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PDB: 1589 results

5X6E
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Crystal structure of PrfA-DNA binary complex
Descriptor: DNA (28-MER), DNA (29-MER), GLUTATHIONE, ...
Authors:Wang, Y, Feng, H, Zhu, Y.L, Gao, P.
Deposit date:2017-02-21
Release date:2017-04-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structural insights into glutathione-mediated activation of the master regulator PrfA in Listeria monocytogenes
Protein Cell, 8, 2017
5XG8
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Galectin-13/Placental Protein 13 variant R53H crystal structure
Descriptor: GLYCEROL, Galactoside-binding soluble lectin 13
Authors:Wang, Y, Su, J.Y.
Deposit date:2017-04-12
Release date:2018-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Galectin-13, a different prototype galectin, does not bind beta-galacto-sides and forms dimers via intermolecular disulfide bridges between Cys-136 and Cys-138
Sci Rep, 8, 2018
4WF7
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BU of 4wf7 by Molmil
Crystal structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in the intramolecular isomerization catalysis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wang, Y.L, Chow, S.Y, Lin, Y.T, Hsieh, Y.C, Lee, G.C, Liaw, S.H.
Deposit date:2014-09-13
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in catalysis of the intramolecular isomerization.
Acta Crystallogr.,Sect.D, 70, 2014
4WX5
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pore-forming thermostable direct hemolysin from Grimontia hollisae
Descriptor: Hemolysin, heat labile
Authors:Wang, Y.-K, Wu, T.-K, Li, T.-H.T.
Deposit date:2014-11-13
Release date:2015-11-18
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Multiple pleomorphic tetramers of pore-forming thermostable direct hemolysin from Grimontia hollisae in exerting membrane binding and hemolytic activity
To be published
4X3O
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BU of 4x3o by Molmil
Sirt2 in complex with a myristoyl peptide
Descriptor: 1,2-ETHANEDIOL, NAD-dependent protein deacetylase sirtuin-2, ZINC ION, ...
Authors:Wang, Y, Zhang, W.Z, Hao, Q.
Deposit date:2014-12-01
Release date:2016-01-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deacylation Mechanism by SIRT2 Revealed in the 1'-SH-2'-O-Myristoyl Intermediate Structure.
Cell Chem Biol, 24, 2017
4WX3
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pore-forming thermostable direct hemolysin from Grimontia hollisae
Descriptor: Hemolysin, heat labile
Authors:Wang, Y.-K, Wu, T.-K, Li, T.-H.T.
Deposit date:2014-11-13
Release date:2015-11-18
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Multiple pleomorphic tetramers of pore-forming thermostable direct hemolysin from Grimontia hollisae in exerting membrane binding and hemolytic activity
To be published
4X3P
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Sirt2 in complex with a myristoyl peptide
Descriptor: 1,2-ETHANEDIOL, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Wang, Y, Zhang, W, Hao, Q.
Deposit date:2014-12-01
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deacylation Mechanism by SIRT2 Revealed in the 1'-SH-2'-O-Myristoyl Intermediate Structure.
Cell Chem Biol, 24, 2017
1CW5
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BU of 1cw5 by Molmil
SOLUTION STRUCTURE OF CARNOBACTERIOCIN B2
Descriptor: TYPE IIA BACTERIOCIN CARNOBACTERIOCIN B2
Authors:Wang, Y, Henz, M.E, Gallagher, N.L.F, Chai, S, Yan, L.Z, Gibbs, A.C, Stiles, M.E, Wishart, D.S, Vederas, J.C.
Deposit date:1999-08-25
Release date:1999-09-07
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of carnobacteriocin B2 and implications for structure-activity relationships among type IIa bacteriocins from lactic acid bacteria.
Biochemistry, 38, 1999
1CW6
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BU of 1cw6 by Molmil
REFINED SOLUTION STRUCTURE OF LEUCOCIN A
Descriptor: TYPE IIA BACTERIOCIN LEUCOCIN A
Authors:Wang, Y, Henz, M.E, Gallagher, N.L.F, Chai, S, Yan, L.Z, Gibbs, A.C, Stiles, M.E, Wishart, D.S, Vederas, J.C.
Deposit date:1999-08-25
Release date:1999-09-08
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of carnobacteriocin B2 and implications for structure-activity relationships among type IIa bacteriocins from lactic acid bacteria.
Biochemistry, 38, 1999
5XIW
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BU of 5xiw by Molmil
Crystal structure of T2R-TTL-Colchicine complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Wang, Y, Yang, J, Wang, T, Chen, L.
Deposit date:2017-04-27
Release date:2018-04-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The compound millepachine and its derivatives inhibit tubulin polymerization by irreversibly binding to the colchicine-binding site in beta-tubulin.
J. Biol. Chem., 2018
1DE1
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BU of 1de1 by Molmil
NMR STRUCTURES OF OXIDIZED BACTERIOPHAGE T4 GLUTAREDOXIN
Descriptor: GLUTAREDOXIN
Authors:Wang, Y, Amegbey, G, Wishart, D.S.
Deposit date:1999-11-12
Release date:1999-11-24
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structures of reduced and oxidized bacteriophage T4 glutaredoxin.
J.Biomol.Nmr, 29, 2004
1DE2
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BU of 1de2 by Molmil
NMR STRUCTURES OF REDUCED BACTERIOPHAGE T4 GLUTAREDOXIN
Descriptor: GLUTAREDOXIN
Authors:Wang, Y, Wishart, D.S.
Deposit date:1999-11-12
Release date:1999-11-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of reduced and oxidized bacteriophage T4 glutaredoxin.
J.Biomol.Nmr, 29, 2004
6L7N
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BU of 6l7n by Molmil
crystal structure of a FUNGAL LIPASES
Descriptor: Lipase, class 3
Authors:Wang, Y.H, Yuan, H, Lan, D.M, Liu, X.H.
Deposit date:2019-11-01
Release date:2020-11-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:crystal structure of a FUNGAL LIPASES
To Be Published
6KZD
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BU of 6kzd by Molmil
Crystal structure of TRKc in complex with 3-((6-(4-aminophenyl)imidazo[1,2-a]pyrazin-3-yl)ethynyl)- N-(3-isopropyl-5-((4-methylpiperazin-1-yl)methyl)phenyl)-2- methylbenzamide
Descriptor: 3-[2-[6-(4-aminophenyl)imidazo[1,2-a]pyrazin-3-yl]ethynyl]-2-methyl-~{N}-[3-(4-methylpiperazin-1-yl)-5-propan-2-yl-phenyl]benzamide, NT-3 growth factor receptor, PHOSPHATE ION
Authors:Wang, Y, Zhang, Z.M.
Deposit date:2019-09-23
Release date:2019-10-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Design, synthesis and biological evaluation of 3-(imidazo[1,2-a]pyrazin-3-ylethynyl)-2-methylbenzamides as potent and selective pan-tropomyosin receptor kinase (TRK) inhibitors.
Eur.J.Med.Chem., 179, 2019
5JFP
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BU of 5jfp by Molmil
HIV-1 wild Type protease with GRL-097-13A (a Adamantane P1-Ligand with bis-THF in P2 and isobutylamine in P1')
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
5JFU
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BU of 5jfu by Molmil
HIV-1 wild Type protease with GRL-007-14A (a Adamantane P1-Ligand with bis-THF in P2 and benzylamine in P1')
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-4-{benzyl[(4-methoxyphenyl)sulfonyl]amino}-3-hydroxy-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, Protease
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
5KQE
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BU of 5kqe by Molmil
Solution structure of P2a-J2a/b-P2b of medaka telomerase RNA
Descriptor: Telomerase RNA P2ab
Authors:Wang, Y, Feigon, J.
Deposit date:2016-07-06
Release date:2016-08-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural conservation in the template/pseudoknot domain of vertebrate telomerase RNA from teleost fish to human.
Proc.Natl.Acad.Sci.USA, 113, 2016
6O5A
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BU of 6o5a by Molmil
Crystal Structure of multi-drug resistant HIV-1 protease PR-S17 with a substrate analog p2-NC in P61
Descriptor: GLYCEROL, HIV-1 protease, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2019-03-01
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Highly Drug-Resistant HIV-1 Protease Mutant PRS17 Shows Enhanced Binding to Substrate Analogues.
Acs Omega, 4, 2019
5JQG
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BU of 5jqg by Molmil
An apo tubulin-RB-TTL complex structure used for side-by-side comparison
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Wang, Y.X, Naismith, J.H, Zhu, X.
Deposit date:2016-05-04
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Pironetin reacts covalently with cysteine-316 of alpha-tubulin to destabilize microtubule
Nat Commun, 7, 2016
8AOU
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BU of 8aou by Molmil
Solution NMR structure of full-length Nsp1 from SARS-CoV-2.
Descriptor: Host translation inhibitor nsp1
Authors:Wang, Y, Kirkpatrick, J.P, Carlomagno, T.
Deposit date:2022-08-08
Release date:2022-12-28
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural insights into the activity regulation of full-length non-structural protein 1 from SARS-CoV-2.
Structure, 31, 2023
6O57
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Crystal Structure of multi-drug resistant HIV-1 protease PR-S17 with a substrate analog p2-NC in P41
Descriptor: FORMIC ACID, HIV-1 protease, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2019-03-01
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Highly Drug-Resistant HIV-1 Protease Mutant PRS17 Shows Enhanced Binding to Substrate Analogues.
Acs Omega, 4, 2019
6OTG
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HIV-1 protease triple mutants V32I, I47V, V82I with GRL-011-11A (a methylamine bis-Tetrahydrofuran P2-Ligand, sulfonamide isostere derivate)
Descriptor: (3R,3aS,4R,6aR)-4-(methylamino)hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, FORMIC ACID, GLYCEROL, ...
Authors:Wang, Y.-F, Pawar, S, Weber, I.T.
Deposit date:2019-05-03
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural studies of antiviral inhibitor with HIV-1 protease bearing drug resistant substitutions of V32I, I47V and V82I.
Biochem.Biophys.Res.Commun., 514, 2019
8GQE
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Crystal structure of the W285A mutant of UVR8 in complex with RUP2
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ultraviolet-B receptor UVR8, WD repeat-containing protein RUP2
Authors:Wang, Y.D, Wang, L.X, Guan, Z.Y, chang, H.F, Yin, P.
Deposit date:2022-08-30
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:RUP2 facilitates UVR8 redimerization via two interfaces.
Plant Commun., 4, 2023
6O48
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Wild-type HIV-1 protease in complex with a substrate analog CA-p2
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Wang, Y.-F, Liu, F, Weber, I.T.
Deposit date:2019-02-28
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Highly Drug-Resistant HIV-1 Protease Mutant PRS17 Shows Enhanced Binding to Substrate Analogues.
Acs Omega, 4, 2019
6K7Z
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BU of 6k7z by Molmil
Crystal structure of a GH18 chitinase from Pseudoalteromonas aurantia
Descriptor: GH18 chiitnase
Authors:Wang, Y.J, Li, P.Y, Cao, H.Y, Chen, X.L, Zhang, Y.Z.
Deposit date:2019-06-10
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structural Insight Into Chitin Degradation and Thermostability of a Novel Endochitinase From the Glycoside Hydrolase Family 18.
Front Microbiol, 10, 2019

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数据于2024-11-06公开中

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