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PDB: 12479 件

6FPL
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TETR(D) E147A MUTANT IN COMPLEX WITH TETRACYCLINE AND MAGNESIUM
分子名称: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
著者Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
登録日2018-02-11
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4P9U
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FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with DNA
分子名称: DNA (31-MER), Fatty acid metabolism regulator protein
著者Kull, F.J, Shi, W.
登録日2014-04-05
公開日2015-02-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.208 Å)
主引用文献The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
3BFC
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class A beta-lactamase SED-G238C complexed with imipenem
分子名称: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Class A beta-lactamase Sed1
著者Pernot, L, Petrella, S, Sougakoff, W.
登録日2007-11-21
公開日2007-12-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Acyl-intermediate structures of the class A beta-lactamase SED-G238C
To be Published
7BP2
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Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
分子名称: GLYCEROL, Histone H2A.6, Histone H2B.1, ...
著者Luo, Q, Baihui, W.
登録日2020-03-21
公開日2020-11-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
2YYK
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Crystal structure of the mutant of HpaB (T198I, A276G, and R466H)
分子名称: 4-hydroxyphenylacetate-3-hydroxylase, ACETIC ACID, GLYCEROL, ...
著者Kim, S.-H, Hisano, T, Takeda, K, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-04-30
公開日2007-09-04
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Oxygenase Component (HpaB) of the 4-Hydroxyphenylacetate 3-Monooxygenase from Thermus thermophilus HB8
J.Biol.Chem., 282, 2007
7BP5
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Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1)
分子名称: ASN-ASP-PRO-ASP-TYR, GLYCEROL, Histone H2A.6, ...
著者Luo, Q, Baihui, W.
登録日2020-03-21
公開日2020-11-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B.
Proc.Natl.Acad.Sci.USA, 117, 2020
6FPM
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BU of 6fpm by Molmil
TetR(D) T103A mutant in complex with tetracycline and magnesium
分子名称: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
著者Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
登録日2018-02-11
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4P96
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BU of 4p96 by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae
分子名称: Fatty acid metabolism regulator protein
著者Shi, W, Kull, F.J.
登録日2014-04-02
公開日2015-02-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
4KK1
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BU of 4kk1 by Molmil
Crystal Structure of TSC1 core domain from S. pombe
分子名称: Tuberous sclerosis 1 protein homolog
著者Sun, W, Zhu, Y, Wang, Z.Z, Zhong, Q, Gao, F, Lou, J.Z, Gong, W.M, Xu, W.Q.
登録日2013-05-05
公開日2013-07-17
最終更新日2013-07-31
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations.
Nat Commun, 4, 2013
6QL4
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Crystal structure of nucleotide-free Mgm1
分子名称: 1,2-ETHANEDIOL, Putative mitochondrial dynamin protein
著者Faelber, K, Dietrich, L, Noel, J.K, Wollweber, F, Pfitzner, A.-K, Muehleip, A, Sanchez, R, Kudryashev, M, Chiaruttin, N, Lilie, H, Schlegel, J, Rosenbaum, E, Hessenberger, M, Matthaeus, C, Noe, F, Roux, A, vanderLaan, M, Kuehlbrandt, W, Daumke, O.
登録日2019-01-31
公開日2019-07-03
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure and assembly of the mitochondrial membrane remodelling GTPase Mgm1.
Nature, 571, 2019
4KK0
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Crystal Structure of TSC1 core domain from S. pombe
分子名称: Tuberous sclerosis 1 protein homolog
著者Sun, W, Zhu, Y, Wang, Z.Z, Zhong, Q, Gao, F, Lou, J.Z, Gong, W.M, Xu, W.Q.
登録日2013-05-05
公開日2013-07-17
最終更新日2013-07-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations.
Nat Commun, 4, 2013
6PWX
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Cryo-EM structure of RbBP5 bound to the nucleosome
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
1LNL
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BU of 1lnl by Molmil
Structure of deoxygenated hemocyanin from Rapana thomasiana
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, hemocyanin
著者Perbandt, M, Guthoehrlein, E.W, Rypniewski, W, Idakieva, K, Stoeva, S, Voelter, W, Genov, N, Betzel, C.
登録日2002-05-03
公開日2003-06-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structure of a functional unit from the wall of a gastropod hemocyanin offers a possible mechanism for cooperativity
Biochemistry, 42, 2003
3NV5
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BU of 3nv5 by Molmil
Crystal Structure of Cytochrome P450 CYP101D2
分子名称: Cytochrome P450, DI(HYDROXYETHYL)ETHER, PROTOPORPHYRIN IX CONTAINING FE
著者Yang, W, Bell, S.G, Wang, H, Zhou, W.H, Bartlam, M, Wong, L.L, Rao, Z.
登録日2010-07-08
公開日2010-11-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The structure of CYP101D2 unveils a potential path for substrate entry into the active site
Biochem.J., 433, 2011
1L8Z
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BU of 1l8z by Molmil
Solution structure of HMG box 5 in human upstream binding factor
分子名称: upstream binding factor 1
著者Yang, W, Xu, Y, Wu, J, Zeng, W, Shi, Y.
登録日2002-03-22
公開日2002-06-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and DNA binding property of the fifth HMG box domain in comparison with the first HMG box domain in human upstream binding factor
Biochemistry, 42, 2003
3BFG
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BU of 3bfg by Molmil
class A beta-lactamase SED-G238C complexed with meropenem
分子名称: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, Class A beta-lactamase Sed1
著者Pernot, L, Petrella, S, Sougakoff, W.
登録日2007-11-21
公開日2007-12-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献acyl-intermediate structures of the class A beta-lactamase SED-G238C
To be Published
4OVO
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BU of 4ovo by Molmil
REFINED X-RAY CRYSTAL STRUCTURES OF THE REACTIVE SITE MODIFIED OVOMUCOID INHIBITOR THIRD DOMAINS FROM SILVER PHEASANT (OMSVP3(ASTERISK)) AND FROM JAPANESE QUAIL (OMJPQ3(ASTERISK))
分子名称: OVOMUCOID THIRD DOMAIN CLEAVED RDI
著者Musil, D, Bode, W.
登録日1991-05-13
公開日1993-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Refined X-ray crystal structures of the reactive site modified ovomucoid inhibitor third domains from silver pheasant (OMSVP3*) and from Japanese quail (OMJPQ3*).
J.Mol.Biol., 220, 1991
3BFE
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BU of 3bfe by Molmil
Crystal Structure of the Class A beta-lactamase SED-1 from Citrobacter sedlakii
分子名称: Class A beta-lactamase Sed1, THIOCYANATE ION
著者Pernot, L, Petrella, S, Sougakoff, W.
登録日2007-11-21
公開日2007-12-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献acyl-intermediate structures of the class A beta-lactamase SED-G238C
To be Published
2PMF
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BU of 2pmf by Molmil
The crystal structure of a human glycyl-tRNA synthetase mutant
分子名称: CHLORIDE ION, GLYCEROL, Glycyl-tRNA synthetase
著者Xie, W.
登録日2007-04-21
公開日2007-05-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Long-range structural effects of a Charcot-Marie- Tooth disease-causing mutation in human glycyl-tRNA synthetase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3BFD
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BU of 3bfd by Molmil
Crystal Structure of the Class A beta-lactamase SED-G238C mutant from Citrobacter sedlakii
分子名称: CACODYLATE ION, Class A beta-lactamase Sed1
著者Pernot, L, Petrella, S, Sougakoff, W.
登録日2007-11-21
公開日2007-12-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献acyl-intermediate structures of the class A beta-lactamase SED-G238C
To be Published
6GMS
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BU of 6gms by Molmil
Solution NMR structure of the major type IV pilin PpdD from enterohemorrhagic Escherichia coli (EHEC)
分子名称: Prepilin peptidase-dependent protein D
著者Amorim, G.C, Bardiaux, B, Luna-Rico, A, Zeng, W, Guilvout, I, Egelman, E, Nilges, M, Francetic, O, Izadi-Pruneyre, N.
登録日2018-05-28
公開日2019-05-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Structure, 27, 2019
3BMP
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BU of 3bmp by Molmil
HUMAN BONE MORPHOGENETIC PROTEIN-2 (BMP-2)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PROTEIN (BONE MORPHOGENETIC PROTEIN 2 (BMP-2))
著者Scheufler, C, Sebald, W, Huelsmeyer, M.
登録日1999-03-12
公開日2000-03-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of human bone morphogenetic protein-2 at 2.7 A resolution.
J.Mol.Biol., 287, 1999
6FKI
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BU of 6fki by Molmil
Chloroplast F1Fo conformation 3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Hahn, A, Vonck, J, Mills, D.J, Meier, T, Kuehlbrandt, W.
登録日2018-01-24
公開日2018-05-23
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure, mechanism, and regulation of the chloroplast ATP synthase.
Science, 360, 2018
3BO8
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BU of 3bo8 by Molmil
The High Resolution Crystal Structure of HLA-A1 Complexed with the MAGE-A1 Peptide
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Kumar, P, Vahedi-Faridi, A, Saenger, W, Ziegler, A, Uchanska-Ziegler, B.
登録日2007-12-17
公開日2008-12-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Conformational changes within the HLA-A1:MAGE-A1 complex induced by binding of a recombinant antibody fragment with TCR-like specificity
Protein Sci., 18, 2009
1LGF
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Crystal structure of OxyB, a Cytochrome P450 Implicated in an Oxidative Phenol Coupling Reaction During Vancomycin Biosynthesis
分子名称: P450 monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
著者Pylypenko, O, Zerbe, K, Vitali, F, Zhang, W, Vrijbloed, J.W, Robinson, J.A, Schlichting, I.
登録日2002-04-15
公開日2002-12-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of OxyB, a Cytochrome P450 Implicated in an Oxidative Phenol Coupling Reaction during Vancomycin Biosynthesis.
J.Biol.Chem., 277, 2002

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