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PDB: 12479 results

3O3M
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(R)-2-Hydroxyisocaproyl-CoA Dehydratase
Descriptor: HYDROSULFURIC ACID, IRON/SULFUR CLUSTER, SULFATE ION, ...
Authors:Knauer, S.H, Buckel, W, Dobbek, H.
Deposit date:2010-07-25
Release date:2011-03-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural Basis for Reductive Radical Formation and Electron Recycling in (R)-2-Hydroxyisocaproyl-CoA Dehydratase.
J.Am.Chem.Soc., 133, 2011
4QV3
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yCP beta5-M45V mutant
Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-14
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
4QWL
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yCP beta5-A50V mutant in complex with carfilzomib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-16
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
4QW5
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yCP beta5-M45A mutant in complex with carfilzomib
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-16
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
4QY2
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Structure of H10 from human-infecting H10N8 virus in complex with human receptor analog
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid, hemagglutinin
Authors:Wang, M, Zhang, W, Qi, J, Wang, F, Zhou, J, Bi, Y, Wu, Y, Sun, H, Liu, J, Huang, C, Li, X, Yan, J, Shu, Y, Shi, Y, Gao, G.F.
Deposit date:2014-07-23
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural basis for preferential avian receptor binding by the human-infecting H10N8 avian influenza virus
Nat Commun, 6, 2015
4QZ7
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yCP beta5-A50V mutant in complex with the epoxyketone inhibitor ONX 0914
Descriptor: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-27
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
3NUE
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BU of 3nue by Molmil
The structure of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase from mycobacterium tuberculosis complexed with tryptophan
Descriptor: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Parker, E.J, Jameson, G.B, Jiao, W, Webby, C.J, Baker, E.N, Baker, H.M.
Deposit date:2010-07-06
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Synergistic allostery, a sophisticated regulatory network for the control of aromatic amino acid biosynthesis in Mycobacterium tuberculosis
J.Biol.Chem., 285, 2010
2MY5
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Solution Structure of KstB-PCP in kosinostatin biosynthesis
Descriptor: N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide, Peptidyl carrier protein
Authors:Zhao, B, Lan, W, Wang, C, Tang, G, Cao, C.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:1H and 15N Assigned Chemical Shifts for KstB-PCP
To be Published
4QZ0
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yCP beta5-M45V mutant in complex with the epoxyketone inhibitor ONX 0914
Descriptor: 1,2,4-trideoxy-4-methyl-2-{[N-(morpholin-4-ylacetyl)-L-alanyl-O-methyl-L-tyrosyl]amino}-1-phenyl-D-xylitol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-27
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
1T6Z
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Crystal structure of riboflavin bound TM379
Descriptor: RIBOFLAVIN, riboflavin kinase/FMN adenylyltransferase
Authors:Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of ADP bound FAD synthetase
To be Published
4RDK
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BU of 4rdk by Molmil
Crystal structure of Norovirus Boxer P domain in complex with Lewis b tetrasaccharide
Descriptor: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
Deposit date:2014-09-19
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.629 Å)
Cite:Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
1T8Z
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Atomic Structure of A Novel Tryptophan-Zipper Pentamer
Descriptor: DODECAETHYLENE GLYCOL, Major outer membrane lipoprotein, SULFATE ION
Authors:Liu, J, Yong, W, Deng, Y, Kallenbach, N.R, Lu, M.
Deposit date:2004-05-13
Release date:2004-11-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Atomic structure of a tryptophan-zipper pentamer.
Proc.Natl.Acad.Sci.USA, 101, 2004
4R7L
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BU of 4r7l by Molmil
Structure of Human Leukotriene A4 Hydrolase in complex with inhibitor H1
Descriptor: ACETATE ION, GLYCEROL, IMIDAZOLE, ...
Authors:Ouyang, P, Cui, K, Lu, W, Huang, J.
Deposit date:2014-08-27
Release date:2015-11-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Human Leukotriene A4 Hydrolase in complex with SAHA
To be Published
2MY6
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BU of 2my6 by Molmil
Structure of KstB-PCP(apo)
Descriptor: Peptidyl carrier protein
Authors:Zhao, B, Lan, W, Wang, C, Tang, G, Cao, C.
Deposit date:2015-01-20
Release date:2016-01-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H and 15N Assigned Chemical Shifts for KstB-PCP
To be Published
3O1K
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BU of 3o1k by Molmil
Crystal structure of putative dihydroneopterin aldolase (FolB) from Vibrio cholerae O1 biovar El Tor str. N16961
Descriptor: 1,2-ETHANEDIOL, Dihydroneopterin aldolase FolB, putative
Authors:Nocek, B, Zhou, M, Papazisi, L, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-07-21
Release date:2010-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of putative dihydroneopterin aldolase (FolB) from Vibrio cholerae O1 biovar El Tor str. N16961
To be Published
1U37
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BU of 1u37 by Molmil
Auto-inhibition Mechanism of X11s/Mints Family Scaffold Proteins Revealed by the Closed Conformation of the Tandem PDZ Domains
Descriptor: amyloid beta A4 precursor protein-binding, family A, member 1
Authors:Feng, W, Long, J.-F, Chan, L.-N, He, C, Fu, A, Xia, J, Ip, N.Y, Zhang, M.
Deposit date:2004-07-21
Release date:2005-07-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Autoinhibition of X11/Mint scaffold proteins revealed by the closed conformation of the PDZ tandem
Nat.Struct.Mol.Biol., 12, 2005
3NTL
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BU of 3ntl by Molmil
Crystal Structure of Glucose-1-phosphatase (AgpE) from Enterobacter cloacae
Descriptor: Acid glucose-1-phosphate phosphatase, CALCIUM ION, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Grishkovskaya, I, Hoehne, W.
Deposit date:2010-07-05
Release date:2011-07-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal Structure of Glucose-1-phosphatase (AgpE) from Enterobacter cloacae
To be Published
5T0V
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BU of 5t0v by Molmil
Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
Descriptor: Frataxin homolog, mitochondrial, Iron sulfur cluster assembly protein 1
Authors:Ranatunga, W, Gakh, O, Galeano, B.K, Smith IV, D.Y, Soderberg, C.A, Al-Karadaghi, S, Thompson, J.R, Isaya, G.
Deposit date:2016-08-16
Release date:2016-08-31
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17.5 Å)
Cite:Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
J. Biol. Chem., 291, 2016
1U1X
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BU of 1u1x by Molmil
Structure and function of phenazine-biosynthesis protein PhzF from Pseudomonas fluorescens 2-79
Descriptor: (2S,3S)-TRANS-2,3-DIHYDRO-3-HYDROXYANTHRANILIC ACID, Phenazine biosynthesis protein phzF
Authors:Blankenfeldt, W, Kuzin, A.P, Skarina, T, Korniyenko, Y, Tong, L, Bayer, P, Janning, P, Thomashow, L.S, Mavrodi, D.V.
Deposit date:2004-07-16
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens.
Proc.Natl.Acad.Sci.USA, 101, 2004
1U2K
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BU of 1u2k by Molmil
Crystal structure of the C-terminal domain from the catalase-peroxidase KatG of Escherichia coli (I41)
Descriptor: Peroxidase/catalase HPI
Authors:Carpena, X, Melik-Adamyan, W, Loewen, P.C, Fita, I.
Deposit date:2004-07-19
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the C-terminal domain of the catalase-peroxidase KatG from Escherichia coli.
Acta Crystallogr.,Sect.D, 60, 2004
4QUX
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BU of 4qux by Molmil
yCP beta5-A49T-mutant
Descriptor: MAGNESIUM ION, Probable proteasome subunit alpha type-7, Proteasome subunit alpha type-1, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-14
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
2MPZ
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BU of 2mpz by Molmil
Atomic model of the Abeta D23N "Iowa" mutant using solid-state NMR, EM and Rosetta modeling
Descriptor: Amyloid beta A4 protein
Authors:Sgourakis, N.G, Qiang, W.
Deposit date:2014-06-10
Release date:2015-04-22
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Modeling an in-register, parallel "iowa" a beta fibril structure using solid-state NMR data from labeled samples with rosetta.
Structure, 23, 2015
5SVE
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BU of 5sve by Molmil
Structure of Calcineurin in complex with NFATc1 LxVP peptide
Descriptor: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
Authors:Sheftic, S.R, Page, R, Peti, W.
Deposit date:2016-08-05
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Investigating the human Calcineurin Interaction Network using the pi LxVP SLiM.
Sci Rep, 6, 2016
4QVW
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BU of 4qvw by Molmil
yCP beta5-A49S-mutant in complex with bortezomib
Descriptor: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ...
Authors:Huber, E.M, Heinemeyer, W, Groll, M.
Deposit date:2014-07-16
Release date:2015-02-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
3O1R
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BU of 3o1r by Molmil
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C, Jia, G, Hou, G, Dai, Q, Zhang, W, Zheng, G, Jian, X, Yang, C.-G, Cui, Q, He, C.
Deposit date:2010-07-21
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010

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