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PDB: 1452 件

6A8J
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Crystal structure of bacterial protein toxins
分子名称: GLYCEROL, RTX toxin, SULFATE ION
著者Kim, M.H, Hwang, J, Jang, S.Y.
登録日2018-07-09
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.711 Å)
主引用文献Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
2XXN
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Structure of the vIRF4-HAUSP TRAF domain complex
分子名称: K10, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7
著者Choi, W.C, Hwang, J, Kim, M.H.
登録日2010-11-11
公開日2011-11-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Bilateral Inhibition of Hausp Deubiquitinase by a Viral Interferon Regulatory Factor Protein
Nat.Struct.Mol.Biol., 18, 2011
6IMP
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Crystal structure of alpha-beta hydrolase (ABH) from Vibrio vulnificus
分子名称: RTX toxin RtxA
著者Kim, M.H, Hwang, J.
登録日2018-10-23
公開日2019-08-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II0
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Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
分子名称: GLYCEROL, Putative RTX-toxin
著者Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
登録日2018-10-03
公開日2019-08-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II2
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Crystal structure of alpha-beta hydrolase (ABH) and Makes Caterpillars Floppy (MCF)-Like effectors of Vibrio vulnificus MO6-24/O
分子名称: Putative RTX-toxin
著者Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyung, J, Lee, C, Eom, S.H, Kim, M.H.
登録日2018-10-03
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II6
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Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O in complex with a human ADP-ribosylation factor 3 (ARF3)
分子名称: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
登録日2018-10-03
公開日2019-08-07
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
8KA2
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Crystal structure of the RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) from Vibrio vulnificus
分子名称: RDTND-RID CBD
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8K9Z
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin
分子名称: CALCIUM ION, Calmodulin-2, RDTND-RID CBD
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8KA1
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin
分子名称: Calmodulin-2, MAGNESIUM ION, RDTND-RID CBD
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8KA0
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin and a nicotinamide adenine dinucleotide (NAD+)
分子名称: CALCIUM ION, Calmodulin-2, GLYCEROL, ...
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
5X3R
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Crystal structure of the SmcR complexed with QStatin
分子名称: 1-(5-bromanylthiophen-2-yl)sulfonylpyrazole, LuxR family transcriptional regulator, SULFATE ION
著者Jang, S.Y, Hwang, J, Kim, M.H.
登録日2017-02-07
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献QStatin, a Selective Inhibitor of Quorum Sensing inVibrioSpecies
MBio, 9, 2018
6L0Y
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Structure of dsRNA with G-U wobble base pairs
分子名称: RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3')
著者Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
登録日2019-09-27
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of dsRNA with G-U wobble base pairs
To Be Published
6J10
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Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
分子名称: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
著者Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
登録日2018-12-27
公開日2019-04-17
最終更新日2019-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
3I0Q
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Crystal Structure of the AMP-bound complex of Spectinomycin Phosphotransferase, APH(9)-Ia
分子名称: ADENOSINE MONOPHOSPHATE, NICKEL (II) ION, Spectinomycin phosphotransferase
著者Berghuis, A.M, Fong, D.H, Lemke, C.T, Hwang, J.-Y, Xiong, B.
登録日2009-06-25
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
7DVN
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Crystal structure of a MarR family protein in complex with a lipid-like effector molecule from the psychrophilic bacterium Paenisporosarcina sp. TG-14
分子名称: MarR family transcriptional regulator, PALMITIC ACID
著者Lee, C.W, Hwang, J, Do, H, Lee, J.H.
登録日2021-01-14
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a MarR family protein from the psychrophilic bacterium Paenisporosarcina sp. TG-14 in complex with a lipid-like molecule.
Iucrj, 8, 2021
3I0O
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Crystal Structure of Spectinomycin Phosphotransferase, APH(9)-Ia, in complex with ADP and Spectinomcyin
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NICKEL (II) ION, ...
著者Fong, D.H, Lemke, C.T, Hwang, J, Xiong, B, Berghuis, A.M.
登録日2009-06-25
公開日2010-01-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
6KYV
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Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs
分子名称: Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION
著者Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
登録日2019-09-20
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.
Rna Biol., 17, 2020
1MKY
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Structural Analysis of the Domain Interactions in Der, a Switch Protein Containing Two GTPase Domains
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Probable GTP-binding protein engA
著者Robinson, V.L, Hwang, J, Fox, E, Inouye, M, Stock, A.M.
登録日2002-08-29
公開日2003-01-14
最終更新日2015-02-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Domain Arrangement of Der, a Switch Protein Containing Two GTPase Domains
Structure, 10, 2002
3KZ9
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Crystal structure of the master transcriptional regulator, SmcR, in Vibrio vulnificus provides insight into its DNA recognition mechanism
分子名称: SULFATE ION, SmcR
著者Kim, M.H, Kim, Y, Choi, W.-C, Hwang, J.
登録日2009-12-08
公開日2010-03-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription
J.Biol.Chem., 285, 2010
3I1A
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Crystal Structure of apo Spectinomycin Phosphotransferase, APH(9)-Ia
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, Spectinomycin phosphotransferase, ...
著者Berghuis, A.M, Fong, D.H, Lemke, C.T, Hwang, J, Xiong, B.
登録日2009-06-25
公開日2010-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
7CRM
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-APO Structure
分子名称: 1,2-ETHANEDIOL, Aminoglycoside 2'-N-acetyltransferase
著者Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
登録日2020-08-13
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.487 Å)
主引用文献Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CS1
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Neomycin
分子名称: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, NEOMYCIN
著者Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
登録日2020-08-14
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.966 Å)
主引用文献Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CSI
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Sisomicin
分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aminoglycoside 2'-N-acetyltransferase, COENZYME A
著者Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
登録日2020-08-14
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CS0
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Paromomycin
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aminoglycoside 2'-N-acetyltransferase, ...
著者Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
登録日2020-08-14
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CSJ
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Gentamicin
分子名称: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, gentamicin C1
著者Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
登録日2020-08-14
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.168 Å)
主引用文献Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020

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