Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 946 件

8HRN
DownloadVisualize
BU of 8hrn by Molmil
Cryo-EM structure of ACE2
分子名称: Angiotensin-converting enzyme 2
著者Xu, J, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
8HRL
DownloadVisualize
BU of 8hrl by Molmil
SARS-CoV-2 Delta S-RBD-ACE2
分子名称: Processed angiotensin-converting enzyme 2, Spike protein S1
著者Xu, J, Meng, F, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4LH6
DownloadVisualize
BU of 4lh6 by Molmil
Crystal structure of a LigA inhibitor
分子名称: 4-amino-2-bromothieno[3,2-c]pyridine-7-carboxamide, ACETATE ION, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, ...
著者Benenato, K, Wang, H, Mcguire, H.M, Davis, H, Gao, N, Prince, D.B, Jahic, H, Stokes, S.S, Boriack-Sjodin, P.A.
登録日2013-06-30
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification through structure-based methods of a bacterial NAD(+)-dependent DNA ligase inhibitor that avoids known resistance mutations.
Bioorg.Med.Chem.Lett., 24, 2014
3B57
DownloadVisualize
BU of 3b57 by Molmil
Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua. Northeast Structural Consortium target LkR65
分子名称: Lin1889 protein, MAGNESIUM ION
著者Kuzin, A.P, Abashidze, M, Seetharaman, J, Benach, J, Forouhar, F, Vorobiev, S.M, Wang, H, Janjua, H, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2007-10-25
公開日2007-11-06
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua.
To be Published
4E0A
DownloadVisualize
BU of 4e0a by Molmil
Crystal Structure of the mutant F44R BH1408 protein from Bacillus halodurans, Northeast Structural Genomics Consortium (NESG) Target BhR182
分子名称: ACETIC ACID, BH1408 protein, GLYCEROL, ...
著者Kuzin, A, Neely, H, Seetharaman, J, Patel, P, Xiao, R, Ciccosanti, C, Wang, H, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2012-03-02
公開日2012-05-02
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Northeast Structural Genomics Consortium Target BhR182
To be Published
8HXX
DownloadVisualize
BU of 8hxx by Molmil
Cryo-EM structure of the histone deacetylase complex Rpd3S
分子名称: Chromatin modification-related protein EAF3, Histone H3, Histone deacetylase RPD3, ...
著者Cui, H, Wang, H.
登録日2023-01-05
公開日2023-09-27
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
3E1E
DownloadVisualize
BU of 3e1e by Molmil
Crystal structure of a Thioesterase family protein from Silicibacter pomeroyi. NorthEast Structural Genomics target SiR180A
分子名称: Thioesterase family protein
著者Seetharaman, J, Abashidze, M, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-08-04
公開日2008-09-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a Thioesterase family protein from Silicibacter pomeroyi. NorthEast Structural Genomics target SiR180A
To be Published
2K8U
DownloadVisualize
BU of 2k8u by Molmil
Solution NMR structure of trans-4-hydroxynonenal derived dG adduct of (6S,8R,11S)-configuration matched with dC
分子名称: (2S,5R)-5-pentyltetrahydrofuran-2-ol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DCP*DGP*DCP*DTP*DAP*DGP*DC)-3'
著者Huang, H, Wang, H, Qi, N, Lloyd, R.S, Rizzo, C.J, Stone, M.P.
登録日2008-09-23
公開日2008-11-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.
Biochemistry, 47, 2008
4ICZ
DownloadVisualize
BU of 4icz by Molmil
HER2 1221/1222 phosphorylation regulated by PTPN9
分子名称: HER2, Tyrosine-protein phosphatase non-receptor type 9
著者Xu, Y.F, Wang, H.M, Liu, C.H, Yu, X, Sun, J.P.
登録日2012-12-11
公開日2013-12-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献HER2 1221/1222 phosphorylation regulated by PTPN9
To be Published
2YY0
DownloadVisualize
BU of 2yy0 by Molmil
Crystal Structure of MS0802, c-Myc-1 binding protein domain from Homo sapiens
分子名称: C-Myc-binding protein
著者Xie, Y, Wang, H, Ihsanawati, K.T, Kishishita, S, Takemoto, C, Shirozu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-27
公開日2008-04-29
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献crystal structure of c-Myc-1 binding protein domain from Homo sapiens
To be Published
4KUD
DownloadVisualize
BU of 4kud by Molmil
Crystal structure of N-terminal acetylated Sir3 BAH domain D205N mutant in complex with yeast nucleosome core particle
分子名称: Histone H2A.2, Histone H2B.1, Histone H3, ...
著者Yang, D, Fang, Q, Wang, M, Ren, R, Wang, H, He, M, Sun, Y, Yang, N, Xu, R.M.
登録日2013-05-22
公開日2013-08-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.203 Å)
主引用文献N alpha-acetylated Sir3 stabilizes the conformation of a nucleosome-binding loop in the BAH domain.
Nat.Struct.Mol.Biol., 20, 2013
2WOE
DownloadVisualize
BU of 2woe by Molmil
Crystal Structure of the D97N variant of dinitrogenase reductase- activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP-ribose
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
4H58
DownloadVisualize
BU of 4h58 by Molmil
BRAF in complex with compound 3
分子名称: CHLORIDE ION, N-(4-{[(2-methoxyethyl)amino]methyl}phenyl)-6-(pyridin-4-yl)quinazolin-2-amine, Serine/threonine-protein kinase B-raf
著者Vasbinder, M, Aquila, B, Augustin, M, Chueng, T, Cook, D, Drew, L, Fauber, B, Glossop, S, Godin, R, Grondine, M, Hennessy, E, Johannes, J, Lee, S, Lyne, P, Moertl, M, Omer, C, Palakurthi, S, Pontz, T, Read, J, Sha, L, Shen, M, Steinbacher, S, Wang, H, Wu, A, Ye, M, Bagal, B.
登録日2012-09-18
公開日2013-02-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Discovery and Optimization of a Novel Series of Potent Mutant B-Raf(V600E) Selective Kinase Inhibitors.
J.Med.Chem., 56, 2013
5ZAM
DownloadVisualize
BU of 5zam by Molmil
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
分子名称: Endoribonuclease Dicer, RISC-loading complex subunit TARBP2, RNA (73-mer)
著者Liu, Z, Wang, J, Cheng, H, Ke, X, Sun, L, Zhang, Q.C, Wang, H.-W.
登録日2018-02-07
公開日2018-05-09
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell, 173, 2018
2WOD
DownloadVisualize
BU of 2wod by Molmil
Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum in complex with ADP- ribsoyllysine
分子名称: ADP-RIBOSYL-[DINITROGEN REDUCTASE] GLYCOHYDROLASE, CHLORIDE ION, GLYCEROL, ...
著者Berthold, C.L, Wang, H, Nordlund, S, Hogbom, M.
登録日2009-07-23
公開日2009-08-11
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanism of Adp-Ribosylation Removal Revealed by the Structure and Ligand Complexes of the Dimanganese Mono-Adp-Ribosylhydrolase Drag.
Proc.Natl.Acad.Sci.USA, 106, 2009
2KAS
DownloadVisualize
BU of 2kas by Molmil
HNE-dG adduct mismatched with dA in basic solution
分子名称: (4S)-nonane-1,4-diol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DAP*DGP*DCP*DTP*DAP*DGP*DC)-3'
著者Huang, H, Wang, H, Lloyd, R.S, Rizzo, C.J, Stone, M.P.
登録日2008-11-13
公開日2009-05-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA
Chem.Res.Toxicol., 22, 2009
5F7H
DownloadVisualize
BU of 5f7h by Molmil
Human T-cell immunoglobulin and mucin domain protein 4 (hTIM-4) complex with phosphoserine
分子名称: CALCIUM ION, PHOSPHOSERINE, T-cell immunoglobulin and mucin domain-containing protein 4
著者Gao, G.F, Lu, G, Wang, H, Qi, J.
登録日2015-12-08
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of human TIM members: Ebolavirus entry-enhancing receptors
Chin.Sci.Bull., 60, 2015
1YD1
DownloadVisualize
BU of 1yd1 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima bound to its catalytic divalent cation: magnesium
分子名称: GLYCEROL, MAGNESIUM ION, UvrABC system protein C
著者Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
登録日2004-12-23
公開日2005-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
1YD5
DownloadVisualize
BU of 1yd5 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant N88A bound to its catalytic divalent cation
分子名称: MANGANESE (II) ION, UvrABC system protein C
著者Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
登録日2004-12-23
公開日2005-03-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
1YD4
DownloadVisualize
BU of 1yd4 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y29F bound to its catalytic divalent cation
分子名称: MANGANESE (II) ION, UvrABC system protein C
著者Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
登録日2004-12-23
公開日2005-03-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
2K8T
DownloadVisualize
BU of 2k8t by Molmil
Solution NMR structure of trans-4-hydroxynonenal derived dG adduct of (6R,8S,11R)-configuration opposite dC
分子名称: (2S,5R)-5-pentyltetrahydrofuran-2-ol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DCP*DGP*DCP*DTP*DAP*DGP*DC)-3'
著者Huang, H, Wang, H, Qi, N, Lloyd, R.S, Rizzo, C.J, Stone, M.P.
登録日2008-09-23
公開日2008-11-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The stereochemistry of trans-4-hydroxynonenal-derived exocyclic 1,N2-2'-deoxyguanosine adducts modulates formation of interstrand cross-links in the 5'-CpG-3' sequence.
Biochemistry, 47, 2008
2KAR
DownloadVisualize
BU of 2kar by Molmil
HNE-dG adduct mismatched with dA in acidic solution
分子名称: (4S)-nonane-1,4-diol, 5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DCP*DTP*DAP*DGP*DCP*DTP*DAP*DGP*DC)-3'
著者Huang, H, Wang, H, Lloyd, R.S, Rizzo, C.J, Stone, M.P.
登録日2008-11-13
公開日2009-05-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Conformational interconversion of the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N(2)-deoxyguanosine adduct when mismatched with deoxyadenosine in DNA
Chem.Res.Toxicol., 22, 2009
3GGN
DownloadVisualize
BU of 3ggn by Molmil
Crystal structure of DR_A0006 from Deinococcus radiodurans. Northeast Structural Genomics Consortium Target DrR147D
分子名称: Uncharacterized protein DR_A0006
著者Seetharaman, J, Neely, H, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2009-02-28
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of DR_A0006 from Deinococcus radiodurans.
To be Published
1YD0
DownloadVisualize
BU of 1yd0 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima bound to its catalytic divalent cation: manganese
分子名称: GLYCEROL, MANGANESE (II) ION, UvrABC system protein C
著者Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
登録日2004-12-23
公開日2005-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
3GAD
DownloadVisualize
BU of 3gad by Molmil
Structure of apomif
分子名称: ACETIC ACID, Macrophage migration inhibitory factor-like protein, SULFATE ION
著者Zhou, Y.-F, Su, X.-D, Shao, D, Wang, H.
登録日2009-02-17
公開日2009-12-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host
Mol.Immunol., 47, 2010

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon