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PDB: 12920 results

2IIP
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BU of 2iip by Molmil
Human Nicotinamide N-methyltransferase
Descriptor: Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Bernstein, G, Min, J, Wu, H, Tempel, W, Zeng, H, Loppnau, P, Avvakumov, G.V, Wasney, G, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-09-28
Release date:2006-10-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Crystal Structure of Human Nicotinamide N-methyltransferase in complex with SAH
To be Published
3C4J
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BU of 3c4j by Molmil
ABC protein ArtP in complex with ATP-gamma-S
Descriptor: Amino acid ABC transporter (ArtP), MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Thaben, P.F, Eckey, V, Scheffel, F, Saenger, W, Schneider, E, Vahedi-Faridi, A.
Deposit date:2008-01-30
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal Structures of the ATP-binding cassette (ABC) Protein ArtP from Geobacillus stearothermophilus in complexes with nucleotides and nucleotide analogs reveal an intermediate semiclosed dimer in the post hydrolyses state and an asymmetry in the dimerisation region
To be Published
5UYY
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BU of 5uyy by Molmil
Crystal structure of prephenate dehydrogenase tyrA from Bacillus anthracis in complex with L-tyrosine
Descriptor: Prephenate dehydrogenase, TYROSINE
Authors:Shabalin, I.G, Hou, J, Cymborowski, M.T, Kwon, K, Christendat, D, Gritsunov, A.O, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-24
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and biochemical analysis of Bacillus anthracis prephenate dehydrogenase reveals an unusual mode of inhibition by tyrosine via the ACT domain.
Febs J., 287, 2020
3QGN
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BU of 3qgn by Molmil
The allosteric E*-E equilibrium is a key property of the trypsin fold
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, IODIDE ION, ...
Authors:Niu, W, Gohara, D, Chen, Z, Di Cera, E.
Deposit date:2011-01-24
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic and kinetic evidence of allostery in a trypsin-like protease.
Biochemistry, 50, 2011
3C5C
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BU of 3c5c by Molmil
Crystal structure of human Ras-like, family 12 protein in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RAS-like protein 12, ...
Authors:Shen, L, Tong, Y, Tempel, W, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-01-31
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of human Ras-like, family 12 protein in complex with GDP.
To be Published
3C6R
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BU of 3c6r by Molmil
Low pH Immature Dengue Virus
Descriptor: Envelope protein, Peptide pr
Authors:Yu, I, Zhang, W, Holdway, H.A, Li, L, Kostyuchenko, V.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
Deposit date:2008-02-05
Release date:2008-04-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Structure of the immature dengue virus at low pH primes proteolytic maturation
Science, 319, 2008
5VBD
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BU of 5vbd by Molmil
Crystal structure of a putative UBL domain of USP9X
Descriptor: UNKNOWN ATOM OR ION, USP9X
Authors:Dong, A, Chern, Y, Hou, F, Li, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2017-03-29
Release date:2017-04-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a putative UBL domain of USP9X
to be published
5FT2
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BU of 5ft2 by Molmil
Sub-tomogram averaging of Lassa virus glycoprotein spike from virus- like particles at pH 5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PRE-GLYCOPROTEIN POLYPROTEIN GP COMPLEX
Authors:Li, S, Zhaoyang, S, Pryce, R, Parsy, M.L, Fehling, S.K, Schlie, K, Siebert, C.A, Garten, W, Bowden, T.A, Strecker, T, Huiskonen, J.T.
Deposit date:2016-01-09
Release date:2016-03-02
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (16.4 Å)
Cite:Acidic Ph-Induced Conformations and Lamp1 Binding of the Lassa Virus Glycoprotein Spike.
Plos Pathog., 12, 2016
5V0L
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BU of 5v0l by Molmil
Crystal structure of the AHR-ARNT heterodimer in complex with the DRE
Descriptor: Aryl hydrocarbon receptor, Aryl hydrocarbon receptor nuclear translocator, CITRIC ACID, ...
Authors:Seok, S.-H, Lee, W, Jiang, L, Bradfield, C.A, Xing, Y.
Deposit date:2017-02-28
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural hierarchy controlling dimerization and target DNA recognition in the AHR transcriptional complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5V0V
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BU of 5v0v by Molmil
Crystal structure of Equine Serum Albumin complex with etodolac
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, Serum albumin, ...
Authors:Czub, M.P, Shabalin, I.G, Handing, K.B, Venkataramany, B.S, Steen, E.H, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-28
Release date:2017-03-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Albumin-Based Transport of Nonsteroidal Anti-Inflammatory Drugs in Mammalian Blood Plasma.
J.Med.Chem., 2020
5VCI
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BU of 5vci by Molmil
RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue
Descriptor: 5'-O-[(S)-hydroxy(4-methyl-1H-imidazol-5-yl)phosphoryl]guanosine, RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*CP*CP*GP*AP*AP*AP*GP*G)-3'), RNA (5'-R(P*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2017-03-31
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Rationale for the Enhanced Catalysis of Nonenzymatic RNA Primer Extension by a Downstream Oligonucleotide.
J. Am. Chem. Soc., 140, 2018
2ERV
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BU of 2erv by Molmil
Crystal structure of the outer membrane enzyme PagL
Descriptor: CALCIUM ION, PENTAETHYLENE GLYCOL MONODECYL ETHER, hypothetical protein Paer03002360
Authors:Rutten, L, Geurtsen, J, Lambert, W, Smolenaers, J.J, Bonvin, A.M, van der Ley, P, Egmond, M.R, Gros, P, Tommassen, J.
Deposit date:2005-10-25
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and catalytic mechanism of the LPS 3-O-deacylase PagL from Pseudomonas aeruginosa.
Proc.Natl.Acad.Sci.USA, 103, 2006
5VPH
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BU of 5vph by Molmil
CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Der p 1 allergen, ...
Authors:Chruszcz, M, Vailes, L.D, Chapman, M.D, Pomes, A, Minor, W.
Deposit date:2017-05-05
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Determinants For Antibody Binding On Group 1 House Dust Mite Allergens.
J.Biol.Chem., 287, 2012
5FET
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BU of 5fet by Molmil
Crystal Structure of PVX_084705 in presence of Compound 2
Descriptor: 4-[7-[(dimethylamino)methyl]-2-(4-fluorophenyl)imidazo[1,2-a]pyridin-3-yl]pyrimidin-2-amine, cGMP-dependent protein kinase, putative
Authors:Wernimont, A.K, Tempel, W, Walker, J.R, He, H, Seitova, A, Hills, T, Neculai, A.M, Baker, D.A, Flueck, C, Kettleborough, C.A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Hutchinson, A, El Bakkouri, M, Structural Genomics Consortium (SGC)
Deposit date:2015-12-17
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Crystal Structure of PVX_084705 in presence of Compound 2
To be published
2F0X
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BU of 2f0x by Molmil
Crystal structure and function of human thioesterase superfamily member 2(THEM2)
Descriptor: SULFATE ION, Thioesterase superfamily member 2
Authors:Cheng, Z, Song, F, Shan, X, Wang, Y, Wei, Z, Gong, W.
Deposit date:2005-11-14
Release date:2006-10-10
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human thioesterase superfamily member 2
Biochem.Biophys.Res.Commun., 349, 2006
5VCN
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BU of 5vcn by Molmil
THE CRYSTAL STRUCTURE OF DER P 1 ALLERGEN COMPLEXED WITH FAB FRAGMENT OF MAB 5H8
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Osinski, T, Majorek, K.A, Pomes, A, Offermann, L.R, Osinski, S, Glesner, J, Vailes, L.D, Chapman, M.D, Minor, W, Chruszcz, M.
Deposit date:2017-03-31
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Analysis of Der p 1-Antibody Complexes and Comparison with Complexes of Proteins or Peptides with Monoclonal Antibodies.
J. Immunol., 195, 2015
3BY1
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BU of 3by1 by Molmil
Unliganded Norvalk Virus P domain
Descriptor: 58 kd capsid protein
Authors:Hegde, R, Bu, W.
Deposit date:2008-01-15
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
5VER
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BU of 5ver by Molmil
MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2Z
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2017-11-29
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5FHF
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BU of 5fhf by Molmil
Crystal structure of Bacteroides sp Pif1 in complex with ADP-AlF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TETRAFLUOROALUMINATE ION, Uncharacterized protein
Authors:Zhou, X, Ren, W, Bharath, S.R, Song, H.
Deposit date:2015-12-22
Release date:2016-03-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Insights into the Unwinding Mechanism of Bacteroides sp Pif1
Cell Rep, 14, 2016
2F7M
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BU of 2f7m by Molmil
Crystal Structure of Unliganded Human FPPS
Descriptor: Farnesyl Diphosphate Synthase, PHOSPHATE ION
Authors:Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
Deposit date:2005-12-01
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
2F90
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BU of 2f90 by Molmil
Crystal structure of bisphosphoglycerate mutase in complex with 3-phosphoglycerate and AlF4-
Descriptor: 3-PHOSPHOGLYCERIC ACID, Bisphosphoglycerate mutase, TETRAFLUOROALUMINATE ION
Authors:Wang, Y, Liu, L, Wei, Z, Gong, W.
Deposit date:2005-12-05
Release date:2006-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Seeing the process of histidine phosphorylation in human bisphosphoglycerate mutase
J.Biol.Chem., 281, 2006
5FKI
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BU of 5fki by Molmil
Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data
Descriptor: CHLORIDE ION, UL31, UL34 protein, ...
Authors:Hagen, C, Dent, K.C, Zeev Ben Mordehai, T, Vasishtan, D, Antonin, W, Mettenleiter, T.C, Gruenewald, K.
Deposit date:2015-10-16
Release date:2016-03-16
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights Into Inner Nuclear Membrane Remodelling
Cell Rep., 13, 2015
5FTD
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BU of 5ftd by Molmil
Crystal structure of Pif1 helicase from Bacteroides apo form
Descriptor: PHOSPHATE ION, TPR DOMAIN PROTEIN
Authors:Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
Deposit date:2016-01-12
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
2D8L
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BU of 2d8l by Molmil
Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, Putative glycosyl hydrolase yteR
Authors:Itoh, T, Ochiai, A, Mikami, B, Hashimoto, W, Murata, K.
Deposit date:2005-12-06
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A novel glycoside hydrolase family 105: the structure of family 105 unsaturated rhamnogalacturonyl hydrolase complexed with a disaccharide in comparison with family 88 enzyme complexed with the disaccharide
J.Mol.Biol., 360, 2006
2F96
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BU of 2f96 by Molmil
2.1 A crystal structure of Pseudomonas aeruginosa rnase T (Ribonuclease T)
Descriptor: MAGNESIUM ION, Ribonuclease T
Authors:Zheng, H, Chruszcz, M, Cymborowski, M, Wang, Y, Gorodichtchenskaia, E, Skarina, T, Guthrie, J, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-05
Release date:2006-02-14
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of RNase T, an Exoribonuclease Involved in tRNA Maturation and End Turnover.
Structure, 15, 2007

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