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PDB: 12920 件

3J0B
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cryo-EM reconstruction of West Nile virus
分子名称: envelope glycoprotein E
著者Zhang, W, Kaufmann, B, Chipman, P.R, Kuhn, R.J, Rossmann, M.G.
登録日2011-06-15
公開日2012-12-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (10.3 Å)
主引用文献Membrane curvature in flaviviruses.
J.Struct.Biol., 183, 2013
2VWL
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Aminopyrrolidine Factor Xa inhibitor
分子名称: 5-CHLORO-THIOPHENE-2-CARBOXYLIC ACID ((3R,5S)-1-{[2-FLUORO-4-(2-OXO-PYRIDIN-1-YL)-PHENYLCARBAMOYL]-METHYL}-5-HYDROXYMETHYL-PYRROLIDIN-3-YL)-AMIDE, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ...
著者Groebke-Zbinden, K, Banner, D.W, Benz, J.M, Blasco, F, Decoret, G, Himber, J, Kuhn, B, Panday, N, Ricklin, F, Risch, P, Schlatter, D, Stahl, M, Unger, R, Haap, W.
登録日2008-06-26
公開日2009-07-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design of Novel Aminopyrrolidine Factor Xa Inhibitors from a Screening Hit.
Eur.J.Med.Chem., 44, 2009
7TZL
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The DH dehydratase domain of AlnB
分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase
著者Swain, K, Blackson, W, Wang, B, Zhao, H, Nannenga, B.L.
登録日2022-02-16
公開日2023-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The programming of alpha,beta-polyene biosynthesis by a bacterial iterative type I polyketide synthase
To Be Published
3IXV
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Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map
分子名称: Hemocyanin AA6 chain
著者Cong, Y, Zhang, Q, Woolford, D, Schweikardt, T, Khant, H, Ludtke, S, Chiu, W, Decker, H.
登録日2009-02-13
公開日2009-06-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Structural Mechanism of SDS-Induced Enzyme Activity of Scorpion Hemocyanin Revealed by Electron Cryomicroscopy.
Structure, 17, 2009
3IZI
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Mm-cpn rls with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-29
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IXW
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Scorpion Hemocyanin activated state pseudo atomic model built based on cryo-EM density map
分子名称: Hemocyanin AA6 chain
著者Cong, Y, Zhang, Q, Woolford, D, Schweikardt, T, Khant, H, Ludtke, S, Chiu, W, Decker, H.
登録日2009-02-13
公開日2009-06-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural Mechanism of SDS-Induced Enzyme Activity of Scorpion Hemocyanin Revealed by Electron Cryomicroscopy.
Structure, 17, 2009
1YHN
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Structure basis of RILP recruitment by Rab7
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rab interacting lysosomal protein, ...
著者Wu, M, Wang, T, Hong, W, Song, H.
登録日2005-01-10
公開日2005-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for recruitment of RILP by small GTPase Rab7.
Embo J., 24, 2005
3IZH
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Mm-cpn D386A with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-29
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
2WD0
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CRYSTAL STRUCTURE OF NONSYNDROMIC DEAFNESS (DFNB12) ASSOCIATED MUTANT D124G OF MOUSE CADHERIN-23 EC1-2
分子名称: CADHERIN-23, CALCIUM ION, CHLORIDE ION, ...
著者Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
登録日2009-03-18
公開日2010-04-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Structural Determinants of Cadherin-23 Function in Hearing and Deafness.
Neuron, 66, 2010
3IYG
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Ca model of bovine TRiC/CCT derived from a 4.0 Angstrom cryo-EM map
分子名称: T-complex protein 1 subunit, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
著者Cong, Y, Baker, M.L, Ludtke, S.J, Frydman, J, Chiu, W.
登録日2009-11-28
公開日2010-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.
Proc.Natl.Acad.Sci.USA, 107, 2010
4YY1
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The structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013) in complex with human receptor analog 6'SLNLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HA1, ...
著者Wang, F, Qi, J, Bi, Y, Zhang, W, Wang, M, Wang, M, Liu, J, Yan, J, Shi, Y, Gao, G.F.
登録日2015-03-23
公開日2016-03-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013)
To Be Published
7TXT
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Structure of human serotonin transporter bound to small molecule '8090 in lipid nanodisc and NaCl
分子名称: 1-[4-(4-fluorophenyl)-1,3-thiazol-2-yl]piperazine, 15B8 Fab heavy chain, 15B8 Fab light chain, ...
著者Singh, I, Seth, A, Billesboelle, C.B, Braz, J, Rodriguiz, R.M, Roy, K, Bekele, B, Craik, V, Huang, X.P, Boytsov, D, Lak, P, O'Donnell, H, Sandtner, W, Roth, B.L, Basbaum, A.I, Wetsel, W.C, Manglik, A, Shoichet, B.K, Rudnick, G.
登録日2022-02-09
公開日2023-03-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure-based discovery of conformationally selective inhibitors of the serotonin transporter.
Cell, 186, 2023
3IZM
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Mm-cpn wildtype with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-30
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3J0C
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Models of E1, E2 and CP of Venezuelan Equine Encephalitis Virus TC-83 strain restrained by a near atomic resolution cryo-EM map
分子名称: Capsid protein, E1 envelope glycoprotein, E2 envelope glycoprotein
著者Zhang, R, Hryc, C.F, Cong, Y, Liu, X, Jakana, J, Gorchakov, R, Baker, M.L, Weaver, S.C, Chiu, W.
登録日2011-06-22
公開日2011-08-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献4.4 A cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.
Embo J., 30, 2011
4Z0O
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CW-type zinc finger of ZCWPW2 with F78D mutation
分子名称: SODIUM ION, UNKNOWN ATOM OR ION, ZINC ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献CW-type zinc finger of ZCWPW2 with F78D mutation
To be Published
3IYF
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Atomic Model of the Lidless Mm-cpn in the Open State
分子名称: Chaperonin
著者Zhang, J, Baker, M.L, Schroeder, G, Douglas, N.R, Reissmann, S, Jakana, J, Dougherty, M, Fu, C.J, Levitt, M, Ludtke, S.J, Frydman, J, Chiu, W.
登録日2009-10-23
公開日2010-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Mechanism of folding chamber closure in a group II chaperonin
Nature, 463, 2010
4Z0R
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Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
分子名称: 1,2-ETHANEDIOL, Histone H3.1, SULFATE ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
To be Published
3IZL
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Mm-cpn rls deltalid with ATP and AlFx
分子名称: Mm-cpn rls deltalid
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-29
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZN
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Mm-cpn deltalid with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-30
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
2VVV
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Aminopyrrolidine-related triazole Factor Xa inhibitor
分子名称: 5-chloro-N-[1-(2-{[2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl]amino}-2-oxoethyl)-1H-1,2,4-triazol-3-yl]thiophene-2-carboxamide, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ...
著者Groebke-Zbinden, K, Banner, D.W, Benz, J.M, Blasco, F, Decoret, G, Himber, J, Kuhn, B, Panday, N, Ricklin, F, Risch, P, Schlatter, D, Stahl, M, Unger, R, Haap, W.
登録日2008-06-12
公開日2009-07-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Design of Novel Aminopyrrolidine Factor Xa Inhibitors from a Screening Hit.
Eur.J.Med.Chem., 44, 2009
3J0F
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Sindbis virion
分子名称: Capsid protein, E1 envelope glycoprotein, E2 envelope glycoprotein
著者Tang, J, Jose, J, Zhang, W, Chipman, P, Kuhn, R.J, Baker, T.S.
登録日2011-07-08
公開日2011-10-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Molecular Links between the E2 Envelope Glycoprotein and Nucleocapsid Core in Sindbis Virus.
J.Mol.Biol., 414, 2011
3IZK
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Mm-cpn rls deltalid with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-29
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3IZP
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Conformation of EF-G during translocation
分子名称: Elongation factor G
著者Li, W, Trabuco, L.G, Schulten, K, Frank, J.
登録日2010-11-15
公開日2011-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY
主引用文献Molecular dynamics of EF-G during translocation.
Proteins, 79, 2011
4Z5T
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The nucleosome containing human H3.5
分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Urahama, T, Harada, A, Maehara, K, Horikoshi, N, Sato, K, Sato, Y, Shiraishi, K, Sugino, N, Osakabe, A, Tachiwana, H, Kagawa, W, Kimura, H, Ohkawa, Y, Kurumizaka, H.
登録日2015-04-03
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Histone H3.5 forms an unstable nucleosome and accumulates around transcription start sites in human testis.
Epigenetics Chromatin, 9, 2016
1YRQ
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Structure of the ready oxidized form of [NiFe]-hydrogenase
分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Volbeda, A, Martin, L, Cavazza, C, Matho, M, Faber, B.W, Roseboom, W, Albracht, S.P, Garcin, E, Rousset, M, Fontecilla-Camps, J.C.
登録日2005-02-04
公開日2005-04-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural differences between the ready and unready oxidized states of [NiFe] hydrogenases.
J.Biol.Inorg.Chem., 10, 2005

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