Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 659 results

2QW7
DownloadVisualize
BU of 2qw7 by Molmil
Carboxysome Subunit, CcmL
Descriptor: Carbon dioxide concentrating mechanism protein ccmL, GLYCEROL
Authors:Tanaka, S, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O.
Deposit date:2007-08-09
Release date:2008-03-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
1YJO
DownloadVisualize
BU of 1yjo by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate
Descriptor: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YJP
DownloadVisualize
BU of 1yjp by Molmil
Structure of GNNQQNY from yeast prion Sup35
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
4K2X
DownloadVisualize
BU of 4k2x by Molmil
OxyS anhydrotetracycline hydroxylase from Streptomyces rimosus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Polyketide oxygenase/hydroxylase
Authors:Wang, P, Sawaya, M.R, Tang, Y.
Deposit date:2013-04-09
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Uncovering the Enzymes that Catalyze the Final Steps in Oxytetracycline Biosynthesis.
J.Am.Chem.Soc., 135, 2013
2APQ
DownloadVisualize
BU of 2apq by Molmil
Crystal Structure of an Active Site Mutant of Bovine Pancreatic Ribonuclease A (H119A-RNase A) with a 10-Glutamine expansion in the C-terminal hinge-loop.
Descriptor: PHOSPHATE ION, Ribonuclease
Authors:Sambashivan, S, Liu, Y, Sawaya, M.R, Gingery, M, Eisenberg, D.
Deposit date:2005-08-16
Release date:2005-09-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Amyloid-like fibrils of ribonuclease A with three-dimensional domain-swapped and native-like structure.
Nature, 437, 2005
1ZUR
DownloadVisualize
BU of 1zur by Molmil
Crystal structure of spin labeled T4 Lysozyme (V131R1F)
Descriptor: CHLORIDE ION, Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-4-phenyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
Authors:Fleissner, M.R, Cascio, D, Sawaya, M.R, Hideg, K, Hubbell, W.L.
Deposit date:2005-05-31
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of spin labeled T4 Lysozyme (V131R1F)
To be Published
3Q9J
DownloadVisualize
BU of 3q9j by Molmil
AIIFL segment derived from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold
Descriptor: CHLORIDE ION, Cyclic pseudo-peptide AIIFL(ORN)(HAO)YK(ORN), GLYCEROL, ...
Authors:Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
Deposit date:2011-01-07
Release date:2011-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
3NFZ
DownloadVisualize
BU of 3nfz by Molmil
Crystal structure of murine aminoacylase 3 in complex with N-acetyl-L-tyrosine
Descriptor: Aspartoacylase-2, CHLORIDE ION, N-acetyl-L-tyrosine, ...
Authors:Hsieh, J.M, Tsirulnikov, K, Sawaya, M.R, Magilnick, N, Abuladze, N, Kurtz, I, Abramson, J, Pushkin, A.
Deposit date:2010-06-10
Release date:2010-10-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structures of aminoacylase 3 in complex with acetylated substrates.
Proc.Natl.Acad.Sci.USA, 107, 2010
3NVF
DownloadVisualize
BU of 3nvf by Molmil
IIHFGS segment 138-143 from human prion
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
3NVG
DownloadVisualize
BU of 3nvg by Molmil
MIHFGN segment 137-142 from mouse prion
Descriptor: Major prion protein
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
3Q9H
DownloadVisualize
BU of 3q9h by Molmil
LVFFA segment from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold
Descriptor: 1,4-BUTANEDIOL, Cyclic pseudo-peptide LVFFA(ORN)(HAO)LK(ORN), GLYCEROL, ...
Authors:Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
Deposit date:2011-01-07
Release date:2011-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
5UI2
DownloadVisualize
BU of 5ui2 by Molmil
CRYSTAL STRUCTURE OF ORANGE CAROTENOID PROTEIN
Descriptor: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, CHLORIDE ION, Orange carotenoid-binding protein, ...
Authors:KERFELD, C.A, SAWAYA, M.R, VISHNU, B, KROGMANN, D, YEATES, T.O.
Deposit date:2017-01-12
Release date:2017-01-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of a cyanobacterial water-soluble carotenoid binding protein.
Structure, 11, 2003
1ZWN
DownloadVisualize
BU of 1zwn by Molmil
Crystal structure of spin labeled T4 Lysozyme (V131R1B)
Descriptor: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
Authors:Fleissner, M.R, Cascio, D, Sawaya, M.R, Hideg, K, Hubbell, W.L.
Deposit date:2005-06-03
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of spin labeled T4 Lysozyme (V131R1B)
To be Published
3Q9I
DownloadVisualize
BU of 3q9i by Molmil
LVFFA segment from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold, bromide derivative
Descriptor: CHLORIDE ION, Cyclic pseudo-peptide LV(4BF)FA(ORN)(HAO)LK(ORN), GLYCEROL, ...
Authors:Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
Deposit date:2011-01-07
Release date:2011-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
4LCL
DownloadVisualize
BU of 4lcl by Molmil
Simvastatin Synthase (LOVD), from Aspergillus Terreus, LovD6 mutant (simh6208)
Descriptor: ISOPROPYL ALCOHOL, Transesterase
Authors:Gao, X, Sawaya, M.R, Yeates, T.O, Tang, Y.
Deposit date:2013-06-21
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of distant mutations and allosteric regulation on LovD active site dynamics.
Nat.Chem.Biol., 10, 2014
3NVH
DownloadVisualize
BU of 3nvh by Molmil
MIHFGND segment 137-143 from mouse prion
Descriptor: Major prion protein, trifluoroacetic acid
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
5UBO
DownloadVisualize
BU of 5ubo by Molmil
Mical-oxidized Actin complex with Gelsolin Segment 1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Grintsevich, E.E, Sawaya, M.R, Reisler, E.
Deposit date:2016-12-21
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Catastrophic disassembly of actin filaments via Mical-mediated oxidation.
Nat Commun, 8, 2017
2BPF
DownloadVisualize
BU of 2bpf by Molmil
STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*GP*GP*CP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*G)-3'), ...
Authors:Pelletier, H, Sawaya, M.R, Kumar, A, Wilson, S.H, Kraut, J.
Deposit date:1994-05-19
Release date:1994-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP.
Science, 264, 1994
3H8Y
DownloadVisualize
BU of 3h8y by Molmil
Crystal structure of carboxysome small shell protein CsoS1C from Halothiobacillus neapolitanus
Descriptor: Major carboxysome shell protein 1C
Authors:Tsai, Y, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-04-29
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Analysis of lattice-translocation disorder in the layered hexagonal structure of carboxysome shell protein CsoS1C
Acta Crystallogr.,Sect.D, 65, 2009
3NGK
DownloadVisualize
BU of 3ngk by Molmil
PduA from Salmonella enterica Typhimurium
Descriptor: Propanediol utilization protein pduA
Authors:Crowley, C.S, Cascio, D, Sawaya, M.R, Yeates, T.O.
Deposit date:2010-06-11
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2608 Å)
Cite:Structural Insight into the Mechanisms of Transport across the Salmonella enterica Pdu Microcompartment Shell.
J.Biol.Chem., 285, 2010
5V8C
DownloadVisualize
BU of 5v8c by Molmil
LytR-Csp2A-Psr enzyme from Actinomyces oris
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Amer, B.R, Sawaya, M.R, Liauw, B, Fu, J.Y, Ton-That, H, Clubb, R.T.
Deposit date:2017-03-21
Release date:2018-04-11
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure and Mechanism of LcpA, a Phosphotransferase That Mediates Glycosylation of a Gram-Positive Bacterial Cell Wall-Anchored Protein.
MBio, 10, 2019
2RCF
DownloadVisualize
BU of 2rcf by Molmil
Carboxysome Shell protein, OrfA from H. Neapolitanus
Descriptor: CHLORIDE ION, GLYCEROL, Unidentified carboxysome polypeptide
Authors:Kerfeld, C.A, Sawaya, M.R, Yeates, T.O.
Deposit date:2007-09-19
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
3SB7
DownloadVisualize
BU of 3sb7 by Molmil
Cu-mediated Trimer of T4 Lysozyme D61H/K65H/R76H/R80H by Synthetic Symmetrization
Descriptor: COPPER (II) ION, GLYCEROL, Lysozyme
Authors:Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
Deposit date:2011-06-03
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3CGI
DownloadVisualize
BU of 3cgi by Molmil
Crystal structure of the PduU shell protein from the Pdu microcompartment
Descriptor: Propanediol utilization protein pduU
Authors:Crowley, C.S, Sawaya, M.R, Yeates, T.O.
Deposit date:2008-03-05
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the PduU Shell Protein from the Pdu Microcompartment of Salmonella
Structure, 16, 2008
2BPG
DownloadVisualize
BU of 2bpg by Molmil
STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*GP*GP*CP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*G)-3'), ...
Authors:Pelletier, H, Sawaya, M.R, Kumar, A, Wilson, S.H, Kraut, J.
Deposit date:1994-05-19
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP.
Science, 264, 1994

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon