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PDB: 12479 件

4XZY
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BU of 4xzy by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
分子名称: GLYCEROL, Peptidase S46
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2015-02-05
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
6PKL
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BU of 6pkl by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.59A resolution (#7)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.59 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
4Y0H
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BU of 4y0h by Molmil
Gamma-aminobutyric acid aminotransferase inactivated by (1S,3S)-3-amino-4-difluoromethylenyl-1-cyclopentanoic acid (CPP-115)
分子名称: 4-aminobutyrate aminotransferase, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
著者Rui, W, Ruslan, S, Hyunbeom, L, Emma, H.D, Jose, I.J, Neil, K, Richard, B.S, Dali, L.
登録日2015-02-06
公開日2015-03-11
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Mechanism of inactivation of gamma-aminobutyric acid aminotransferase by (1S,3S)-3-amino-4-difluoromethylenyl-1-cyclopentanoic acid (CPP-115)
J. Am. Chem. Soc., 2015
6PKT
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BU of 6pkt by Molmil
MicroED structure of proteinase K from merging low-dose, platinum pre-coated lamellae at 1.85A resolution (LDPT)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.85 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
4XM1
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BU of 4xm1 by Molmil
N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus in the presence of cadmium
分子名称: CADMIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Nakamura, T, Niiyama, M, Hashimoto, W, Ida, K, Uegaki, K.
登録日2015-01-14
公開日2015-06-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.
Acta Crystallogr.,Sect.F, 71, 2015
2ZUX
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BU of 2zux by Molmil
Crystal structure of rhamnogalacturonan lyase YesW complexed with rhamnose
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, YesW protein, ...
著者Ochiai, A, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
登録日2008-10-28
公開日2009-02-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural determinants responsible for substrate recognition and mode of action in family 11 polysaccharide lyases
J.Biol.Chem., 284, 2009
4XSO
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BU of 4xso by Molmil
Crystal structure of apo-form Alr3699/HepE from Anabaena sp. strain PCC 7120
分子名称: Alr3699 protein, GLYCEROL
著者Wang, X.P, Dai, Y.N, Jiang, Y.L, Cheng, W, Chen, Y.X, Zhou, C.Z.
登録日2015-01-22
公開日2016-01-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural and enzymatic analyses of a glucosyltransferase Alr3699/HepE involved in Anabaena heterocyst envelop polysaccharide biosynthesis
Glycobiology, 26, 2016
4XVL
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BU of 4xvl by Molmil
Binary complex of human polymerase nu and DNA with the finger domain open
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*GP*AP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*AP*GP*CP*GP*TP*CP*A)-3'), ...
著者Lee, Y.-S, Yang, W.
登録日2015-01-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis.
Nat.Struct.Mol.Biol., 22, 2015
6PKN
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BU of 6pkn by Molmil
MicroED structure of proteinase K from an unpolished, platinum-coated, single lamella at 2.08A resolution (#9)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.08 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
4Y01
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BU of 4y01 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
分子名称: GLYCEROL, Peptidase S46
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2015-02-05
公開日2015-07-15
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
6PKJ
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BU of 6pkj by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.17A resolution (#2)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.176 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKO
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BU of 6pko by Molmil
MicroED structure of proteinase K from a platinum coated, unpolished, single lamella at 2.07A resolution (#12)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.07 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
3APM
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BU of 3apm by Molmil
Crystal structure of the human SNP PAD4 protein
分子名称: Protein-arginine deiminase type-4
著者Horikoshi, N, Tachiwana, H, Saito, K, Osakabe, A, Sato, M, Yamada, M, Akashi, S, Nishimura, Y, Kagawa, W, Kurumizaka, H.
登録日2010-10-19
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical analyses of the human PAD4 variant encoded by a functional haplotype gene
Acta Crystallogr.,Sect.D, 67, 2011
3DR0
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BU of 3dr0 by Molmil
Structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002
分子名称: Cytochrome c6, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Bialek, W, Krzywda, S, Jaskolski, M, Szczepaniak, A.
登録日2008-07-10
公開日2009-07-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Atomic-resolution structure of reduced cyanobacterial cytochrome c6 with an unusual sequence insertion
Febs J., 276, 2009
3AT7
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BU of 3at7 by Molmil
Crystal structure of bacterial cell-surface alginate-binding protein Algp7
分子名称: Alginate-binding flagellin
著者Maruyama, Y, Ochiai, A, Mikami, B, Hashimoto, W, Murata, K.
登録日2010-12-27
公開日2011-02-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of bacterial cell-surface alginate-binding protein with an M75 peptidase motif.
Biochem.Biophys.Res.Commun., 405, 2011
6FNT
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BU of 6fnt by Molmil
Ergothioneine-biosynthetic methyltransferase EgtD in complex with pyrrolidinohistidine
分子名称: Histidine N-alpha-methyltransferase, Pyrrolidinohistidine
著者Vit, A, Blankenfeldt, W, Seebeck, F.P.
登録日2018-02-05
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018
6PKR
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BU of 6pkr by Molmil
MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.79A resolution (#13)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.79 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
3AV1
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BU of 3av1 by Molmil
The human nucleosome structure containing the histone variant H3.2
分子名称: 146-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Tachiwana, H, Osakabe, A, Shiga, T, Miya, Y, Kimura, H, Kagawa, W, Kurumizaka, H.
登録日2011-02-18
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of human nucleosomes containing major histone H3 variants
Acta Crystallogr.,Sect.D, 67, 2011
6FPK
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BU of 6fpk by Molmil
Co-translational folding intermediate dictates membrane targeting of the signal recognition particle (SRP)- receptor
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Signal recognition particle receptor FtsY
著者Karniel, A, Mrusek, D, Steinchen, W, Dym, O, Bange, G, Bibi, E.
登録日2018-02-11
公開日2018-05-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Co-translational Folding Intermediate Dictates Membrane Targeting of the Signal Recognition Particle Receptor.
J. Mol. Biol., 430, 2018
4XZ8
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BU of 4xz8 by Molmil
The crystal structure of Erve virus nucleoprotein
分子名称: Nucleoprotein
著者Guo, Y, Wang, W, Liu, X, Wang, X, Wang, J, Huo, T, Liu, B.
登録日2015-02-04
公開日2015-09-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural and Functional Diversity of Nairovirus-Encoded Nucleoproteins.
J.Virol., 89, 2015
4Y02
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BU of 4y02 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground)
分子名称: GLYCEROL, POTASSIUM ION, Peptidase S46
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2015-02-05
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
4H2J
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BU of 4h2j by Molmil
Structure of E. coli undecaprenyl diphosphate synthase in complex with BPH-1354
分子名称: N~4~-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]-N~1~-[4-(1H-imidazol-2-yl)phenyl]-2-nitrobenzene-1,4-dicarboxamide, Undecaprenyl pyrophosphate synthase
著者Zhu, W, Oldfield, E.
登録日2012-09-12
公開日2012-12-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Antibacterial drug leads targeting isoprenoid biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
1PPG
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BU of 1ppg by Molmil
The refined 2.3 angstroms crystal structure of human leukocyte elastase in a complex with a valine chloromethyl ketone inhibitor
分子名称: HUMAN LEUKOCYTE ELASTASE, MEO-SUCCINYL-ALA-ALA-PRO-VAL CHLOROMETHYLKETONE, alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bode, W, Wei, A-Z.
登録日1991-10-24
公開日1994-01-31
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The refined 2.3 A crystal structure of human leukocyte elastase in a complex with a valine chloromethyl ketone inhibitor.
FEBS Lett., 234, 1988
6PKK
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BU of 6pkk by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.18A resolution (#5)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.176 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKP
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BU of 6pkp by Molmil
MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.91A resolution (#10)
分子名称: Proteinase K
著者Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
登録日2019-06-29
公開日2019-09-04
最終更新日2019-12-18
実験手法ELECTRON CRYSTALLOGRAPHY (1.91 Å)
主引用文献Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019

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