Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12920 件

3FZV
DownloadVisualize
BU of 3fzv by Molmil
Crystal structure of PA01 protein, putative LysR family transcriptional regulator from Pseudomonas aeruginosa
分子名称: Probable transcriptional regulator, SULFATE ION
著者Knapik, A.A, Tkaczuk, K.L, Chruszcz, M, Wang, S, Zimmerman, M.D, Cymborowski, M, Skarina, T, Kagan, O, Savchenko, A, Edwards, A.M, Joachimiak, A, Bujnicki, J.M, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2009-01-26
公開日2009-03-10
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Crystal structure of PA01 protein, putative LysR family transcriptional regulator from Pseudomonas aeruginosa
To be Published
4WCZ
DownloadVisualize
BU of 4wcz by Molmil
Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
分子名称: Enoyl-CoA hydratase/isomerase
著者Tkaczuk, K.L, Cooper, D.R, Chapman, H.C, Niedzialkowska, E, Cymborowski, M.T, Hillerich, B.S, Stead, M, Ahmed, M, Hammonds, J, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-09-05
公開日2014-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
to be published
4V4A
DownloadVisualize
BU of 4v4a by Molmil
Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S ribosomal protein S10, ...
著者Vila-Sanjurjo, A, Ridgeway, W.K, Seymaner, V, Zhang, W, Santoso, S, Yu, K, Cate, J.H.D.
登録日2003-06-13
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (9.5 Å)
主引用文献X-ray crystal structures of the WT and a hyper-accurate ribosome from Escherichia coli
Proc.Natl.Acad.Sci.USA, 100, 2003
4V55
DownloadVisualize
BU of 4v55 by Molmil
Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).
分子名称: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, 23S rRNA, ...
著者Borovinskaya, M.A, Pai, R.D, Zhang, W, Schuwirth, B.-S, Holton, J.M, Hirokawa, G, Kaji, H, Kaji, A, Cate, J.H.D.
登録日2007-06-17
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.
Nat.Struct.Mol.Biol., 14, 2007
3G2G
DownloadVisualize
BU of 3g2g by Molmil
S437Y Mutant of human muscle pyruvate kinase, isoform M2
分子名称: Pyruvate kinase isozymes M1/M2, SULFATE ION, UNKNOWN ATOM OR ION
著者Hong, B, Dimov, S, Allali-Hassani, A, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, c, Weigelt, J, Bochkarev, A, Vedadi, M, Park, H, Structural Genomics Consortium (SGC)
登録日2009-01-31
公開日2009-03-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献S437Y Mutant of human muscle pyruvate kinase, isoform M2
To be Published
4V94
DownloadVisualize
BU of 4v94 by Molmil
Molecular architecture of the eukaryotic chaperonin TRiC/CCT derived by a combination of chemical crosslinking and mass-spectrometry, XL-MS
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Leitner, A, Joachimiak, L.A, Bracher, A, Walzthoeni, T, Chen, B, Monkemeyer, L, Pechmann, S, Holmes, S, Cong, Y, Ma, B, Ludtke, S, Chiu, W, Hartl, F.U, Aebersold, R, Frydman, J.
登録日2012-01-11
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献The Molecular Architecture of the Eukaryotic Chaperonin TRiC/CCT.
Structure, 20, 2012
2EO0
DownloadVisualize
BU of 2eo0 by Molmil
Crystal Structure of Holliday Junction Resolvase ST1444
分子名称: Hypothetical protein ST1444
著者Sarai, N, Kagawa, W, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-28
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Holliday Junction Resolvase ST1444
To be published
4V6E
DownloadVisualize
BU of 4v6e by Molmil
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Zhang, W, Dunkle, J.A, Cate, J.H.D.
登録日2009-06-28
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (3.712 Å)
主引用文献Structures of the ribosome in intermediate States of ratcheting.
Science, 325, 2009
4V0T
DownloadVisualize
BU of 4v0t by Molmil
Monomeric pseudorabies virus protease pUL26N at 2.1 A resolution
分子名称: UL26
著者Zuehlsdorf, M, Werten, S, Palm, G.J, Hinrichs, W.
登録日2014-09-18
公開日2015-07-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Dimerization-Induced Allosteric Changes of the Oxyanion-Hole Loop Activate the Pseudorabies Virus Assemblin Pul26N, a Herpesvirus Serine Protease
Plos Pathog., 11, 2015
8BFR
DownloadVisualize
BU of 8bfr by Molmil
The E. coli TrpD2 protein YbiB at 1.3 A resolution
分子名称: GLYCEROL, Protein YbiB
著者Deckers, B, Galicia, C, Versees, W.
登録日2022-10-26
公開日2023-02-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献YbiB: a novel interactor of the GTPase ObgE.
Nucleic Acids Res., 51, 2023
4W4R
DownloadVisualize
BU of 4w4r by Molmil
Crystal structure of ent-kaurene synthase BJKS from bradyrhizobium japonicum
分子名称: Uncharacterized protein blr2150
著者Liu, W, Zheng, Y, Huang, C.H, Ko, T.P, Guo, R.T.
登録日2014-08-15
公開日2015-01-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum.
Sci Rep, 4, 2014
2E5N
DownloadVisualize
BU of 2e5n by Molmil
Solution structure of the ELL_N2 domain of target of RNA polymerase II elongation factor ELL2
分子名称: RNA polymerase II elongation factor ELL2
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-22
公開日2007-06-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the ELL_N2 domain of target of RNA polymerase II elongation factor ELL2
To be Published
8BFT
DownloadVisualize
BU of 8bft by Molmil
The E. coli TrpD2 protein YbiB in complex with a C-terminal peptide from ObgE
分子名称: DI(HYDROXYETHYL)ETHER, GTPase ObgE/CgtA, Protein YbiB
著者Deckers, B, Galicia, C, Versees, W.
登録日2022-10-26
公開日2023-02-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献YbiB: a novel interactor of the GTPase ObgE.
Nucleic Acids Res., 51, 2023
4WBT
DownloadVisualize
BU of 4wbt by Molmil
Crystal structure of histidinol-phosphate aminotransferase from Sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Shabalin, I.G, Bacal, P, Kowalska, A.K, Cooper, D.R, Stead, M, Hammonds, J, Ahmed, M, Hillerich, B.S, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-09-03
公開日2014-09-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of histidinol-phosphate aminotransferase from Sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
to be published
6LTU
DownloadVisualize
BU of 6ltu by Molmil
Crystal structure of Cas12i2 ternary complex with double Mg2+ bound in catalytic pocket
分子名称: 1,2-ETHANEDIOL, Cas12i2, DNA (35-MER), ...
著者Huang, X, Sun, W, Cheng, Z, Chen, M, Li, X, Wang, J, Sheng, G, Gong, W, Wang, Y.
登録日2020-01-23
公開日2020-10-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2.
Nat Commun, 11, 2020
6LUM
DownloadVisualize
BU of 6lum by Molmil
Structure of Mycobacterium smegmatis succinate dehydrogenase 2
分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ...
著者Gao, Y, Gong, H, Zhou, X, Xiao, Y, Wang, W, Ji, W, Wang, Q, Rao, Z.
登録日2020-01-29
公開日2020-05-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Cryo-EM structure of trimeric Mycobacterium smegmatis succinate dehydrogenase with a membrane-anchor SdhF.
Nat Commun, 11, 2020
3G1N
DownloadVisualize
BU of 3g1n by Molmil
Catalytic domain of the human E3 ubiquitin-protein ligase HUWE1
分子名称: E3 ubiquitin-protein ligase HUWE1, SODIUM ION
著者Walker, J.R, Qiu, L, Li, Y, Davis, T, Tempel, W, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2009-01-30
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Hect Domain of Human HUWE1/MULE
To be Published
3FWW
DownloadVisualize
BU of 3fww by Molmil
The crystal structure of the bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase from Yersinia pestis CO92
分子名称: Bifunctional protein glmU
著者Zhang, R, Gu, M, Stam, J, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-01-19
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of the bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase from Yersinia pestis CO92
To be Published
4WD3
DownloadVisualize
BU of 4wd3 by Molmil
Crystal structure of an L-amino acid ligase RizA
分子名称: L-amino acid ligase
著者Kagawa, W, Arai, T, Kino, K, Kurumizaka, H.
登録日2014-09-06
公開日2015-09-09
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of RizA, an L-amino-acid ligase from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 71, 2015
8BJ4
DownloadVisualize
BU of 8bj4 by Molmil
Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in apo form
分子名称: 1,2-ETHANEDIOL, SODIUM ION, SULFATE ION, ...
著者Rutkiewicz, M, Witek, W, Ruszkowski, M.
登録日2022-11-03
公開日2023-03-22
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Insights into the substrate specificity, structure, and dynamics of plant histidinol-phosphate aminotransferase (HISN6).
Plant Physiol Biochem., 196, 2023
3FT1
DownloadVisualize
BU of 3ft1 by Molmil
Crystal structure of pollen allergen Phl p 3
分子名称: CHLORIDE ION, Phl p 3 allergen
著者Keller, W, Devanaboyina, S.C.
登録日2009-01-12
公開日2010-01-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献High-resolution crystal structure and IgE recognition of the major grass pollen allergen Phl p 3.
Allergy, 69, 2014
3FUG
DownloadVisualize
BU of 3fug by Molmil
Crystal Structure of the Retinoid X Receptor Ligand Binding Domain Bound to the Synthetic Agonist 3-[4-Hydroxy-3-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)-phenyl]acrylic Acid
分子名称: (2E)-3-[4-hydroxy-3-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)phenyl]prop-2-enoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
著者Bourguet, W.
登録日2009-01-14
公開日2009-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Modulating retinoid X receptor with a series of (E)-3-[4-hydroxy-3-(3-alkoxy-5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)phenyl]acrylic acids and their 4-alkoxy isomers.
J.Med.Chem., 52, 2009
3FX2
DownloadVisualize
BU of 3fx2 by Molmil
COMPARISON OF THE CRYSTAL STRUCTURES OF A FLAVODOXIN IN ITS THREE OXIDATION STATES AT CRYOGENIC TEMPERATURES
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者Watt, W, Watenpaugh, K.D.
登録日1991-10-17
公開日1993-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Comparison of the crystal structures of a flavodoxin in its three oxidation states at cryogenic temperatures.
J.Mol.Biol., 218, 1991
2E24
DownloadVisualize
BU of 2e24 by Molmil
crystal structure of a mutant (R612A) of xanthan lyase
分子名称: DI(HYDROXYETHYL)ETHER, Xanthan lyase
著者Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K.
登録日2006-11-07
公開日2007-01-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Structural Factor Responsible for Substrate Recognition by Bacillus sp. GL1 Xanthan Lyase that Acts Specifically on Pyruvated Side Chains of Xanthan
Biochemistry, 46, 2007
3G6Z
DownloadVisualize
BU of 3g6z by Molmil
Design and Preparation of Potent, Non-Peptidic, Bioavailable Renin Inhibitors
分子名称: (1R,5S)-N-cyclopropyl-7-{4-[2-(2,6-dichloro-4-methylphenoxy)ethoxy]phenyl}-N-(2,3-dimethylbenzyl)-3,9-diazabicyclo[3.3.1]non-6-ene-6-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin
著者Bezencon, O, Bur, D, Prade, L, Weller, T, Boss, C, Fischli, W.
登録日2009-02-09
公開日2009-06-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design and Preparation of Potent, Nonpeptidic, Bioavailable Renin Inhibitors
J.Med.Chem., 52, 2009

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon