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PDB: 12920 件

6PKJ
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MicroED structure of proteinase K from an uncoated, single lamella at 2.17A resolution (#2)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.176 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKO
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MicroED structure of proteinase K from a platinum coated, unpolished, single lamella at 2.07A resolution (#12)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.07 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
3DR0
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Structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002
分子名称: Cytochrome c6, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Bialek, W, Krzywda, S, Jaskolski, M, Szczepaniak, A.
登録日2008-07-10
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Atomic-resolution structure of reduced cyanobacterial cytochrome c6 with an unusual sequence insertion
Febs J., 276, 2009
6VIZ
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BRD4_Bromodomain1 complex with pyrrolopyridone compound 27
分子名称: 4-[2-(2,6-dimethylphenoxy)-5-(ethylsulfonyl)phenyl]-N-ethyl-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide, Bromodomain-containing protein 4
著者Longenecker, K.L, Park, C.H, Qiu, W.
登録日2020-01-14
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.391 Å)
主引用文献Discovery ofN-Ethyl-4-[2-(4-fluoro-2,6-dimethyl-phenoxy)-5-(1-hydroxy-1-methyl-ethyl)phenyl]-6-methyl-7-oxo-1H-pyrrolo[2,3-c]pyridine-2-carboxamide (ABBV-744), a BET Bromodomain Inhibitor with Selectivity for the Second Bromodomain.
J.Med.Chem., 63, 2020
4FNV
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Crystal Structure of Heparinase III
分子名称: Heparinase III protein, heparitin sulfate lyase
著者Dong, W, Ye, S.
登録日2012-06-20
公開日2012-11-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis of heparan sulfate-specific degradation by heparinase III.
Protein Cell, 3, 2012
6PKR
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MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.79A resolution (#13)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.79 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKK
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MicroED structure of proteinase K from an uncoated, single lamella at 2.18A resolution (#5)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.176 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKP
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MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.91A resolution (#10)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.91 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6VRO
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The structure of the PP2A B56 subunit AIM1 complex
分子名称: Beta/gamma crystallin domain-containing protein 1, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform
著者Wang, X, Page, R, Peti, W.
登録日2020-02-08
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A dynamic charge-charge interaction modulates PP2A:B56 substrate recruitment.
Elife, 9, 2020
6VPS
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Cryo-EM structure of the amyloid core of Drosophila Orb2 isolated from head
分子名称: Translational regulator orb2
著者Hervas, R, Rau, M.J, Park, Y, Zhang, W, Murzin, A.G, Fitzpatrick, J.A.J, Scheres, S.H.W, Si, K.
登録日2020-02-04
公開日2020-03-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Cryo-EM structure of a neuronal functional amyloid implicated in memory persistence in Drosophila
Science, 367, 2020
6PQ0
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LCP-embedded Proteinase K treated with MPD
分子名称: CALCIUM ION, Proteinase K
著者Bu, G, Zhu, L, Jing, L, Shi, D, Gonen, T, Liu, W, Nannenga, B.L.
登録日2019-07-08
公開日2020-08-05
最終更新日2023-10-11
実験手法ELECTRON CRYSTALLOGRAPHY (2 Å)
主引用文献Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.
Structure, 28, 2020
6VQV
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Type I-F CRISPR-Csy complex with its inhibitor AcrF9
分子名称: AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
登録日2020-02-06
公開日2020-03-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6POM
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Cryo-EM structure of the full-length Bacillus subtilis glyQS T-box riboswitch in complex with tRNA-Gly
分子名称: T-box GlyQS leader (155-MER), tRNAGly (75-MER)
著者Li, S, Su, Z, Zhang, J, Chiu, W.
登録日2019-07-04
公開日2019-11-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions.
Nat.Struct.Mol.Biol., 26, 2019
6W2D
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BU of 6w2d by Molmil
Structures of Capsid and Capsid-Associated Tegument Complex inside the Epstein-Barr Virus
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Liu, W, Cui, Y.X, Wang, C.Y, Li, Z.H, Gong, D.Y, Dai, X.H, Bi, G.Q, Sun, R, Zhou, Z.H.
登録日2020-03-05
公開日2020-07-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structures of capsid and capsid-associated tegument complex inside the Epstein-Barr virus.
Nat Microbiol, 5, 2020
6PQ4
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LCP-embedded Proteinase K treated with lipase
分子名称: CALCIUM ION, NITRATE ION, Proteinase K
著者Bu, G, Zhu, L, Jing, L, Shi, D, Gonen, T, Liu, W, Nannenga, B.L.
登録日2019-07-08
公開日2020-08-05
最終更新日2023-10-11
実験手法ELECTRON CRYSTALLOGRAPHY (2 Å)
主引用文献Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.
Structure, 28, 2020
6VIW
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BRD4_Bromodomain1 complex with pyrrolopyridone compound 18
分子名称: 4-[2-(2,4-difluorophenoxy)-5-(methylsulfonyl)phenyl]-N-ethyl-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide, Bromodomain-containing protein 4
著者Longenecker, K.L, Park, C.H, Qiu, W.
登録日2020-01-14
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.429 Å)
主引用文献Discovery ofN-Ethyl-4-[2-(4-fluoro-2,6-dimethyl-phenoxy)-5-(1-hydroxy-1-methyl-ethyl)phenyl]-6-methyl-7-oxo-1H-pyrrolo[2,3-c]pyridine-2-carboxamide (ABBV-744), a BET Bromodomain Inhibitor with Selectivity for the Second Bromodomain.
J.Med.Chem., 63, 2020
4H2J
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Structure of E. coli undecaprenyl diphosphate synthase in complex with BPH-1354
分子名称: N~4~-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]-N~1~-[4-(1H-imidazol-2-yl)phenyl]-2-nitrobenzene-1,4-dicarboxamide, Undecaprenyl pyrophosphate synthase
著者Zhu, W, Oldfield, E.
登録日2012-09-12
公開日2012-12-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Antibacterial drug leads targeting isoprenoid biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
6PS3
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XFEL beta2 AR structure by ligand exchange from Timolol to Carvedilol.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(8H-CARBAZOL-4-YLOXY)-3-[2-(2-METHOXYPHENOXY)ETHYLAMINO]PROPAN-2-OL, CHOLESTEROL, ...
著者Ishchenko, A, Stauch, B, Han, G.W, Batyuk, A, Shiriaeva, A, Li, C, Zatsepin, N.A, Weierstall, U, Liu, W, Nango, E, Nakane, T, Tanaka, R, Tono, K, Joti, Y, Iwata, S, Moraes, I, Gati, C, Cherezov, C.
登録日2019-07-12
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
Iucrj, 6, 2019
5GRK
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Crystal structure of Uracil DNA glycosylase -Xanthine complex from Bradyrhizobium diazoefficiens
分子名称: Blr0248 protein, XANTHINE
著者Patil, V.V, Ullas, V.C, Ahn, W, Varshney, U, Woo, E.
登録日2016-08-11
公開日2017-05-03
最終更新日2017-06-14
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Uracil DNA glycosylase (UDG) activities in Bradyrhizobium diazoefficiens: characterization of a new class of UDG with broad substrate specificity
Nucleic Acids Res., 45, 2017
6W8T
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Crystal structure of metacaspase 4 from Arabidopsis (microcrystals treated with calcium)
分子名称: Metacaspase-4, SULFATE ION
著者Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
登録日2020-03-21
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6PS6
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XFEL beta2 AR structure by ligand exchange from Timolol to Timolol.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(tert-butylamino)-3-[(4-morpholin-4-yl-1,2,5-thiadiazol-3-yl)oxy]propan-2-ol, CHOLESTEROL, ...
著者Ishchenko, A, Stauch, B, Han, G.W, Batyuk, A, Shiriaeva, A, Li, C, Zatsepin, N.A, Weierstall, U, Liu, W, Nango, E, Nakane, T, Tanaka, R, Tono, K, Joti, Y, Iwata, S, Moraes, I, Gati, C, Cherezov, C.
登録日2019-07-12
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
Iucrj, 6, 2019
6WBK
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Cryo-EM structure of human Pannexin 1 channel with deletion of N-terminal helix and C-terminal tail
分子名称: Pannexin-1
著者Lu, W, Du, J, Ruan, Z.
登録日2020-03-26
公開日2020-06-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.01 Å)
主引用文献Structures of human pannexin 1 reveal ion pathways and mechanism of gating.
Nature, 584, 2020
4H4C
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IspH in complex with (E)-4-fluoro-3-methylbut-2-enyl diphosphate
分子名称: (2E)-4-fluoro-3-methylbut-2-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
著者Span, I, Eisenreich, W, Jauch, J, Bacher, A, Groll, M.
登録日2012-09-17
公開日2013-01-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of Fluoro, Amino, and Thiol Inhibitors Bound to the [Fe(4) S(4) ] Protein IspH.
Angew.Chem.Int.Ed.Engl., 52, 2013
6VJV
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Crystal structure of the Prochlorococcus phage (myovirus P-SSM2) ferredoxin at 1.6 Angstroms
分子名称: ACETATE ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin, ...
著者Olmos Jr, J.L, Campbell, I.J, Miller, M.D, Xu, W, Kahanda, D, Atkinson, J.T, Sparks, N, Bennett, G.N, Silberg, J.J, Phillips Jr, G.N.
登録日2020-01-17
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Prochlorococcusphage ferredoxin: structural characterization and electron transfer to cyanobacterial sulfite reductases.
J.Biol.Chem., 295, 2020
1DAD
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DETHIOBIOTIN SYNTHETASE COMPLEXED WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DETHIOBIOTIN SYNTHETASE
著者Huang, W, Jia, J, Schneider, G, Lindqvist, Y.
登録日1995-05-08
公開日1996-06-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mechanism of an ATP-dependent carboxylase, dethiobiotin synthetase, based on crystallographic studies of complexes with substrates and a reaction intermediate.
Biochemistry, 34, 1995

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