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PDB: 12920 results

5HSZ
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BU of 5hsz by Molmil
Structure of the K. pneumonia SlmA protein bound to the C-terminal tail of the cytoskeletal cell division protein FtsZ
Descriptor: C-terminal Tail of FtsZ, Nucleoid occlusion factor SlmA, SULFATE ION
Authors:Zeng, W, Schumacher, M.A.
Deposit date:2016-01-26
Release date:2016-04-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc.Natl.Acad.Sci.USA, 113, 2016
5HTY
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BU of 5hty by Molmil
Sugar kinases from Synechococcus elongatus PCC7942-D221A
Descriptor: Probable sugar kinase
Authors:Xie, Y, Li, M, Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.815 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
2ACH
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BU of 2ach by Molmil
CRYSTAL STRUCTURE OF CLEAVED HUMAN ALPHA1-ANTICHYMOTRYPSIN AT 2.7 ANGSTROMS RESOLUTION AND ITS COMPARISON WITH OTHER SERPINS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA 1-ANTICHYMOTRYPSIN, PHOSPHATE ION, ...
Authors:Baumann, U, Huber, R, Bode, W, Grosse, D, Lesjak, M, Laurell, C.B.
Deposit date:1993-04-26
Release date:1993-07-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of cleaved human alpha 1-antichymotrypsin at 2.7 A resolution and its comparison with other serpins.
J.Mol.Biol., 218, 1991
5VGM
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BU of 5vgm by Molmil
Crystal structure of dihydroorotase pyrC from Vibrio cholerae in complex with zinc at 1.95 A resolution.
Descriptor: ACETATE ION, CHLORIDE ION, Dihydroorotase, ...
Authors:Lipowska, J, Shabalin, I.G, Miks, C.D, Winsor, J, Cooper, D.R, Shuvalova, L, Kwon, K, Lewinski, K, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-04-11
Release date:2017-04-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pyrimidine biosynthesis in pathogens - Structures and analysis of dihydroorotases from Yersinia pestis and Vibrio cholerae.
Int.J.Biol.Macromol., 136, 2019
5HTR
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BU of 5htr by Molmil
Putative sugar kinases from Arabidopsis thaliana in apo form
Descriptor: Putative xylulose kinase
Authors:Xie, Y, Li, M, Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5HUX
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BU of 5hux by Molmil
Putative sugar kinases from Synechococcus elongatus PCC7942 in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Probable sugar kinase
Authors:Xie, Y, Li, M, Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
3F1J
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BU of 3f1j by Molmil
Crystal structure of the Borna disease virus matrix protein (BDV-M) reveals RNA binding properties
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Matrix protein, SULFATE ION
Authors:Neumann, P, Lieber, D, Meyer, S, Dautel, P, Kerth, A, Kraus, I, Garten, W, Stubbs, M.T.
Deposit date:2008-10-28
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of the Borna disease virus matrix protein (BDV-M) reveals ssRNA binding properties
Proc.Natl.Acad.Sci.USA, 106, 2009
5VF3
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BU of 5vf3 by Molmil
Bacteriophage T4 isometric capsid
Descriptor: Capsid vertex protein gp24, Highly immunogenic outer capsid protein, Major capsid protein, ...
Authors:Chen, Z, Sun, L, Zhang, Z, Fokine, A, Padilla-Sanchez, V, Hanein, D, Jiang, W, Rossmann, M.G, Rao, V.B.
Deposit date:2017-04-06
Release date:2017-09-13
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the bacteriophage T4 isometric head at 3.3- angstrom resolution and its relevance to the assembly of icosahedral viruses.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2H4G
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BU of 2h4g by Molmil
Crystal structure of PTP1B with monocyclic thiophene inhibitor
Descriptor: 4-BROMO-3-(CARBOXYMETHOXY)-5-(4-HYDROXYPHENYL)THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
Authors:Xu, W, Wan, Z.-K.
Deposit date:2006-05-24
Release date:2006-08-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Monocyclic thiophenes as protein tyrosine phosphatase 1B inhibitors: Capturing interactions with Asp48.
Bioorg.Med.Chem.Lett., 16, 2006
5HBO
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BU of 5hbo by Molmil
Native rhodanese domain of YgaP prepared without DDT is both S-nitrosylated and S-sulfhydrated
Descriptor: Inner membrane protein YgaP
Authors:Eichmann, C, Tzitzilonis, C, Nakamura, T, Kwiatkowski, W, Maslennikov, I, Choe, S, Lipton, S.A, Riek, R.
Deposit date:2016-01-01
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:S-Nitrosylation Induces Structural and Dynamical Changes in a Rhodanese Family Protein.
J.Mol.Biol., 428, 2016
2H4X
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BU of 2h4x by Molmil
Human bisphosphoglycerate mutase complex with 3-phosphoglycerate with crystal growth 90 days
Descriptor: 3-PHOSPHOGLYCERIC ACID, Bisphosphoglycerate mutase
Authors:Wang, Y, Gong, W.
Deposit date:2006-05-25
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Seeing the process of histidine phosphorylation in human bisphosphoglycerate mutase.
J.Biol.Chem., 281, 2006
5VNK
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BU of 5vnk by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal LL sorting motif
Descriptor: C-terminal LL, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
3F5K
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BU of 3f5k by Molmil
Semi-active E176Q mutant of rice BGlu1, a plant exoglucanase/beta-glucosidase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase, GLYCEROL, ...
Authors:Chuenchor, W, Ketudat Cairns, J.R, Pengthaisong, S, Robinson, R.C, Yuvaniyama, J, Chen, C.-J.
Deposit date:2008-11-03
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structural basis of oligosaccharide binding by rice BGlu1 beta-glucosidase
J.Struct.Biol., 173, 2011
5VNH
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BU of 5vnh by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal SV sorting motif
Descriptor: C-terminal SV motif, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-04-30
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
1POG
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BU of 1pog by Molmil
SOLUTION STRUCTURE OF THE OCT-1 POU-HOMEO DOMAIN DETERMINED BY NMR AND RESTRAINED MOLECULAR DYNAMICS
Descriptor: OCT-1 POU HOMEODOMAIN DNA-BINDING PROTEIN
Authors:Cox, M, Van Tilborg, P.J.A, De Laat, W, Boelens, R, Van Leeuwen, H.C, Van Der Vliet, P.C, Kaptein, R.
Deposit date:1994-10-12
Release date:1995-07-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the Oct-1 POU homeodomain determined by NMR and restrained molecular dynamics.
J.Biomol.NMR, 6, 1995
5VPK
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BU of 5vpk by Molmil
CRYSTAL STRUCTURE OF MITE ALLERGEN DER F 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Der f 1 variant, SULFATE ION
Authors:Chruszcz, M, Chapman, M.D, Vailes, L.D, Pomes, A, Minor, W.
Deposit date:2017-05-05
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures Of Mite Allergens Der F 1 And Der P 1 Reveal Differences In Surface-Exposed Residues That May Influence Antibody Binding
J.Mol.Biol., 386, 2009
2GLE
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BU of 2gle by Molmil
Solution structure of neurabin SAM domain
Descriptor: Neurabin-1
Authors:Ju, T, Hudak, J, Peti, W.
Deposit date:2006-04-04
Release date:2007-03-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural characterization of the neurabin SAM domain
TO BE PUBLISHED
2GLV
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BU of 2glv by Molmil
Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) mutant(Y100A) from Helicobacter pylori
Descriptor: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, CHLORIDE ION
Authors:Zhang, L, Liu, W, Shen, X, Jiang, H.
Deposit date:2006-04-05
Release date:2007-03-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for catalytic and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ).
J.Biol.Chem., 283, 2008
7YGG
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BU of 7ygg by Molmil
Crystal structure of human CD47 in complex with engineered SIRPa.D1(N80A)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Leukocyte surface antigen CD47, ...
Authors:Yu, J, Tian, W.
Deposit date:2022-07-11
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal Structure of Human CD47 in Complex with Engineered SIRP alpha.D1(N80A).
Molecules, 27, 2022
2GQ6
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BU of 2gq6 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
1PPR
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BU of 1ppr by Molmil
PERIDININ-CHLOROPHYLL-PROTEIN OF AMPHIDINIUM CARTERAE
Descriptor: CHLOROPHYLL A, DIGALACTOSYL DIACYL GLYCEROL (DGDG), PERIDININ, ...
Authors:Hofmann, E, Welte, W, Diederichs, K.
Deposit date:1996-03-06
Release date:1997-08-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of light harvesting by carotenoids: peridinin-chlorophyll-protein from Amphidinium carterae.
Science, 272, 1996
3DMI
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BU of 3dmi by Molmil
Crystallization and Structural Analysis of Cytochrome c6 from the Diatom Phaeodactylum tricornutum at 1.5 A resolution
Descriptor: HEME C, MAGNESIUM ION, cytochrome c6
Authors:Akazaki, H, Kawai, F, Hosokawa, M, Hama, T, Hirano, T, Lim, B.-K, Sakurai, N, Hakamata, W, Park, S.-Y, Nishio, T, Oku, T.
Deposit date:2008-07-01
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallization and structural analysis of cytochrome c(6) from the diatom Phaeodactylum tricornutum at 1.5 A resolution.
Biosci.Biotechnol.Biochem., 73, 2009
4DQP
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BU of 4dqp by Molmil
Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and ddCTP (paired with dG of template)
Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*C*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'), ...
Authors:Wang, W, Beese, L.S.
Deposit date:2012-02-16
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides.
J.Biol.Chem., 287, 2012
5VNN
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BU of 5vnn by Molmil
Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (50mM soaking)
Descriptor: 4-PHENYL-BUTANOIC ACID, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2017-05-01
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
5VEP
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BU of 5vep by Molmil
MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2F
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018

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