Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 509 results

2NTJ
DownloadVisualize
BU of 2ntj by Molmil
Mycobacterium tuberculosis InhA bound with PTH-NAD adduct
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH, {(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-PROPYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}M ETHYL [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE
Authors:Wang, F, Sacchettini, J.C.
Deposit date:2006-11-07
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of thioamide drug action against tuberculosis and leprosy.
J.Exp.Med., 204, 2007
2LQI
DownloadVisualize
BU of 2lqi by Molmil
NMR structure of FOXO3a transactivation domains (CR2C-CR3) in complex with CBP KIX domain (2l3b conformation)
Descriptor: CREB-binding protein, Forkhead box O3
Authors:Wang, F, Marshall, C.B, Yamamoto, K, Li, G.B, Gasmi-Seabrook, G.M.C, Okada, H, Mak, T.W, Ikura, M.
Deposit date:2012-03-06
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of KIX domain of CBP in complex with two FOXO3a transactivation domains reveal promiscuity and plasticity in coactivator recruitment.
Proc.Natl.Acad.Sci.USA, 109, 2012
5XSP
DownloadVisualize
BU of 5xsp by Molmil
The catalytic domain of GdpP with 5'-pApA
Descriptor: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-15
Release date:2018-01-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.146 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
5XT3
DownloadVisualize
BU of 5xt3 by Molmil
The catalytic domain of GdpP with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-16
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
7UQK
DownloadVisualize
BU of 7uqk by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7UQJ
DownloadVisualize
BU of 7uqj by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ATPgS and histone H3 tail in state II
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7, Histone H3, ...
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
7UQI
DownloadVisualize
BU of 7uqi by Molmil
Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7
Authors:Wang, F, Feng, X, Li, H.
Deposit date:2022-04-19
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly.
J.Biol.Chem., 299, 2022
2LQH
DownloadVisualize
BU of 2lqh by Molmil
NMR structure of FOXO3a transactivation domains (CR2C-CR3) in complex with CBP KIX domain (2b3l conformation)
Descriptor: CREB-binding protein, Forkhead box O3
Authors:Wang, F, Marshall, C.B, Yamamoto, K, Li, G.B, Gasmi-Seabrook, G.M.C, Okada, H, Mak, T.W, Ikura, M.
Deposit date:2012-03-06
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of KIX domain of CBP in complex with two FOXO3a transactivation domains reveal promiscuity and plasticity in coactivator recruitment.
Proc.Natl.Acad.Sci.USA, 109, 2012
5XSI
DownloadVisualize
BU of 5xsi by Molmil
The catalytic domain of GdpP
Descriptor: MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-14
Release date:2018-01-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
2NV6
DownloadVisualize
BU of 2nv6 by Molmil
Mycobacterium tuberculosis InhA (S94A) bound with INH-NAD adduct
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH, ISONICOTINIC-ACETYL-NICOTINAMIDE-ADENINE DINUCLEOTIDE
Authors:Wang, F, Sacchettini, J.C.
Deposit date:2006-11-10
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Transfer of a point mutation in Mycobacterium tuberculosis inhA resolves the target of isoniazid.
NAT.MED. (N.Y.), 12, 2006
5XSN
DownloadVisualize
BU of 5xsn by Molmil
The catalytic domain of GdpP with c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, MANGANESE (II) ION, Phosphodiesterase acting on cyclic dinucleotides
Authors:Wang, F, Gu, L.
Deposit date:2017-06-14
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
Biochem. J., 475, 2018
5XBW
DownloadVisualize
BU of 5xbw by Molmil
The structure of BrlR
Descriptor: Probable transcriptional regulator
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-21
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.109 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
6ANU
DownloadVisualize
BU of 6anu by Molmil
Cryo-EM structure of F-actin complexed with the beta-III-spectrin actin-binding domain
Descriptor: Actin, cytoplasmic 1, Spectrin beta chain, ...
Authors:Wang, F, Orlova, A, Avery, A.W, Hays, T.S, Egelman, E.H.
Deposit date:2017-08-14
Release date:2017-11-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis for high-affinity actin binding revealed by a beta-III-spectrin SCA5 missense mutation.
Nat Commun, 8, 2017
5XBI
DownloadVisualize
BU of 5xbi by Molmil
The structure of BrlR-C domain bound to 3-amino-2-phenazino(a pyocyanin analog)
Descriptor: 3-azanylphenazin-2-ol, DI(HYDROXYETHYL)ETHER, Probable transcriptional regulator
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-17
Release date:2018-03-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
5XBT
DownloadVisualize
BU of 5xbt by Molmil
The structure of BrlR bound to c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Wang, F, Qing, H, Gu, L.
Deposit date:2017-03-21
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.
Nat Commun, 9, 2018
7DE0
DownloadVisualize
BU of 7de0 by Molmil
Crystal structure of FtmOx1 Y224F mutation
Descriptor: FE (III) ION, FtmOx1
Authors:Wang, F, Gao, Y.Q, Gan, J.H, Cao, C.Y.
Deposit date:2020-10-31
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based Insights into Mechanism of Endoperoxidase FtmOx1 Catalyzed Reactions
Catalysis Science And Technology, 2023
7E0M
DownloadVisualize
BU of 7e0m by Molmil
Crystal structure of phospholipase D
Descriptor: Phospholipase, SULFATE ION
Authors:Wang, F.H.
Deposit date:2021-01-28
Release date:2021-12-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal Structure of a Phospholipase D from the Plant-Associated Bacteria Serratia plymuthica Strain AS9 Reveals a Unique Arrangement of Catalytic Pocket.
Int J Mol Sci, 22, 2021
7E9V
DownloadVisualize
BU of 7e9v by Molmil
The Crystal Structure of human UMP-CMP kinase from Biortus.
Descriptor: SULFATE ION, UMP-CMP kinase
Authors:Wang, F, Lin, D, Wang, R, Wei, X, Shen, Z, Wang, M.
Deposit date:2021-03-05
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of human UMP-CMP kinase from Biortus.
To Be Published
7E9W
DownloadVisualize
BU of 7e9w by Molmil
The Crystal Structure of D-psicose-3-epimerase from Biortus.
Descriptor: D-psicose 3-epimerase, GLYCEROL, MANGANESE (II) ION
Authors:Wang, F, Xu, C, Qi, J, Zhang, M, Tian, F, Wang, M.
Deposit date:2021-03-05
Release date:2021-03-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of D-psicose-3-epimerase from Biortus.
To Be Published
7ESF
DownloadVisualize
BU of 7esf by Molmil
The Crystal Structure of human MTH1 from Biortus
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL
Authors:Wang, F, Cheng, W, Shang, H, Wang, R, Zhang, B, Tian, F.
Deposit date:2021-05-10
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Crystal Structure of human MTH1 from Biortus
To Be Published
7DSF
DownloadVisualize
BU of 7dsf by Molmil
The Crystal Structure of human SPR from Biortus.
Descriptor: ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Sepiapterin reductase, ...
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Meng, Q, Zhang, B, Huang, Y.
Deposit date:2020-12-31
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of human SPR from Biortus.
To Be Published
7DS7
DownloadVisualize
BU of 7ds7 by Molmil
The Crystal Structure of Leaf-branch compost cutinase from Biortus.
Descriptor: CITRIC ACID, GLYCEROL, IMIDAZOLE, ...
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Chu, F, Xu, X, Tan, J.
Deposit date:2020-12-30
Release date:2021-01-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Crystal Structure of Leaf-branch compost cutinase from Biortus.
To Be Published
7D2C
DownloadVisualize
BU of 7d2c by Molmil
The Crystal Structure of human PARP14 from Biortus.
Descriptor: CHLORIDE ION, GLYCEROL, Protein mono-ADP-ribosyltransferase PARP14
Authors:Wang, F, Miao, Q, Lv, Z, Cheng, W, Lin, D, Xu, X, Tan, J.
Deposit date:2020-09-16
Release date:2020-09-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The Crystal Structure of human PARP14 from Biortus.
To Be Published
7CM2
DownloadVisualize
BU of 7cm2 by Molmil
The Crystal Structure of human USP7 USP domain from Biortus
Descriptor: GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Wang, F, Cheng, W, Lv, Z, Lin, D, Zhu, B, Miao, Q, Bao, X, Shang, H.
Deposit date:2020-07-24
Release date:2020-08-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Crystal Structure of human USP7 USP domain from Biortus.
To Be Published
7CVP
DownloadVisualize
BU of 7cvp by Molmil
The Crystal Structure of human PHGDH from Biortus.
Descriptor: D-3-phosphoglycerate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Miao, Q, Huang, Y.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of human PHGDH from Biortus.
To Be Published

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon