Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 171 件

4KCT
DownloadVisualize
BU of 4kct by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with Oxaloacetate
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-04-24
公開日2014-01-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4KCV
DownloadVisualize
BU of 4kcv by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with 2-oxoglutaric acid
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, 2-OXOGLUTARIC ACID, GLYCEROL, ...
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-04-24
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4KCU
DownloadVisualize
BU of 4kcu by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with D-Malate
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, D-MALATE, MAGNESIUM ION, ...
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-04-24
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4KRZ
DownloadVisualize
BU of 4krz by Molmil
Apo crystal structure of pyruvate kinase (PYK) from Trypanosoma cruzi
分子名称: GLYCEROL, POTASSIUM ION, Pyruvate kinase
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-05-17
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014
4KCW
DownloadVisualize
BU of 4kcw by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with oxalate
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-04-24
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4HYV
DownloadVisualize
BU of 4hyv by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei in the presence of Magnesium, PEP and F26BP
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, CHLORIDE ION, GLYCEROL, ...
著者Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2012-11-14
公開日2013-09-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献`In crystallo' substrate binding triggers major domain movements and reveals magnesium as a co-activator of Trypanosoma brucei pyruvate kinase.
Acta Crystallogr.,Sect.D, 69, 2013
4KS0
DownloadVisualize
BU of 4ks0 by Molmil
Pyruvate kinase (PYK) from Trypanosoma cruzi in the presence of Magnesium, oxalate and F26BP
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, OXALATE ION, ...
著者Morgan, H.P, Zhong, W, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2013-05-17
公開日2014-11-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014
5LUD
DownloadVisualize
BU of 5lud by Molmil
Structure of Cyclophilin A in complex with 2,3-Diaminopyridine
分子名称: Peptidyl-prolyl cis-trans isomerase, pyridine-2,3-diamine
著者McNae, I.W, Nowicki, M.W, Blackburn, E.A, Wear, M.A, Walkinshaw, M.D.
登録日2016-09-08
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Thermo-kinetic analysis space expansion for cyclophilin-ligand interactions - identification of a new nonpeptide inhibitor using BiacoreTM T200.
FEBS Open Bio, 7, 2017
3IGY
DownloadVisualize
BU of 3igy by Molmil
Crystal structures of Leishmania mexicana phosphoglycerate mutase at high cobalt concentrations
分子名称: 2-PHOSPHOGLYCERIC ACID, 3-PHOSPHOGLYCERIC ACID, COBALT (II) ION, ...
著者Nowicki, M.W, Kuaprasert, B, McNae, I.W, Morgan, H.P, Harding, M.M, Michels, P.A, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2009-07-29
公開日2009-10-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Crystal structures of Leishmania mexicana phosphoglycerate mutase suggest a one-metal mechanism and a new enzyme subclass
J.Mol.Biol., 394, 2009
3IGZ
DownloadVisualize
BU of 3igz by Molmil
Crystal structures of Leishmania mexicana phosphoglycerate mutase at low cobalt concentration
分子名称: 2-PHOSPHOGLYCERIC ACID, 3-PHOSPHOGLYCERIC ACID, COBALT (II) ION, ...
著者Nowicki, M.W, Kuaprasert, B, McNae, I.W, Morgan, H.P, Harding, M.M, Michels, P.A, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
登録日2009-07-29
公開日2009-10-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of Leishmania mexicana phosphoglycerate mutase suggest a one-metal mechanism and a new enzyme subclass
J.Mol.Biol., 394, 2009
3HOT
DownloadVisualize
BU of 3hot by Molmil
Crystal structure of the Mos1 mariner paired end complex with Mn
分子名称: MANGANESE (II) ION, Mos1 NTS inverted repeat DNA, Mos1 TS inverted repeat DNA, ...
著者Richardson, J.M, Walkinshaw, M.D.
登録日2009-06-03
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Molecular architecture of the Mos1 paired-end complex: the structural basis of DNA transposition in a eukaryote
Cell(Cambridge,Mass.), 138, 2009
4WJ8
DownloadVisualize
BU of 4wj8 by Molmil
Human Pyruvate Kinase M2 Mutant C424A
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
著者Mitchell, T, Yuan, M, McNae, I, Morgan, H, Walkinshaw, M.D.
登録日2014-09-29
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Human Pyruvate Kinase M2 Mutant C424A
To Be Published
3KTX
DownloadVisualize
BU of 3ktx by Molmil
Crystal structure of Leishmania mexicana pyruvate kinase (LmPYK)in complex with 1,3,6,8-pyrenetetrasulfonic acid
分子名称: GLYCEROL, Pyruvate kinase, pyrene-1,3,6,8-tetrasulfonic acid
著者Morgan, H.P, Walkinshaw, M.D.
登録日2009-11-26
公開日2010-02-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An improved strategy for the crystallization of Leishmania mexicana pyruvate kinase.
Acta Crystallogr.,Sect.F, 66, 2010
3HQN
DownloadVisualize
BU of 3hqn by Molmil
Apo crystal structure of Leishmania mexicana(LmPYK)pyruvate kinase
分子名称: GLYCEROL, POTASSIUM ION, Pyruvate kinase, ...
著者Morgan, H.P, Walkinshaw, M.D.
登録日2009-06-08
公開日2010-02-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The allosteric mechanism of pryuvate kinase from Leishmania mexicana: a rock and lock model
J.Biol.Chem., 285, 2010
3HQP
DownloadVisualize
BU of 3hqp by Molmil
Crystal structure of Leishmania mexicana pyruvate kinase (LmPYK) in complex with ATP, Oxalate and fructose 2,6 bisphosphate
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Morgan, H.P, Walkinshaw, M.D.
登録日2009-06-08
公開日2010-02-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The allosteric mechanism of pryuvate kinase from Leishmania mexicana: a rock and lock model
J.Biol.Chem., 285, 2010
3I2Z
DownloadVisualize
BU of 3i2z by Molmil
Structure of cold shock protein E from Salmonella typhimurium
分子名称: RNA chaperone, negative regulator of cspA transcription
著者Morgan, H.P, McNae, I, Wear, M.A, Gallagher, M, Walkinshaw, M.D.
登録日2009-06-30
公開日2009-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystallization and X-ray structure of cold-shock protein E from Salmonella typhimurium
Acta Crystallogr.,Sect.F, 65, 2009
3HQO
DownloadVisualize
BU of 3hqo by Molmil
Crystal structures of Leishmania mexicana pyruvate kinase (LmPYK) in complex with ATP and Oxalate
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, OXALATE ION, ...
著者Morgan, H.P, Walkinshaw, M.D.
登録日2009-06-08
公開日2010-02-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The allosteric mechanism of pryuvate kinase from Leishmania mexicana: a rock and lock model
J.Biol.Chem., 285, 2010
3HQQ
DownloadVisualize
BU of 3hqq by Molmil
Crystal structure of Leishmania mexicana pyruvate kinase (LmPYK) in complex with Fructose 2,6 bisphosphate
分子名称: 2,6-di-O-phosphono-beta-D-fructofuranose, Pyruvate kinase
著者Morgan, H.P, Walkinshaw, M.D.
登録日2009-06-08
公開日2010-02-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (5.07 Å)
主引用文献The allosteric mechanism of pryuvate kinase from Leishmania mexicana: a rock and lock model
J.Biol.Chem., 285, 2010
3HOS
DownloadVisualize
BU of 3hos by Molmil
Crystal structure of the mariner Mos1 paired end complex with Mg
分子名称: MAGNESIUM ION, Mos1 NTS inverted repeat DNA, Mos1 TS inverted repeat DNA, ...
著者Richardson, J.M, Walkinshaw, M.D.
登録日2009-06-03
公開日2009-09-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular architecture of the Mos1 paired-end complex: the structural basis of DNA transposition in a eukaryote
Cell(Cambridge,Mass.), 138, 2009
6GG5
DownloadVisualize
BU of 6gg5 by Molmil
Crystal structure of M2 PYK in complex with Tryptophan.
分子名称: PHOSPHATE ION, POTASSIUM ION, Pyruvate kinase PKM, ...
著者McNae, I.W, Yuan, M, Walkinshaw, M.D.
登録日2018-05-02
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
6GJJ
DownloadVisualize
BU of 6gjj by Molmil
Cyclophilin A complexed with tri-vector ligand 2.
分子名称: Peptidyl-prolyl cis-trans isomerase A, ethyl 2-[[(4-aminophenyl)methyl-propyl-carbamoyl]amino]ethanoate
著者Georgiou, C, De Simone, A, Walkinshaw, M.D, Michel, J.
登録日2018-05-16
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors.
Chem Sci, 10, 2019
6GJI
DownloadVisualize
BU of 6gji by Molmil
Cyclophilin A complexed with the tri-vector ligand 8.
分子名称: GLYCEROL, Peptidyl-prolyl cis-trans isomerase A, ethyl 2-[[(4-aminophenyl)methyl-[(1-methyl-1,2,3-triazol-4-yl)methyl]carbamoyl]amino]ethanoate
著者Georgiou, C, De Simone, A, Walkinshaw, M.D, Michel, J.
登録日2018-05-16
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors.
Chem Sci, 10, 2019
6GG6
DownloadVisualize
BU of 6gg6 by Molmil
Crystal structure of M2 PYK in complex with Serine.
分子名称: MAGNESIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
著者McNae, I.W, Yuan, M, Walkinshaw, M.D.
登録日2018-05-02
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
6GG3
DownloadVisualize
BU of 6gg3 by Molmil
Crystal structure of M2 PYK in complex with Alanine.
分子名称: ALANINE, PHOSPHATE ION, Pyruvate kinase PKM
著者McNae, I.W, Yuan, M, Walkinshaw, M.D.
登録日2018-05-02
公開日2019-09-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.72 Å)
主引用文献An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem.J., 475, 2018
6GJM
DownloadVisualize
BU of 6gjm by Molmil
Cyclophilin A complexed with tri-vector ligand 4.
分子名称: Peptidyl-prolyl cis-trans isomerase A, ethyl 2-[[(4-aminophenyl)methyl-propyl-carbamoyl]amino]ethanoate
著者Georgiou, C, De Simone, A, Walkinshaw, M.D, Michel, J.
登録日2018-05-16
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.354 Å)
主引用文献A computationally designed binding mode flip leads to a novel class of potent tri-vector cyclophilin inhibitors.
Chem Sci, 10, 2019

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon