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PDB: 12487 results

8FG2
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SARS-CoV-2 Nucleocapsid dimer structure determined from COVID-19 patients
Descriptor: Nucleoprotein
Authors:Casasanta, M, Jonaid, G.M, Kaylor, L, Luqiu, W, DiCecco, L, Solares, M, Berry, S, Kelly, D.F.
Deposit date:2022-12-12
Release date:2023-01-11
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structural Insights of the SARS-CoV-2 Nucleocapsid Protein: Implications for the Inner-workings of Rapid Antigen Tests.
Microsc Microanal, 29, 2023
4JUG
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BU of 4jug by Molmil
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
Deposit date:2013-03-24
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
8FFR
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BU of 8ffr by Molmil
Revised structure of the rabies virus nucleoprotein-RNA complex
Descriptor: Nucleoprotein, PHOSPHATE ION, RNA (99-MER)
Authors:Leyrat, C, Bourhis, J.M, Albertini, A.A.V, Wernimont, A.K, Muziol, T, Ravelli, R.B.G, Weissenhorn, W, Ruigrok, R.W.H, Jamin, M.
Deposit date:2022-12-09
Release date:2023-01-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module.
Viruses, 14, 2022
4JXQ
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BU of 4jxq by Molmil
Crystal structure of a GNAT superfamily phosphinothricin acetyltransferase (Pat) from Sinorhizobium meliloti 1021
Descriptor: 1,2-ETHANEDIOL, Acetyltransferase, CITRATE ANION, ...
Authors:Majorek, K.A, Cooper, D.R, Osinski, T, Ahmed, M, Stead, M, Hillerich, B, Seidel, R, Bonanno, J.B, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-03-28
Release date:2013-05-08
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of a GNAT superfamily phosphinothricin acetyltransferase (Pat) from Sinorhizobium meliloti 1021
To be Published
4J9Q
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Human DNA polymerase eta-DNA postinsertion binary complex with TG mispair
Descriptor: DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*TP*G)-3'), DNA (5'-D(*TP*C*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
Authors:Zhao, Y, Gregory, M, Biertumpfel, C, Hua, Y, Hanaoka, F, Yang, W.
Deposit date:2013-02-16
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JAA
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BU of 4jaa by Molmil
Factor inhibiting HIF-1 alpha in complex with consensus ankyrin repeat domain-(d)LEU peptide
Descriptor: CONSENSUS ANKYRIN REPEAT DOMAIN-(d)LEU, Hypoxia-inducible factor 1-alpha inhibitor, N-OXALYLGLYCINE, ...
Authors:Scotti, J.S, Ge, W, McDonough, M.A, Schofield, C.J.
Deposit date:2013-02-18
Release date:2014-02-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of an oxygenase in complex with substrate
To be Published
3TSJ
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BU of 3tsj by Molmil
Crystal structure of Phl p 4, a grass pollen allergen with glucose dehydrogenase activity
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, Pollen allergen Phl p 4, SODIUM ION, ...
Authors:Zafred, D, Nandy, A, Keller, W.
Deposit date:2011-09-13
Release date:2012-09-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and immunologic characterization of the major grass pollen allergen Phl p 4.
J. Allergy Clin. Immunol., 132, 2013
4J5H
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Crystal Structure of B. thuringiensis AiiA mutant F107W with N-decanoyl-L-homoserine bound at the active site
Descriptor: GLYCEROL, N-acyl homoserine lactonase, N-decanoyl-L-homoserine, ...
Authors:Liu, C.F, Liu, D, Momb, J, Thomas, P.W, Lajoie, A, Petsko, G.A, Fast, W, Ringe, D.
Deposit date:2013-02-08
Release date:2013-06-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A phenylalanine clamp controls substrate specificity in the quorum-quenching metallo-gamma-lactonase from Bacillus thuringiensis.
Biochemistry, 52, 2013
3TYS
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BU of 3tys by Molmil
Crystal structure of transcriptional regulator VanUg, Form II
Descriptor: Predicted transcriptional regulator
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Depardieu, F, Courvalin, P, Shabalin, I, Chruszcz, M, Minor, W, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-26
Release date:2011-10-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.121 Å)
Cite:Crystal structure of transcriptional regulator VanUg, Form II
TO BE PUBLISHED
3TYR
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BU of 3tyr by Molmil
Crystal structure of transcriptional regulator VanUg, Form I
Descriptor: Transcriptional regulator
Authors:Stogios, P.J, Evdokimova, E, Wawrzak, Z, Dong, A, Depardieu, F, Courvalin, P, Shabalin, I, Chruszcz, M, Minor, W, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-26
Release date:2011-10-12
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Crystal structure of transcriptional regulator VanUg, Form I
TO BE PUBLISHED
3TZC
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BU of 3tzc by Molmil
Crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (FabG)(Y155F) from Vibrio cholerae
Descriptor: 3-oxoacyl-[acyl-carrier protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Hou, J, Chruszcz, M, Zheng, H, Grabowski, M, Domagalski, M, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-09-27
Release date:2011-10-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Dissecting the Structural Elements for the Activation of beta-Ketoacyl-(Acyl Carrier Protein) Reductase from Vibrio cholerae.
J.Bacteriol., 198, 2015
4KO6
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BU of 4ko6 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95K/Y108F)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Meng, W, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95K/Y108F)
To be Published
4JYL
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BU of 4jyl by Molmil
Crystal structure of enoyl-CoA hydratase from Thermoplasma volcanium GSS1
Descriptor: CHLORIDE ION, Enoyl-CoA hydratase, SULFATE ION
Authors:Shabalin, I.G, Cooper, D.R, Majorek, K.A, Mikolajczak, K, Porebski, P.J, Stead, M, Hillerich, B.S, Ahmed, M, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-03-29
Release date:2013-04-17
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure of enoyl-CoA hydratase from Thermoplasma volcanium GSS1
To be Published
3R65
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BU of 3r65 by Molmil
MthK channel pore E92Q mutant
Descriptor: Calcium-gated potassium channel mthK, POTASSIUM ION
Authors:Shi, N, Zeng, W, Ye, S, Li, Y, Jiang, Y.
Deposit date:2011-03-21
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crucial points within the pore as determinants of K+ channel conductance and gating
J.Mol.Biol., 411, 2011
3REZ
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BU of 3rez by Molmil
glycoprotein GPIb variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Platelet glycoprotein Ib beta chain, ...
Authors:McEwan, P.A, Yang, W, Carr, K.H, Mo, X, Zheng, X, Li, R, Emsley, J.
Deposit date:2011-04-05
Release date:2012-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Quaternary organization of GPIb-IX complex and insights into Bernard-Soulier syndrome revealed by the structures of GPIb beta and a GPIb beta/GPIX chimera
Blood, 118, 2011
3R9I
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BU of 3r9i by Molmil
2.6A resolution structure of MinD complexed with MinE (12-31) peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division topological specificity factor, Septum site-determining protein minD
Authors:Lovell, S, Battaile, K.P, Park, K.-T, Wu, W, Holyoak, T, Lutkenhaus, J.
Deposit date:2011-03-25
Release date:2011-08-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Min Oscillator Uses MinD-Dependent Conformational Changes in MinE to Spatially Regulate Cytokinesis.
Cell(Cambridge,Mass.), 146, 2011
4KCU
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BU of 4kcu by Molmil
Pyruvate kinase (PYK) from Trypanosoma brucei soaked with D-Malate
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, D-MALATE, MAGNESIUM ION, ...
Authors:Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-04-24
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Pyruvate kinases have an intrinsic and conserved decarboxylase activity.
Biochem.J., 458, 2014
4KDM
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BU of 4kdm by Molmil
Crystal structure of the hemagglutinin of ferret-transmissible H5N1 virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Lu, X, Shi, Y, Zhang, W, Zhang, Y, Qi, J, Gao, G.F.
Deposit date:2013-04-25
Release date:2013-07-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Structure and receptor-binding properties of an airborne transmissible avian influenza A virus hemagglutinin H5 (VN1203mut).
Protein Cell, 4, 2013
4KFO
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BU of 4kfo by Molmil
Structure-Based Discovery of Novel Amide-Containing Nicotinamide Phosphoribosyltransferase (Nampt) Inhibitors
Descriptor: 1,2-ETHANEDIOL, N-{4-[(3,5-difluorophenyl)sulfonyl]benzyl}imidazo[1,2-a]pyridine-6-carboxamide, Nicotinamide phosphoribosyltransferase, ...
Authors:Zheng, X, Bauer, P, Baumeister, T, Buckmelter, A.J, Caligiuri, M, Clodfelter, K.H, Han, B, Ho, Y, Kley, N, Lin, J, Reynolds, D.J, Sharma, G, Smith, C.C, Wang, Z, Dragovich, P.S, Gunzner-Tosteb, J, Liederer, B.M, Ly, J, O'Brien, T, Oh, A, Wang, L, Wang, W, Xiao, Y, Zak, M, Zhao, G, Yuen, P, Bair, K.W.
Deposit date:2013-04-27
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-based identification of ureas as novel nicotinamide phosphoribosyltransferase (nampt) inhibitors.
J.Med.Chem., 56, 2013
3RJS
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BU of 3rjs by Molmil
Crystal structure of Dynein Light Chain 8a (DLC8) from Toxoplasma gondii at 1.5 A resolution
Descriptor: Dynein light chain motor protein
Authors:Qureshi, B, Hoehne, W, Scheerer, P.
Deposit date:2011-04-15
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Dynein light chain 8a of Toxoplasma gondii, a unique conoid-localized beta-strand-swapped homodimer, is required for an efficient parasite growth.
Faseb J., 27, 2013
3RJX
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BU of 3rjx by Molmil
Crystal Structure of Hyperthermophilic Endo-Beta-1,4-glucanase
Descriptor: Endoglucanase FnCel5A
Authors:Zheng, B.S, Yang, W, Zhao, X.Y, Wang, Y.G, Lou, Z.Y, Rao, Z.H, Feng, Y.
Deposit date:2011-04-15
Release date:2011-12-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of hyperthermophilic endo-beta-1,4-glucanase: implications for catalytic mechanism and thermostability.
J.Biol.Chem., 287, 2012
3RJY
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BU of 3rjy by Molmil
Crystal Structure of Hyperthermophilic Endo-beta-1,4-glucanase in complex with substrate
Descriptor: Endoglucanase FnCel5A, PHOSPHATE ION, alpha-D-glucopyranose
Authors:Zheng, B, Yang, W, Zhao, X, Wang, Y, Lou, Z, Rao, Z, Feng, Y.
Deposit date:2011-04-15
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of hyperthermophilic Endo-beta-1,4-glucanase: Implications for catalytic mechanism and thermostability.
J.Biol.Chem., 287, 2012
3RSS
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BU of 3rss by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NADP
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, Putative uncharacterized protein, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-02
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3RRF
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BU of 3rrf by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Bifunctional NAD(P)H-hydrate repair enzyme Nnr, GLYCEROL, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-04-29
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3RTC
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Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NAD and ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-03
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012

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PDB entries from 2024-07-17

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