3GAD

Structure of apomif

Summary for 3GAD

Related3GAC
DescriptorMacrophage migration inhibitory factor-like protein, SULFATE ION, ACETIC ACID, ... (4 entities in total)
Functional Keywordsmacrophage migration inhibitory factor, cytokine
Biological sourcePlasmodium yoelii yoelii
Total number of polymer chains6
Total molecular weight78568.17
Authors
Zhou, Y.-F.,Su, X.-D.,Shao, D.,Wang, H. (deposition date: 2009-02-17, release date: 2009-12-29, Last modification date: 2011-07-13)
Primary citation
Shao, D.,Zhong, X.,Zhou, Y.-F.,Han, Z.,Lin, Y.,Wang, Z.,Bu, L.,Zhang, L.,Su, X.-D.,Wang, H.
Structural and functional comparison of MIF ortholog from Plasmodium yoelii with MIF from its rodent host
Mol.Immunol., 47:726-737, 2010
PubMed: 20004020 (PDB entries with the same primary citation)
DOI: 10.1016/j.molimm.2009.10.037
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.8 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.210201.8%2.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3gad
no rotation
Molmil generated image of 3gad
rotated about x axis by 90°
Molmil generated image of 3gad
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 3gad
no rotation
Molmil generated image of 3gad
rotated about x axis by 90°
Molmil generated image of 3gad
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3gad.pdb1.gz [68.3 KB])
Coordinate files for Biological unit (3gad.pdb2.gz [65.35 KB])