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PDB: 205 results

3NU5
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Crystal Structure of HIV-1 Protease Mutant I50V with Antiviral Drug Amprenavir
Descriptor: ACETATE ION, CHLORIDE ION, SODIUM ION, ...
Authors:Wang, Y.-F, Shen, C.H, Weber, I.T.
Deposit date:2010-07-06
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Amprenavir complexes with HIV-1 protease and its drug-resistant mutants altering hydrophobic clusters.
Febs J., 277, 2010
3NYF
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Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Histidine
Descriptor: (2Z)-3-(1H-imidazol-5-yl)-2-iminopropanoic acid, D-Arginine Dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Fu, G, Weber, I.T.
Deposit date:2010-07-15
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Conformational changes and substrate recognition in Pseudomonas aeruginosa D-arginine dehydrogenase.
Biochemistry, 49, 2010
2AOG
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Crystal structure analysis of HIV-1 protease mutant V82A with a substrate analog P2-NC
Descriptor: ACETIC ACID, GLYCEROL, HIV-1 PROTEASE (RETROPEPSIN), ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2AOD
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Crystal structure analysis of HIV-1 protease with a substrate analog P2-NC
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, HIV-1 PROTEASE, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2AOE
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crystal structure analysis of HIV-1 protease mutant V82A with a substrate analog CA-P2
Descriptor: ACETIC ACID, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2AOF
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Crystal structure analysis of HIV-1 Protease mutant V82A with a substrate analog P1-P6
Descriptor: ACETIC ACID, CHLORIDE ION, PEPTIDE INHIBITOR, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2AVV
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Kinetics, stability, and structural changes in high resolution crystal structures of HIV-1 protease with drug resistant mutations L24I, I50V, and G73S
Descriptor: ACETIC ACID, CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, ...
Authors:Liu, F, Boross, P.I, Wang, Y.F, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-30
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Kinetic, stability, and structural changes in high-resolution crystal structures of HIV-1 protease with drug-resistant mutations L24I, I50V, and G73S.
J.Mol.Biol., 354, 2005
2AOI
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Crystal structure analysis of HIV-1 protease with a substrate analog P1-P6
Descriptor: PEPTIDE INHIBITOR, POL POLYPROTEIN, SULFATE ION
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2AVM
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Kinetics, stability, and structural changes in high resolution crystal structures of HIV-1 protease with drug resistant mutations L24I, I50V, AND G73S
Descriptor: ACETIC ACID, GLYCEROL, HIV-1 protease, ...
Authors:Liu, F, Boross, P.I, Wang, Y.F, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-30
Release date:2006-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Kinetic, stability, and structural changes in high-resolution crystal structures of HIV-1 protease with drug-resistant mutations L24I, I50V, and G73S.
J.Mol.Biol., 354, 2005
2AVS
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kinetics, stability, and structural changes in high resolution crystal structures of HIV-1 protease with drug resistant mutations L24I, I50V, and G73S
Descriptor: ACETIC ACID, DIMETHYL SULFOXIDE, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, ...
Authors:Liu, F, Boross, P.I, Wang, Y.F, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-30
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Kinetic, stability, and structural changes in high-resolution crystal structures of HIV-1 protease with drug-resistant mutations L24I, I50V, and G73S.
J.Mol.Biol., 354, 2005
2OGT
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BU of 2ogt by Molmil
Crystal Structure of the Geobacillus Stearothermophilus Carboxylesterase EST55 at pH 6.8
Descriptor: GLYCEROL, IODIDE ION, Thermostable carboxylesterase Est50
Authors:Liu, P, Ewis, H.E, Tai, P.C, Lu, C.D, Weber, I.T.
Deposit date:2007-01-08
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal Structure of the Geobacillus stearothermophilus Carboxylesterase Est55 and Its Activation of Prodrug CPT-11.
J.Mol.Biol., 367, 2007
2OGS
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BU of 2ogs by Molmil
Crystal Structure of the GEOBACILLUS STEAROTHERMOPHILUS Carboxylesterase EST55 at pH 6.2
Descriptor: IODIDE ION, Thermostable carboxylesterase Est50
Authors:Liu, P, Ewis, H.E, Tai, P.C, Lu, C.D, Weber, I.T.
Deposit date:2007-01-08
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal Structure of the Geobacillus stearothermophilus Carboxylesterase Est55 and Its Activation of Prodrug CPT-11.
J.Mol.Biol., 367, 2007
4HDB
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BU of 4hdb by Molmil
Crystal Structure of HIV-1 protease mutants D30N complexed with inhibitor GRL-0519
Descriptor: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, HIV-1 Protease, ...
Authors:Zhang, H, Wang, Y.-F, Shen, C.H, Agniswamy, J, Weber, I.T.
Deposit date:2012-10-02
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Novel P2 tris-tetrahydrofuran group in antiviral compound 1 (GRL-0519) fills the S2 binding pocket of selected mutants of HIV-1 protease.
J.Med.Chem., 56, 2013
4HDF
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BU of 4hdf by Molmil
Crystal Structure of HIV-1 protease mutants V82A complexed with inhibitor GRL-0519
Descriptor: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, HIV-1 Protease
Authors:Zhang, H, Wang, Y.-F, Weber, I.T.
Deposit date:2012-10-02
Release date:2013-08-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Novel P2 tris-tetrahydrofuran group in antiviral compound 1 (GRL-0519) fills the S2 binding pocket of selected mutants of HIV-1 protease.
J.Med.Chem., 56, 2013
4J5J
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BU of 4j5j by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with Amprenavir
Descriptor: CHLORIDE ION, Protease, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Shen, C.H, Weber, I.T.
Deposit date:2013-02-08
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Extreme Multidrug Resistant HIV-1 Protease with 20 Mutations Is Resistant to Novel Protease Inhibitors with P1'-Pyrrolidinone or P2-Tris-tetrahydrofuran.
J.Med.Chem., 56, 2013
4J55
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BU of 4j55 by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical isolate PR20 with the potent antiviral inhibitor GRL-02031
Descriptor: (3aS,5R,6aR)-hexahydro-2H-cyclopenta[b]furan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-([(4-methoxyphenyl)sulfonyl]{[(2R)-5-oxopyrrolidin-2-yl]methyl}amino)propyl]carbamate, Protease
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2013-02-07
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Extreme Multidrug Resistant HIV-1 Protease with 20 Mutations Is Resistant to Novel Protease Inhibitors with P1'-Pyrrolidinone or P2-Tris-tetrahydrofuran.
J.Med.Chem., 56, 2013
4J54
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Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical isolate PR20 with the potent antiviral inhibitor GRL-0519A
Descriptor: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, ACETATE ION, IODIDE ION, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2013-02-07
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Extreme Multidrug Resistant HIV-1 Protease with 20 Mutations Is Resistant to Novel Protease Inhibitors with P1'-Pyrrolidinone or P2-Tris-tetrahydrofuran.
J.Med.Chem., 56, 2013
4JEC
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Joint neutron and X-ray structure of per-deuterated HIV-1 protease in complex with clinical inhibitor amprenavir
Descriptor: CHLORIDE ION, HIV-1 protease, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Kovalevsky, A.Y, Weber, I.T, Langan, P.
Deposit date:2013-02-26
Release date:2013-07-24
Last modified:2024-02-28
Method:NEUTRON DIFFRACTION (2.01 Å), X-RAY DIFFRACTION
Cite:Joint X-ray/Neutron Crystallographic Study of HIV-1 Protease with Clinical Inhibitor Amprenavir: Insights for Drug Design.
J.Med.Chem., 56, 2013
4KB9
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Crystal structure of wild-type HIV-1 protease with novel tricyclic P2-ligands GRL-0739A
Descriptor: (3aR,3bR,4S,7aR,8aS)-decahydrofuro[2,3-b][1]benzofuran-4-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2013-04-23
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Highly Potent HIV-1 Protease Inhibitors with Novel Tricyclic P2 Ligands: Design, Synthesis, and Protein-Ligand X-ray Studies.
J.Med.Chem., 56, 2013
4L12
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Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Gd
Descriptor: EGFP-based Calcium Sensor CatchER, GADOLINIUM ATOM
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-01
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
4L1I
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Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca
Descriptor: CALCIUM ION, EGFP-based Calcium Sensor CatchER
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-03
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
4L13
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BU of 4l13 by Molmil
Crystal structure of Ligand Free EGFP-based Calcium Sensor CatchER
Descriptor: ACETIC ACID, EGFP-based Calcium Sensor CatchER
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-01
Release date:2013-12-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
4MJW
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BU of 4mjw by Molmil
Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine
Descriptor: ACETATE ION, Choline oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Wang, Y.-F, Salvi, F, Gadda, G, Weber, I.T.
Deposit date:2013-09-04
Release date:2014-02-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of choline oxidase in complex with the reaction product glycine betaine.
Acta Crystallogr.,Sect.D, 70, 2014
6U7O
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HIV-1 wild type protease with GRL-00819A, with phenyl-boronic-acid as P2'-ligand and with a 6-5-5-ring fused crown-like tetrahydropyranofuran as the P2-ligand
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Wang, Y.-F, Kneller, D.W, Weber, I.T.
Deposit date:2019-09-03
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Potent HIV-1 Protease Inhibitors Containing Carboxylic and Boronic Acids: Effect on Enzyme Inhibition and Antiviral Activity and Protein-Ligand X-ray Structural Studies.
Chemmedchem, 14, 2019
6U7P
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HIV-1 wild type protease with GRL-03119A, with phenyl-boronic-acid as P2'-ligand and with a hexahydro-4H-furo-pyran as the P2-ligand
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Wang, Y.-F, Kneller, D.W, Weber, I.T.
Deposit date:2019-09-03
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Potent HIV-1 Protease Inhibitors Containing Carboxylic and Boronic Acids: Effect on Enzyme Inhibition and Antiviral Activity and Protein-Ligand X-ray Structural Studies.
Chemmedchem, 14, 2019

219869

數據於2024-05-15公開中

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