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PDB: 578 件

7YEJ
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BU of 7yej by Molmil
TR-SFX MmCPDII-DNA complex: 100 ns time-point collected in SACLA. Includes 100 ns, dark, and extrapolated structure factors
分子名称: CPD photolesion containing DNA after repair, Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2022-07-05
公開日2023-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Visualizing the DNA repair process by a photolyase at atomic resolution.
Science, 382, 2023
7YDZ
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BU of 7ydz by Molmil
TR-SFX MmCPDII-DNA complex: dark state as collected in SACLA
分子名称: CPD photolesion containing DNA, Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2022-07-05
公開日2023-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Visualizing the DNA repair process by a photolyase at atomic resolution.
Science, 382, 2023
7YEE
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BU of 7yee by Molmil
TR-SFX MmCPDII-DNA complex: 10 ns snapshot. Includes 10 ns, dark, and extrapolated structure factors. Collected at SwissFEL
分子名称: CPD photolesion containing DNA, Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2022-07-05
公開日2023-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Visualizing the DNA repair process by a photolyase at atomic resolution.
Science, 382, 2023
8G13
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BU of 8g13 by Molmil
CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Choi, W.Y, Wu, H, Cheng, Y.F.
登録日2023-02-01
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G14
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CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress, class2
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Choi, W.Y, Wu, H, Cheng, Y.F.
登録日2023-02-01
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
5HEC
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BU of 5hec by Molmil
CgT structure in dimer
分子名称: Putative glycosyltransferase (GalT1)
著者Zhang, H, Wu, H.
登録日2016-01-05
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献New Helical Binding Domain Mediates a Glycosyltransferase Activity of a Bifunctional Protein.
J.Biol.Chem., 291, 2016
8G15
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CryoEM structure of nuclear GAPDH under 24h Oxidative Stress
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Choi, W.Y, Wu, H, Cheng, Y.F.
登録日2023-02-01
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.07 Å)
主引用文献Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G16
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BU of 8g16 by Molmil
CryoEM structure of cytoplasmic GAPDH under 24h Oxidative Stress
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Choi, W.Y, Wu, H, Cheng, Y.F.
登録日2023-02-01
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.07 Å)
主引用文献Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G12
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BU of 8g12 by Molmil
CryoEM structure of nuclear GAPDH under 8h Oxidative Stress
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Choi, W.Y, Wu, H, Cheng, Y.F.
登録日2023-02-01
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (2.17 Å)
主引用文献Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
8G17
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BU of 8g17 by Molmil
CryoEM structure of wild-type GAPDH
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Choi, W.Y, Wu, H, Cheng, Y.F.
登録日2023-02-01
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM.
Proc.Natl.Acad.Sci.USA, 120, 2023
2IGQ
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BU of 2igq by Molmil
Human euchromatic histone methyltransferase 1
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, euchromatic histone methyltransferase 1
著者Min, J, Wu, H, Antoshenko, T, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-09-23
公開日2006-10-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural biology of human H3K9 methyltransferases
Plos One, 5, 2010
7VJ6
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BU of 7vj6 by Molmil
SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the semiquinone state
分子名称: DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
2IIP
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BU of 2iip by Molmil
Human Nicotinamide N-methyltransferase
分子名称: Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Bernstein, G, Min, J, Wu, H, Tempel, W, Zeng, H, Loppnau, P, Avvakumov, G.V, Wasney, G, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-09-28
公開日2006-10-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Crystal Structure of Human Nicotinamide N-methyltransferase in complex with SAH
To be Published
7VJ7
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BU of 7vj7 by Molmil
SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the fully reduced state
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
7VJ8
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BU of 7vj8 by Molmil
SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the oxidized state
分子名称: DNA photolyase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-09-28
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
2H00
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BU of 2h00 by Molmil
Human methyltransferase 10 domain containing protein
分子名称: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Min, J.R, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-05-12
公開日2006-06-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of Human methyltransferase 10 domain containing protein.
To be Published
3MEK
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BU of 3mek by Molmil
Crystal Structure of Human Histone-Lysine N-methyltransferase SMYD3 in Complex with S-adenosyl-L-methionine
分子名称: S-ADENOSYLMETHIONINE, SET and MYND domain-containing protein 3, ZINC ION
著者Lam, R, Dombrovski, L, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Wu, H, Structural Genomics Consortium (SGC)
登録日2010-03-31
公開日2010-04-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Human Histone-Lysine N-methyltransferase SMYD3 in Complex with S-adenosyl-L-methionine
To be Published
1SO8
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BU of 1so8 by Molmil
Abeta-bound human ABAD structure [also known as 3-hydroxyacyl-CoA dehydrogenase type II (Type II HADH), Endoplasmic reticulum-associated amyloid beta-peptide binding protein (ERAB)]
分子名称: 3-hydroxyacyl-CoA dehydrogenase type II, CHLORIDE ION, SODIUM ION
著者Lustbader, J.W, Cirilli, M, Wu, H.
登録日2004-03-13
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献ABAD directly links Abeta to mitochondrial toxicity in Alzheimer's disease.
Science, 304, 2004
2I62
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BU of 2i62 by Molmil
Mouse Nicotinamide N-methyltransferase
分子名称: Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-08-27
公開日2006-09-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of Mouse Nicotinamide N-methyltransferase in complex with SAH
To be Published
2HUZ
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BU of 2huz by Molmil
Crystal structure of GNPNAT1
分子名称: Glucosamine 6-phosphate N-acetyltransferase
著者Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-07-27
公開日2006-08-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Crystal structure of glucosamine-phosphate N-acetyltransferase 1
To be Published
3HCS
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BU of 3hcs by Molmil
Crystal structure of the N-terminal domain of TRAF6
分子名称: TNF receptor-associated factor 6, ZINC ION
著者Yin, Q, Lin, S.-C, Lamothe, B, Lu, M, Lo, Y.-C, Hura, G, Zheng, L, Rich, R.L, Campos, A.D, Myszka, D.G, Lenardo, M.J, Darnay, B.G, Wu, H.
登録日2009-05-06
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献E2 interaction and dimerization in the crystal structure of TRAF6.
Nat.Struct.Mol.Biol., 16, 2009
3HCU
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BU of 3hcu by Molmil
Crystal structure of TRAF6 in complex with Ubc13 in the C2 space group
分子名称: TNF receptor-associated factor 6, Ubiquitin-conjugating enzyme E2 N, ZINC ION
著者Yin, Q, Lin, S.-C, Lamothe, B, Lu, M, Lo, Y.-C, Hura, G, Zheng, L, Rich, R.L, Campos, A.D, Myszka, D.G, Lenardo, M.J, Darnay, B.G, Wu, H.
登録日2009-05-06
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献E2 interaction and dimerization in the crystal structure of TRAF6.
Nat.Struct.Mol.Biol., 16, 2009
2IPX
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BU of 2ipx by Molmil
Human Fibrillarin
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CALCIUM ION, rRNA 2'-O-methyltransferase fibrillarin
著者Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-10-12
公開日2006-10-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献The Crystal Structure of Human Fibrillarin in complex with SAH
To be Published
3DKB
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BU of 3dkb by Molmil
Crystal Structure of A20, 2.5 angstrom
分子名称: Tumor necrosis factor, alpha-induced protein 3
著者Lin, S.-C, Chung, J.Y, Lo, Y.-C, Wu, H.
登録日2008-06-24
公開日2008-07-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular basis for the unique deubiquitinating activity of the NF-kappaB inhibitor A20
J.Mol.Biol., 376, 2008
5HEA
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BU of 5hea by Molmil
CgT structure in hexamer
分子名称: Putative glycosyltransferase (GalT1)
著者Zhang, H, Wu, H.
登録日2016-01-05
公開日2016-08-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献A new helical binding domain mediates a glycosyltransferase activity of a bifunctional protein
To Be Published

221051

件を2024-06-12に公開中

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