Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 140 results

2X4K
DownloadVisualize
BU of 2x4k by Molmil
Crystal structure of SAR1376, a putative 4-oxalocrotonate tautomerase from the methicillin-resistant Staphylococcus aureus (MRSA)
Descriptor: 4-OXALOCROTONATE TAUTOMERASE, ACETATE ION, PHOSPHATE ION, ...
Authors:Oke, M, Carter, L.G, Johnson, K.A, Liu, H, Mcmahon, S.A, White, M.F, Naismith, J.H.
Deposit date:2010-02-01
Release date:2010-07-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
2BDM
DownloadVisualize
BU of 2bdm by Molmil
Structure of Cytochrome P450 2B4 with Bound Bifonazole
Descriptor: 1-[PHENYL-(4-PHENYLPHENYL)-METHYL]IMIDAZOLE, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, ...
Authors:Zhao, Y, White, M.A, Muralidhara, B.K, Sun, L, Halpert, J.R, Stout, C.D.
Deposit date:2005-10-20
Release date:2005-12-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of microsomal cytochrome P450 2B4 complexed with the antifungal drug bifonazole: insight into P450 conformational plasticity and membrane interaction.
J.Biol.Chem., 281, 2006
1HH1
DownloadVisualize
BU of 1hh1 by Molmil
THE STRUCTURE OF HJC, A HOLLIDAY JUNCTION RESOLVING ENZYME FROM SULFOLOBUS SOLFATARICUS
Descriptor: HOLLIDAY JUNCTION RESOLVING ENZYME HJC
Authors:Bond, C.S, Kvaratskhelia, M, Richard, D, White, M.F, Hunter, W.N.
Deposit date:2000-12-18
Release date:2001-04-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of Hjc, a Holliday Junction Resolvase, from Sulfolobus Solfataricus
Proc.Natl.Acad.Sci.USA, 98, 2001
1PXZ
DownloadVisualize
BU of 1pxz by Molmil
1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen
Descriptor: Major pollen allergen Jun a 1
Authors:Czerwinski, E.W, White, M.A, Midoro-Horiuti, T, Brooks, E.G, Goldblum, R.M.
Deposit date:2003-07-07
Release date:2004-11-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Jun a 1, the major cedar pollen allergen from Juniperus ashei, reveals a parallel beta-helical core.
J.Biol.Chem., 280, 2005
6BBD
DownloadVisualize
BU of 6bbd by Molmil
Structure of N-glycosylated porcine surfactant protein-D complexed with glycerol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
Deposit date:2017-10-18
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
6BBE
DownloadVisualize
BU of 6bbe by Molmil
Structure of N-glycosylated porcine surfactant protein-D
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
Deposit date:2017-10-18
Release date:2018-05-23
Last modified:2021-03-24
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
2W0M
DownloadVisualize
BU of 2w0m by Molmil
Crystal Structure of sso2452 from Sulfolobus solfataricus P2
Descriptor: PYROPHOSPHATE 2-, SSO2452, ZINC ION
Authors:McRobbie, A, Carter, L, Johnson, K.A, Kerou, M, Liu, H, Mcmahon, S, Oke, M, Naismith, J.H, White, M.F.
Deposit date:2008-08-19
Release date:2009-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Characterisation of a Conserved Archaeal Rada Paralog with Antirecombinase Activity.
J.Mol.Biol., 389, 2009
6SCF
DownloadVisualize
BU of 6scf by Molmil
A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Athukoralage, J.S, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity.
Nature, 577, 2020
1Z66
DownloadVisualize
BU of 1z66 by Molmil
NMR solution structure of domain III of E-protein of tick-borne Langat flavivirus (no RDC restraints)
Descriptor: Major envelope protein E
Authors:Mukherjee, M, Dutta, K, White, M.A, Cowburn, D, Fox, R.O.
Deposit date:2005-03-21
Release date:2006-03-28
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR solution structure and backbone dynamics of domain III of the E protein of tick-borne Langat flavivirus suggests a potential site for molecular recognition.
Protein Sci., 15, 2006
2VL7
DownloadVisualize
BU of 2vl7 by Molmil
Structure of S. tokodaii Xpd4
Descriptor: PHOSPHATE ION, XPD
Authors:Naismith, J.H, Johnson, K.A, Oke, M, McMahon, S.A, Liu, L, White, M.F, Zawadski, M, Carter, L.G.
Deposit date:2008-01-08
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of the DNA Repair Helicase Xpd.
Cell(Cambridge,Mass.), 133, 2008
2IVY
DownloadVisualize
BU of 2ivy by Molmil
Crystal structure of hypothetical protein sso1404 from Sulfolobus solfataricus P2
Descriptor: HYPOTHETICAL PROTEIN SSO1404
Authors:Yan, X, Carter, L.G, Dorward, M, Liu, H, McMahon, S.A, Oke, M, Powers, H, White, M.F, Naismith, J.H.
Deposit date:2006-06-22
Release date:2006-06-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
2VA8
DownloadVisualize
BU of 2va8 by Molmil
DNA Repair Helicase Hel308
Descriptor: SKI2-TYPE HELICASE, SULFATE ION
Authors:Johnson, K.A, Richards, J, Liu, H, McMahon, S, Oke, M, Carter, L, Naismith, J.H, White, M.F.
Deposit date:2007-08-30
Release date:2008-01-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the DNA Repair Helicase Hel308 Reveals DNA Binding and Autoinhibitory Domains.
J.Biol.Chem., 283, 2008
6SCE
DownloadVisualize
BU of 6sce by Molmil
Structure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Zhu, W, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2020-02-19
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure and mechanism of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate.
Nat Commun, 11, 2020
1HQQ
DownloadVisualize
BU of 1hqq by Molmil
MINIPROTEIN MP-2 (M9A) COMPLEX WITH STREPTAVIDIN
Descriptor: MP-2, STREPTAVIDIN
Authors:Yang, H.W, Liu, D.Q, Fan, X, White, M.A, Fox, R.O.
Deposit date:2000-12-19
Release date:2003-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational Ensemble Analysis of Ligand Binding in Streptavidin Mini-protein Complexes
To be Published
2W02
DownloadVisualize
BU of 2w02 by Molmil
Co-complex Structure of Achromobactin Synthetase Protein D (AcsD) with ATP from Pectobacterium Chrysanthemi
Descriptor: ACSD, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Schmelz, S, McMahon, S.A, Kadi, N, Song, L, Oves-Costales, D, Oke, M, Liu, H, Johnson, K.A, Carter, L, White, M.F, Challis, G.L, Naismith, J.H.
Deposit date:2008-08-08
Release date:2009-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis.
Nat. Chem. Biol., 5, 2009
2HWK
DownloadVisualize
BU of 2hwk by Molmil
Crystal Structure of Venezuelan Equine Encephalitis Alphavirus nsP2 Protease Domain
Descriptor: FORMIC ACID, helicase nsP2
Authors:Russo, A.T, White, M.A, Watowich, S.J.
Deposit date:2006-08-01
Release date:2006-09-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Crystal Structure of the Venezuelan Equine Encephalitis Alphavirus nsP2 Protease.
Structure, 14, 2006
2XVO
DownloadVisualize
BU of 2xvo by Molmil
SSO1725, a protein involved in the CRISPR/Cas pathway
Descriptor: BETA-MERCAPTOETHANOL, SSO1725, SULFATE ION
Authors:Reeks, J, Liu, H, Naismith, J, White, M, McMahon, S.
Deposit date:2010-10-26
Release date:2010-12-29
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure and Mechanism of the Cmr Complex for Crispr-Mediated Antiviral Immunity.
Mol.Cell, 45, 2012
2W04
DownloadVisualize
BU of 2w04 by Molmil
Co-complex Structure of Achromobactin Synthetase Protein D (AcsD) with citrate in ATP binding site from Pectobacterium Chrysanthemi
Descriptor: ACSD, CITRATE ANION
Authors:Schmelz, S, McMahon, S.A, Kadi, N, Song, L, Oves-Costales, D, Oke, M, Liu, H, Johnson, K.A, Carter, L, White, M.F, Challis, G.L, Naismith, J.H.
Deposit date:2008-08-08
Release date:2009-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Acsd Catalyzes Enantioselective Citrate Desymmetrization in Siderophore Biosynthesis
Nat.Chem.Biol., 5, 2009
2W03
DownloadVisualize
BU of 2w03 by Molmil
Co-complex Structure of Achromobactin Synthetase Protein D (AcsD) with adenosine, sulfate and citrate from Pectobacterium Chrysanthemi
Descriptor: ACSD, ADENOSINE, CITRIC ACID, ...
Authors:Schmelz, S, McMahon, S.A, Kadi, N, Song, L, Oves-Costales, D, Oke, M, Liu, H, Johnson, K.A, Carter, L, White, M.F, Challis, G.L, Naismith, J.H.
Deposit date:2008-08-08
Release date:2009-01-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Acsd Catalyzes Enantioselective Citrate Desymmetrization in Siderophore Biosynthesis
Nat.Chem.Biol., 5, 2009
2XU2
DownloadVisualize
BU of 2xu2 by Molmil
Crystal Structure of the hypothetical protein PA4511 from Pseudomonas aeruginosa
Descriptor: CITRIC ACID, UPF0271 PROTEIN PA4511
Authors:Oke, M, Carter, L.G, Johnson, K.A, Liu, H, McMahon, S.A, White, M.F, Naismith, J.H.
Deposit date:2010-10-14
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
2BKY
DownloadVisualize
BU of 2bky by Molmil
Crystal structure of the Alba1:Alba2 heterodimer from sulfolobus solfataricus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA/RNA-BINDING PROTEIN ALBA 1, DNA/RNA-BINDING PROTEIN ALBA 2
Authors:Jelinska, C, Conroy, M.J, Craven, C.J, Bullough, P.A, Waltho, J.P, Taylor, G.L, White, M.F.
Deposit date:2005-02-22
Release date:2005-07-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Obligate Heterodimerization of the Archaeal Alba2 Protein with Alba1 Provides a Mechanism for Control of DNA Packaging.
Structure, 13, 2005
2BGW
DownloadVisualize
BU of 2bgw by Molmil
XPF from Aeropyrum pernix, complex with DNA
Descriptor: 5'-D(*GP*AP*TP*CP*AP*CP*AP*GP*AP*TP *GP*CP*TP*GP*A)-3', 5'-D(*TP*CP*AP*GP*CP*AP*TP*CP*TP*GP *TP*GP*AP*TP*C)-3', MAGNESIUM ION, ...
Authors:Newman, M, Murray-Rust, J, Lally, J, Rudolf, J, Fadden, A, Knowles, P.P, White, M.F, McDonald, N.Q.
Deposit date:2005-01-06
Release date:2005-02-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of an XPF endonuclease with and without DNA suggests a model for substrate recognition.
EMBO J., 24, 2005
2GG1
DownloadVisualize
BU of 2gg1 by Molmil
NMR solution structure of domain III of the E-protein of tick-borne Langat flavivirus (includes RDC restraints)
Descriptor: Genome polyprotein
Authors:Mukherjee, M, Dutta, K, White, M.A, Cowburn, D, Fox, R.O.
Deposit date:2006-03-23
Release date:2006-04-25
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:NMR solution structure and backbone dynamics of domain III of the E protein of tick-borne Langat flavivirus suggests a potential site for molecular recognition.
Protein Sci., 15, 2006
2IX2
DownloadVisualize
BU of 2ix2 by Molmil
Crystal structure of the heterotrimeric PCNA from Sulfolobus solfataricus
Descriptor: DNA POLYMERASE SLIDING CLAMP A, DNA POLYMERASE SLIDING CLAMP B, DNA POLYMERASE SLIDING CLAMP C
Authors:Williams, G.J, Johnson, K, McMahon, S.A, Carter, L, Oke, M, Liu, H, Taylor, G.L, White, M.F, Naismith, J.H.
Deposit date:2006-07-05
Release date:2006-10-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the Heterotrimeric PCNA from Sulfolobus Solfataricus.
Acta Crystallogr.,Sect.F, 62, 2006
4DN8
DownloadVisualize
BU of 4dn8 by Molmil
Structure of porcine surfactant protein D neck and carbohydrate recognition domain complexed with mannose
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, beta-D-mannopyranose
Authors:van Eijk, M, Rynkiewicz, M.J, White, M.R, Hartshorn, K.L, Zou, X, Schulten, K, Luo, D, Crouch, E.C, Cafarella, T.M, Head, J.F, Haagsman, H.P, Seaton, B.A.
Deposit date:2012-02-08
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Unique Sugar-binding Site Mediates the Distinct Anti-influenza Activity of Pig Surfactant Protein D.
J.Biol.Chem., 287, 2012

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon