04-01
Release date:1997-10-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structures of thymidine kinase from herpes simplex virus type 1 in complex with substrates and a substrate analogue.
Protein Sci., 6, 1997
4JFN
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BU of 4jfn by Molmil
Crystal structure of the N-terminal, growth factor-like domain of the amyloid precursor protein bound to copper
Descriptor: Amyloid beta A4 protein, COPPER (II) ION, GLYCEROL
Authors:Wild, K, Baumkotter, F, Kins, S.
Deposit date:2013-02-28
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Amyloid precursor protein dimerization and synaptogenic function depend on copper binding to the growth factor-like domain
J.Neurosci., 34, 2014
1VTK
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BU of 1vtk by Molmil
THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE 1 IN COMPLEX WITH ADP AND DEOXYTHYMIDINE-MONOPHOSPHATE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, THYMIDINE KINASE, THYMIDINE-5'-PHOSPHATE
Authors:Wild, K, Schulz, G.E.
Deposit date:1997-04-01
Release date:1997-10-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structures of thymidine kinase from herpes simplex virus type 1 in complex with substrates and a substrate analogue.
Protein Sci., 6, 1997
1JID
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BU of 1jid by Molmil
Human SRP19 in complex with helix 6 of Human SRP RNA
Descriptor: HELIX 6 OF HUMAN SRP RNA, MAGNESIUM ION, SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN
Authors:Wild, K, Sinning, I, Cusack, S.
Deposit date:2001-07-02
Release date:2001-10-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of an early protein-RNA assembly complex of the signal recognition particle.
Science, 294, 2001
1ZAK
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BU of 1zak by Molmil
ADENYLATE KINASE FROM MAIZE IN COMPLEX WITH THE INHIBITOR P1,P5-BIS(ADENOSINE-5'-)PENTAPHOSPHATE (AP5A)
Descriptor: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Wild, K, Schulz, G.E.
Deposit date:1997-05-31
Release date:1998-04-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure, catalysis and supramolecular assembly of adenylate kinase from maize.
Eur.J.Biochem., 250, 1997
1D4R
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BU of 1d4r by Molmil
29-mer fragment of human srp rna helix 6
Descriptor: 29-MER OF MODIFIED SRP RNA HELIX 6, MAGNESIUM ION
Authors:Wild, K, Weichenrieder, O, Leonard, G.A, Cusack, S.
Deposit date:1999-10-05
Release date:1999-12-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2 A structure of helix 6 of the human signal recognition particle RNA
Structure Fold.Des., 7, 1999
8OO0
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BU of 8oo0 by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S0, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
5N1A
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BU of 5n1a by Molmil
Crystal structure of Utp4 from Chaetomium thermophilum
Descriptor: utp4
Authors:Calvino, F.R, Ahmed, Y.L, Wild, K, Sinning, I.
Deposit date:2017-02-05
Release date:2017-06-14
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for 5'-ETS recognition by Utp4 at the early stages of ribosome biogenesis.
PLoS ONE, 12, 2017
8ONZ
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BU of 8onz by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L25-like protein, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
3UI2
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BU of 3ui2 by Molmil
Crystal structure of the cpSRP54 tail bound to cpSRP43
Descriptor: Signal recognition particle 43 kDa protein, chloroplastic, Signal recognition particle 54 kDa protein
Authors:Holdermann, I, Wild, K, Sinning, I.
Deposit date:2011-11-04
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.178 Å)
Cite:Chromodomains read the arginine code of post-translational targeting.
Nat.Struct.Mol.Biol., 19, 2012
4UE4
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BU of 4ue4 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
Descriptor: 6S RNA, FTSQ SIGNAL SEQUENCE, SIGNAL RECOGNITION PARTICLE PROTEIN
Authors:Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
Deposit date:2014-12-15
Release date:2015-09-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
4UE5
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BU of 4ue5 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
Descriptor: 7S RNA, SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN, ...
Authors:Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
Deposit date:2014-12-15
Release date:2015-09-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
7OLD
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BU of 7old by Molmil
Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
Descriptor: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ...
Authors:Kisonaite, M, Wild, K, Sinning, I.
Deposit date:2021-05-19
Release date:2022-01-26
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (3 Å)
Cite:High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation.
Nat Commun, 13, 2022
7OLC
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BU of 7olc by Molmil
Thermophilic eukaryotic 80S ribosome at idle POST state
Descriptor: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ...
Authors:Kisonaite, M, Wild, K, Sinning, I.
Deposit date:2021-05-19
Release date:2022-01-26
Last modified:2022-04-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation.
Nat Commun, 13, 2022
6Y32
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BU of 6y32 by Molmil
Structure of the GTPase heterodimer of human SRP54 and SRalpha
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, SULFATE ION, ...
Authors:Juaire, K.D, Becker, M.M.M, Wild, K, Sinning, I.
Deposit date:2020-02-17
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Functional Impact of SRP54 Mutations Causing Severe Congenital Neutropenia.
Structure, 29, 2021
7Q72
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BU of 7q72 by Molmil
Structure of Pla1 in complex with Red1
Descriptor: NURS complex subunit red1, Poly(A) polymerase pla1
Authors:Soni, K, Wild, K, Sinning, I.
Deposit date:2021-11-09
Release date:2022-12-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023
7Q73
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BU of 7q73 by Molmil
Structure of Pla1 apo
Descriptor: GLYCEROL, Poly(A) polymerase pla1
Authors:Soni, K, Wild, K, Sinning, I.
Deposit date:2021-11-09
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023
7Q74
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BU of 7q74 by Molmil
Structure of Pla1 apo, with a C-terminal deletion
Descriptor: Poly(A) polymerase pla1
Authors:Soni, K, Wild, K, Sinning, I.
Deposit date:2021-11-09
Release date:2022-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023

 

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