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PDB: 12929 results

4KGT
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BU of 4kgt by Molmil
Backbone Modifications in the Protein GB1 Turns: Aib10, D-Pro47
Descriptor: Streptococcal Protein GB1 Backbone Modified Variant: Aib10, D-Pro47
Authors:Reinert, Z.E, Lengyel, G.A, Horne, W.S.
Deposit date:2013-04-29
Release date:2013-09-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein-like Tertiary Folding Behavior from Heterogeneous Backbones.
J.Am.Chem.Soc., 135, 2013
7B4M
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BU of 7b4m by Molmil
CryoEM structure of the human sodium proton exchanger NHA2 in nanodisc
Descriptor: Sodium/hydrogen exchanger 9B2
Authors:Woehlert, D, Kuhlbrandt, W, Yildiz, O.
Deposit date:2020-12-02
Release date:2022-01-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:CryoEM structure of the human sodium proton exchanger NHA2 in nanodisc
To Be Published
7B4L
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BU of 7b4l by Molmil
CryoEM structure of the human sodium proton exchanger NHA2
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Sodium/hydrogen exchanger 9B2, ...
Authors:Woehlert, D, Kuhlbrandt, W, Yildiz, O.
Deposit date:2020-12-02
Release date:2022-01-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:CryoEM structure of the human sodium proton exchanger NHA2
To Be Published
7B2P
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BU of 7b2p by Molmil
Cryo-EM structure of complement C4b in complex with nanobody B5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C4 alpha chain, ...
Authors:Oosterheert, W, De la O Becerra, K.I, Gros, P.
Deposit date:2020-11-27
Release date:2022-03-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Multifaceted Activities of Seven Nanobodies against Complement C4b.
J Immunol., 208, 2022
7B2Q
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BU of 7b2q by Molmil
Cryo-EM structure of complement C4b in complex with nanobody B12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-C4b nanobody B12, ...
Authors:Oosterheert, W, De la O Becerra, K.I, Gros, P.
Deposit date:2020-11-27
Release date:2022-03-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Multifaceted Activities of Seven Nanobodies against Complement C4b.
J Immunol., 208, 2022
7B2M
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BU of 7b2m by Molmil
Cryo-EM structure of complement C4b in complex with nanobody E3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-C4b nanobody E3, Complement C4 alpha chain, ...
Authors:Oosterheert, W, De la O Becerra, K.I, van den Bos, R.M, Gros, P.
Deposit date:2020-11-27
Release date:2022-03-02
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Multifaceted Activities of Seven Nanobodies against Complement C4b.
J Immunol., 208, 2022
7DXE
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BU of 7dxe by Molmil
Structure of TRPC3 gain of function mutation R803C at 3.2 angstrom in 1340nM free calcium state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHOLESTEROL HEMISUCCINATE, Short transient receptor potential channel 3, ...
Authors:Chen, L, Guo, W.
Deposit date:2021-01-18
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural mechanism of human TRPC3 and TRPC6 channel regulation by their intracellular calcium-binding sites.
Neuron, 110, 2022
7DXB
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Structure of TRPC3 at 2.7 angstrom in high calcium state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Chen, L, Guo, W.
Deposit date:2021-01-18
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural mechanism of human TRPC3 and TRPC6 channel regulation by their intracellular calcium-binding sites.
Neuron, 110, 2022
7E4P
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BU of 7e4p by Molmil
Crystal structure of tubulin in complex with Ansamitocin P3
Descriptor: (1S,2S,3S,5S,6S,16Z,18Z,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl 2-methylpropanoate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wang, Y, Li, W.
Deposit date:2021-02-14
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:C3 Ester Side Chain Plays a Pivotal Role in the Antitumor Activity of Maytansinoids
To Be Published
7E4S
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BU of 7e4s by Molmil
Crystal structure of Lactobacillus rhamnosus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI complexed with HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-dehydro-4-deoxy-D-glucuronate isomerase, ZINC ION
Authors:Yamamoto, Y, Takase, R, Mikami, B, Hashimoto, W.
Deposit date:2021-02-15
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structures of Lacticaseibacillus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI in complex with substrate analogs
J.Appl.Glyosci., 2023
7E4Y
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BU of 7e4y by Molmil
Crystal structure of tubulin in complex with L-DM4-SMe
Descriptor: (1S,2S,3S,5R,6S,16E,18E,20S,21R)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl (2S)-2-{methyl[3-methyl-3-(methyldisulfanyl)butanoyl]amino}propanoate (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wang, Y, Li, W.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.708 Å)
Cite:C3 Ester Side Chain Plays a Pivotal Role in the Antitumor Activity of Maytansinoids
To Be Published
7E8L
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BU of 7e8l by Molmil
The structure of Spodoptera litura chemosensory protein
Descriptor: Putative chemosensory protein CSP8
Authors:Xie, W, Jia, Q, Zeng, H, Xiao, N, Tang, J, Gao, S, Zhang, J.
Deposit date:2021-03-02
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of the Spodoptera litura Chemosensory Protein CSP8.
Insects, 12, 2021
7E9U
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BU of 7e9u by Molmil
Trehalase of Arabidopsis thaliana
Descriptor: GLYCEROL, PHOSPHATE ION, SODIUM ION, ...
Authors:Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
Deposit date:2021-03-05
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7E9X
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BU of 7e9x by Molmil
Trehalase of Arabidopsis thaliana acid mutant -D380A
Descriptor: GLYCEROL, Trehalase
Authors:Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
Deposit date:2021-03-05
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7EAW
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BU of 7eaw by Molmil
Trehalase of Arabidopsis thaliana acid mutant -D380A trehalose complex
Descriptor: GLYCEROL, Trehalase, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
Deposit date:2021-03-08
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7EFS
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BU of 7efs by Molmil
Fructose-bisphosphate aldolase in Artemisia sieversiana pollen
Descriptor: Fructose-bisphosphate aldolase
Authors:Li, Z, Wei, C, Ji Fu, W, Zhi Qiang, X.
Deposit date:2021-03-23
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of fructose-bisphosphate aldose as a novel type of major allergen from Artemisia pollen
To Be Published
7EEY
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BU of 7eey by Molmil
The structure of the N-terminal doamin of the Schizosaccharomyces pombe Tad2 adenosine deaminase
Descriptor: SULFATE ION, tRNA-specific adenosine deaminase subunit tad2
Authors:Xie, W, Liu, X, Zhou, J.
Deposit date:2021-03-19
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Functional and structural investigation of N-terminal domain of the SpTad2/3 heterodimeric tRNA deaminase.
Comput Struct Biotechnol J, 19, 2021
7ELK
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BU of 7elk by Molmil
Solution structure of Terfa derived from Danio rerio
Descriptor: Terfa protein
Authors:Yun, J.H, Kim, M, Lee, W.
Deposit date:2021-04-11
Release date:2022-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Terfa derived from Danio rerio
To Be Published
7EN6
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BU of 7en6 by Molmil
The crystal structure of Escherichia coli MurR in apo form
Descriptor: HTH-type transcriptional regulator MurR, PHOSPHATE ION
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.276 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EN5
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BU of 7en5 by Molmil
The crystal structure of Escherichia coli MurR in complex with N-acetylglucosamine-6-phosphate
Descriptor: 2-METHOXYETHANOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EN7
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BU of 7en7 by Molmil
The crystal structure of Escherichia coli MurR in complex with N-acetylmuramic-acid-6-phosphate
Descriptor: (2R)-2-[(2R,3R,4R,5S,6R)-3-acetamido-2,5-bis(oxidanyl)-6-(phosphonooxymethyl)oxan-4-yl]oxypropanoic acid, HTH-type transcriptional regulator MurR
Authors:Zhang, Y, Chen, W, Ji, Q.
Deposit date:2021-04-16
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Molecular basis for cell-wall recycling regulation by transcriptional repressor MurR in Escherichia coli.
Nucleic Acids Res., 50, 2022
7EMJ
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BU of 7emj by Molmil
Crystal structure of T2R-TTL-Barbigerone complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 8,8-dimethyl-3-(2,4,5-trimethoxyphenyl)pyrano[2,3-f]chromen-4-one, CALCIUM ION, ...
Authors:Yang, J.H, Yan, W.
Deposit date:2021-04-14
Release date:2022-04-20
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of tubulin-barbigerone complex enables rational design of potent anticancer agents with isoflavone skeleton.
Phytomedicine, 109, 2023
7EN3
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BU of 7en3 by Molmil
Crystal structure of tubulin in complex with Tubulysin analogue TGL
Descriptor: (2S,4R)-5-(4-fluorophenyl)-2-methyl-4-[[2-[(1R,3R)-4-methyl-3-[5-methylhexyl-[(2S,3S)-3-methyl-2-[[(2R)-1-methylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-1-oxidanyl-pentyl]-1,3-thiazol-4-yl]carbonylamino]pentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wang, Y, Li, W.
Deposit date:2021-04-15
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.643 Å)
Cite:The X-ray structure of tubulysin analogue TGL in complex with tubulin and three possible routes for the development of next-generation tubulysin analogues.
Biochem.Biophys.Res.Commun., 565, 2021
4KGS
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BU of 4kgs by Molmil
Backbone Modifications in the Protein GB1 Loops: beta-3-Val21, beta-3-Asp40
Descriptor: GLYCEROL, Streptococcal Protein GB1 Backbone Modified Variant: beta-3-Val21, beta-3-Asp40
Authors:Reinert, Z.E, Lengyel, G.A, Horne, W.S.
Deposit date:2013-04-29
Release date:2013-09-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Protein-like Tertiary Folding Behavior from Heterogeneous Backbones.
J.Am.Chem.Soc., 135, 2013
4KCA
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BU of 4kca by Molmil
Crystal Structure of Endo-1,5-alpha-L-arabinanase from a Bovine Ruminal Metagenomic Library
Descriptor: Endo-1,5-alpha-L-arabinanase, GLYCEROL, IODIDE ION, ...
Authors:Santos, C.R, Polo, C.C, Costa, M.C.M.F, Nascimento, A.F.Z, Wong, D.W.S, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014

223532

数据于2024-08-07公开中

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