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PDB: 12895 results

4KNF
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BU of 4knf by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin double-mutant D97N/Q105L from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-09
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
4E8D
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BU of 4e8d by Molmil
Crystal structure of streptococcal beta-galactosidase
Descriptor: GLYCEROL, Glycosyl hydrolase, family 35
Authors:Cheng, W, Wang, L, Bai, X.H, Jiang, Y.L, Li, Q, Yu, G, Zhou, C.Z, Chen, Y.X.
Deposit date:2012-03-20
Release date:2012-05-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the substrate specificity of Streptococcus pneumoniae beta (1,3)-galactosidase BgaC
J.Biol.Chem., 287, 2012
4KO7
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BU of 4ko7 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48F/V95I)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Meng, W, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48F/V95I)
To be Published
4IU9
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BU of 4iu9 by Molmil
Crystal structure of a membrane transporter
Descriptor: Nitrite extrusion protein 2
Authors:Yan, H, Huang, W, Yan, C, Gong, X, Jiang, S, Zhao, Y, Wang, J, Shi, Y.
Deposit date:2013-01-20
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Structure and mechanism of a nitrate transporter.
Cell Rep, 3, 2013
4E8C
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BU of 4e8c by Molmil
Crystal structure of streptococcal beta-galactosidase in complex with galactose
Descriptor: GLYCEROL, Glycosyl hydrolase, family 35, ...
Authors:Cheng, W, Wang, L, Bai, X.H, Jiang, Y.L, Li, Q, Yu, G, Zhou, C.Z, Chen, Y.X.
Deposit date:2012-03-20
Release date:2012-05-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insights into the substrate specificity of Streptococcus pneumoniae beta (1,3)-galactosidase BgaC
J.Biol.Chem., 287, 2012
4EDU
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BU of 4edu by Molmil
The MBT repeats of human SCML2 in a complex with histone H2A peptide
Descriptor: Histone H2A.J peptide, Sex comb on midleg-like protein 2
Authors:Nady, N, Amaya, M.F, Tempel, W, Ravichandran, M, Arrowsmith, C.H.
Deposit date:2012-03-27
Release date:2012-09-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Histone recognition by human malignant brain tumor domains.
J.Mol.Biol., 423, 2012
4EB3
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BU of 4eb3 by Molmil
Crystal structure of IspH in complex with iso-HMBPP
Descriptor: 3-(hydroxymethyl)but-3-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Wang, W, Wang, K, Span, I, Bacher, A, Groll, M, Oldfield, E.
Deposit date:2012-03-23
Release date:2013-02-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Are free radicals involved in IspH catalysis? An EPR and crystallographic investigation.
J.Am.Chem.Soc., 134, 2012
4KLY
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BU of 4kly by Molmil
Crystal structure of a blue-light absorbing proteorhodopsin mutant D97N from HOT75
Descriptor: Blue-light absorbing proteorhodopsin, RETINAL
Authors:Ran, T, Ozorowski, G, Gao, Y, Wang, W, Luecke, H.
Deposit date:2013-05-07
Release date:2013-06-05
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cross-protomer interaction with the photoactive site in oligomeric proteorhodopsin complexes.
Acta Crystallogr.,Sect.D, 69, 2013
4KOW
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BU of 4kow by Molmil
Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with Cefoxitin
Descriptor: 1,2-ETHANEDIOL, CEFOXITIN, SULFATE ION, ...
Authors:Majorek, K.A, Porebski, P.J, Chruszcz, M, Grabowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-12
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural, Functional, and Inhibition Studies of a Gcn5-related N-Acetyltransferase (GNAT) Superfamily Protein PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 288, 2013
4EN0
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BU of 4en0 by Molmil
Crystal structure of light
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, PHOSPHATE ION, ...
Authors:Zhan, C, Liu, W, Patskovsky, Y, Ramagopal, U.A, Bonanno, J.B, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-04-12
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Mechanistic basis for functional promiscuity in the TNF and TNF receptor superfamilies: structure of the LIGHT:DcR3 assembly.
Structure, 22, 2014
3RPX
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BU of 3rpx by Molmil
Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
Descriptor: Complement component 1 Q subcomponent-binding protein, UNKNOWN ATOM OR ION
Authors:Tempel, W, Tong, Y, Crombet, L, Shen, Y, Guan, X, Nedyalkova, L, Walker, J.R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2011-04-27
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
to be published
4KDT
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BU of 4kdt by Molmil
Structure of an early native-like intermediate of beta2-microglobulin amyloidosis
Descriptor: Beta-2-microglobulin, GLYCEROL, Nanobody24, ...
Authors:Vanderhaegen, S, Fislage, M, Pardon, E, Versees, W, Steyaert, J.
Deposit date:2013-04-25
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an early native-like intermediate of beta 2-microglobulin amyloidogenesis.
Protein Sci., 22, 2013
4K65
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BU of 4k65 by Molmil
Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Zhang, W, Shi, Y, Lu, X, Shu, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-15
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:An airborne transmissible avian influenza H5 hemagglutinin seen at the atomic level.
Science, 340, 2013
4J5H
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BU of 4j5h by Molmil
Crystal Structure of B. thuringiensis AiiA mutant F107W with N-decanoyl-L-homoserine bound at the active site
Descriptor: GLYCEROL, N-acyl homoserine lactonase, N-decanoyl-L-homoserine, ...
Authors:Liu, C.F, Liu, D, Momb, J, Thomas, P.W, Lajoie, A, Petsko, G.A, Fast, W, Ringe, D.
Deposit date:2013-02-08
Release date:2013-06-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A phenylalanine clamp controls substrate specificity in the quorum-quenching metallo-gamma-lactonase from Bacillus thuringiensis.
Biochemistry, 52, 2013
4JWF
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BU of 4jwf by Molmil
Crystal structure of spTrm10(74)-SAH complex
Descriptor: ACETIC ACID, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine(9)-N1)-methyltransferase
Authors:Yan, W, Shao, Z.
Deposit date:2013-03-27
Release date:2013-10-16
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrate.
Nucleic Acids Res., 42, 2014
3R1D
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BU of 3r1d by Molmil
Crystal structure of GC(8BrG)GCGGCGGC duplex
Descriptor: BROMIDE ION, RNA (5'-R(*GP*CP*(GRB)P*GP*CP*GP*GP*CP*GP*GP*C)-3'), SULFATE ION
Authors:Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
Deposit date:2011-03-10
Release date:2011-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structures of CGG RNA repeats with implications for fragile X-associated tremor ataxia syndrome.
Nucleic Acids Res., 39, 2011
3R77
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BU of 3r77 by Molmil
Crystal structure of the D38A mutant of isochorismatase PhzD from Pseudomonas fluorescens 2-79 in complex with 2-amino-2-desoxyisochorismate ADIC
Descriptor: (5S,6S)-6-amino-5-[(1-carboxyethenyl)oxy]cyclohexa-1,3-diene-1-carboxylic acid, CHLORIDE ION, Probable isochorismatase
Authors:Li, Q.A, Mavrodi, D.V, Thomashow, L.S, Roessle, M, Blankenfeldt, W.
Deposit date:2011-03-22
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand Binding Induces an Ammonia Channel in 2-Amino-2-desoxyisochorismate (ADIC) Synthase PhzE.
J.Biol.Chem., 286, 2011
4ET8
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BU of 4et8 by Molmil
Hen egg-white lysozyme solved from 40 fs free-electron laser pulse data
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Boutet, S, Lomb, L, Williams, G, Barends, T, Aquila, A, Doak, R.B, Weierstall, U, DePonte, D, Steinbrener, J, Shoeman, R, Messerschmidt, M, Barty, A, White, T, Kassemeyer, S, Kirian, R, Seibert, M, Montanez, P, Kenney, C, Herbst, R, Hart, P, Pines, J, Haller, G, Gruner, S, Philllip, H, Tate, M, Hromalik, M, Koerner, L, van Bakel, N, Morse, J, Ghonsalves, W, Arnlund, D, Bogan, M, Calemann, C, Fromme, R, Hampton, C, Hunter, M, Johansson, L, Katona, G, Kupitz, C, Liang, M, Martin, A, Nass, K, Redecke, L, Stellato, F, Timneanu, N, Wang, D, Zatsepin, N, Schafer, D, Defever, K, Neutze, R, Fromme, P, Spence, J, Chapman, H, Schlichting, I.
Deposit date:2012-04-24
Release date:2012-06-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution protein structure determination by serial femtosecond crystallography.
Science, 337, 2012
4KO5
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BU of 4ko5 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48L/V95I/Y108F)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Wang, Y, Meng, W, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48L/V95I/Y108F)
To be Published
4KOS
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BU of 4kos by Molmil
Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with Cefmetazole
Descriptor: (6R,7S)-7-({[(cyanomethyl)sulfanyl]acetyl}amino)-7-methoxy-3-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-8-oxo-5-thia -1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid, 1,2-ETHANEDIOL, SULFATE ION, ...
Authors:Majorek, K.A, Chruszcz, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-12
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural, Functional, and Inhibition Studies of a Gcn5-related N-Acetyltransferase (GNAT) Superfamily Protein PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 288, 2013
4KOY
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BU of 4koy by Molmil
Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with Cephalosporin C
Descriptor: 1,2-ETHANEDIOL, 4-(3-ACETOXYMETHYL-2-CARBOXY-8-OXO-5-THIA-1-AZA-BICYCLO[4.2.0]OCT-2-EN-7-YLCARBAMOYL)-1-CARBOXY-BUTYL-AMMONIUM, SULFATE ION, ...
Authors:Majorek, K.A, Porebski, P.J, Chruszcz, M, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-12
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural, Functional, and Inhibition Studies of a Gcn5-related N-Acetyltransferase (GNAT) Superfamily Protein PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 288, 2013
4ED8
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BU of 4ed8 by Molmil
Human DNA polymerase eta - DNA ternary complex: Reaction in the TG crystal at pH 7.0, Normal translocation
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*G)-3'), ...
Authors:Nakamura, T, Zhao, Y, Yang, W.
Deposit date:2012-03-27
Release date:2012-07-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:Watching DNA polymerase eta make a phosphodiester bond
Nature, 487, 2012
5UUO
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BU of 5uuo by Molmil
Crystal structure of SARO_2595 from Novosphingobium aromaticivorans
Descriptor: 1,2-ETHANEDIOL, GLUTATHIONE, Glutathione S-transferase-like protein, ...
Authors:Bingman, C.A, Kontur, W.S, Olmsted, C.N, Fox, B.G, Donohue, T.J.
Deposit date:2017-02-17
Release date:2018-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Novosphingobium aromaticivoransuses a Nu-class glutathioneS-transferase as a glutathione lyase in breaking the beta-aryl ether bond of lignin.
J. Biol. Chem., 293, 2018
4EFB
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BU of 4efb by Molmil
Crystal structure of DNA ligase
Descriptor: 4-amino-2-(cyclopentyloxy)-6-{[(1R,2S)-2-hydroxycyclopentyl]oxy}pyrimidine-5-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
Authors:Wei, Y, Wang, T, Charifson, P, Xu, W.
Deposit date:2012-03-29
Release date:2013-04-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of DNA ligase
To be Published
4NX2
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BU of 4nx2 by Molmil
Crystal structure of DCYRS complexed with DCY
Descriptor: 3,5-dichloro-L-tyrosine, Tyrosine--tRNA ligase
Authors:Wang, J, Gong, W, Li, J, Gao, F, Li, H.
Deposit date:2013-12-08
Release date:2014-09-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Significant expansion of fluorescent protein sensing ability through the genetic incorporation of superior photo-induced electron-transfer quenchers.
J.Am.Chem.Soc., 136, 2014

222415

数据于2024-07-10公开中

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