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PDB: 1423 results

7CS0
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Paromomycin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Aminoglycoside 2'-N-acetyltransferase, ...
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-14
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
6KYV
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Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs
Descriptor: Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION
Authors:Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.
Rna Biol., 17, 2020
2XXN
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Structure of the vIRF4-HAUSP TRAF domain complex
Descriptor: K10, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7
Authors:Choi, W.C, Hwang, J, Kim, M.H.
Deposit date:2010-11-11
Release date:2011-11-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Bilateral Inhibition of Hausp Deubiquitinase by a Viral Interferon Regulatory Factor Protein
Nat.Struct.Mol.Biol., 18, 2011
6L0Y
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Structure of dsRNA with G-U wobble base pairs
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3')
Authors:Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
Deposit date:2019-09-27
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of dsRNA with G-U wobble base pairs
To Be Published
6A8J
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Crystal structure of bacterial protein toxins
Descriptor: GLYCEROL, RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-09
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
6II6
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BU of 6ii6 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O in complex with a human ADP-ribosylation factor 3 (ARF3)
Descriptor: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
7DVN
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BU of 7dvn by Molmil
Crystal structure of a MarR family protein in complex with a lipid-like effector molecule from the psychrophilic bacterium Paenisporosarcina sp. TG-14
Descriptor: MarR family transcriptional regulator, PALMITIC ACID
Authors:Lee, C.W, Hwang, J, Do, H, Lee, J.H.
Deposit date:2021-01-14
Release date:2021-11-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a MarR family protein from the psychrophilic bacterium Paenisporosarcina sp. TG-14 in complex with a lipid-like molecule.
Iucrj, 8, 2021
8KA0
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BU of 8ka0 by Molmil
Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin and a nicotinamide adenine dinucleotide (NAD+)
Descriptor: CALCIUM ION, Calmodulin-2, GLYCEROL, ...
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin and a nicotinamide adenine dinucleotide (NAD+)
To Be Published
8K9Z
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin
Descriptor: CALCIUM ION, Calmodulin-2, RDTND-RID CBD
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin
To Be Published
8KA1
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin
Descriptor: Calmodulin-2, MAGNESIUM ION, RDTND-RID CBD
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin
To Be Published
6II2
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Crystal structure of alpha-beta hydrolase (ABH) and Makes Caterpillars Floppy (MCF)-Like effectors of Vibrio vulnificus MO6-24/O
Descriptor: Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyung, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IMP
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BU of 6imp by Molmil
Crystal structure of alpha-beta hydrolase (ABH) from Vibrio vulnificus
Descriptor: RTX toxin RtxA
Authors:Kim, M.H, Hwang, J.
Deposit date:2018-10-23
Release date:2019-08-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II0
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BU of 6ii0 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
Descriptor: GLYCEROL, Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
3KZ9
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BU of 3kz9 by Molmil
Crystal structure of the master transcriptional regulator, SmcR, in Vibrio vulnificus provides insight into its DNA recognition mechanism
Descriptor: SULFATE ION, SmcR
Authors:Kim, M.H, Kim, Y, Choi, W.-C, Hwang, J.
Deposit date:2009-12-08
Release date:2010-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription
J.Biol.Chem., 285, 2010
8KA2
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BU of 8ka2 by Molmil
Crystal structure of the RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) from Vibrio vulnificus
Descriptor: RDTND-RID CBD
Authors:Lee, Y, Choi, S, Hwang, J, Kim, M.H.
Deposit date:2023-08-02
Release date:2024-07-10
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Crystal structure of the RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) from Vibrio vulnificus
To Be Published
3I1A
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BU of 3i1a by Molmil
Crystal Structure of apo Spectinomycin Phosphotransferase, APH(9)-Ia
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, Spectinomycin phosphotransferase, ...
Authors:Berghuis, A.M, Fong, D.H, Lemke, C.T, Hwang, J, Xiong, B.
Deposit date:2009-06-25
Release date:2010-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
5X3R
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BU of 5x3r by Molmil
Crystal structure of the SmcR complexed with QStatin
Descriptor: 1-(5-bromanylthiophen-2-yl)sulfonylpyrazole, LuxR family transcriptional regulator, SULFATE ION
Authors:Jang, S.Y, Hwang, J, Kim, M.H.
Deposit date:2017-02-07
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:QStatin, a Selective Inhibitor of Quorum Sensing inVibrioSpecies
MBio, 9, 2018
6A7H
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Bacterial protein toxins
Descriptor: RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-03
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
3I0Q
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BU of 3i0q by Molmil
Crystal Structure of the AMP-bound complex of Spectinomycin Phosphotransferase, APH(9)-Ia
Descriptor: ADENOSINE MONOPHOSPHATE, NICKEL (II) ION, Spectinomycin phosphotransferase
Authors:Berghuis, A.M, Fong, D.H, Lemke, C.T, Hwang, J.-Y, Xiong, B.
Deposit date:2009-06-25
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
7EKZ
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BU of 7ekz by Molmil
Structural and functional insights into Hydra Actinoporin-Like Toxin 1 (HALT-1)
Descriptor: FORMIC ACID, GLYCEROL, HALT-1
Authors:Ker, D.S, Sha, X.H, Jonet, M.A, Hwang, J.S, Ng, C.L.
Deposit date:2021-04-07
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural and functional analysis of Hydra Actinoporin-Like Toxin 1 (HALT-1).
Sci Rep, 11, 2021
3I0O
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Crystal Structure of Spectinomycin Phosphotransferase, APH(9)-Ia, in complex with ADP and Spectinomcyin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Fong, D.H, Lemke, C.T, Hwang, J, Xiong, B, Berghuis, A.M.
Deposit date:2009-06-25
Release date:2010-01-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
3Q2M
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Crystal Structure of Spectinomycin Phosphotransferase, APH(9)-Ia, Protein Kinase Inhibitor CKI-7 Complex
Descriptor: N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE, NICKEL (II) ION, Spectinomycin phosphotransferase
Authors:Berghuis, A.M, Fong, D.H, Xiong, B, Hwang, J.
Deposit date:2010-12-20
Release date:2011-05-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of two aminoglycoside kinases bound with a eukaryotic protein kinase inhibitor.
Plos One, 6, 2011
3Q2J
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Crystal Structure of 3',5"-Aminoglycoside Phosphotransferase Type IIIa Protein Kinase Inhibitor CKI-7 Complex
Descriptor: Aminoglycoside 3'-phosphotransferase, CALCIUM ION, N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE
Authors:Fong, D.H, Xiong, B, Hwang, J, Berghuis, A.M.
Deposit date:2010-12-20
Release date:2011-05-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1501 Å)
Cite:Crystal structures of two aminoglycoside kinases bound with a eukaryotic protein kinase inhibitor.
Plos One, 6, 2011

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