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PDB: 34568 results

8YKX
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Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid
Descriptor: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Molecular basis of ligand recognition and activation of the human succinate receptor SUCR1.
Cell Res., 34, 2024
8XNH
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BU of 8xnh by Molmil
Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 5C8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5C8-VH, 5C8-VL, ...
Authors:Fan, P.F, Ren, Y, Yu, C.M, Chen, W.
Deposit date:2023-12-30
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6
To Be Published
8WWX
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Ube1L acts akin to a mitt, that mediates UbcH8 binding and orchestrates "E1-E2" interaction
Descriptor: Ubiquitin-like modifier-activating enzyme 7
Authors:Dag, C, Elgin, E.S, Lee, W, Ziarek, J.J.
Deposit date:2023-10-27
Release date:2023-11-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ube1L acts akin to a mitt, that mediates UbcH8 binding and orchestrates "E1-E2" interaction
To Be Published
9AUO
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BU of 9auo by Molmil
Structure of SARS-CoV-2 Mpro mutant (L50F,T304I)
Descriptor: 3C-like proteinase nsp5
Authors:Gajiwala, K.S, Greasley, S.E, Ferre, R.A, Liu, W, Stewart, A.E.
Deposit date:2024-02-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.423 Å)
Cite:In vitro selection and analysis of SARS-CoV-2 nirmatrelvir resistance mutations contributing to clinical virus resistance surveillance.
Sci Adv, 10, 2024
8VHW
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BU of 8vhw by Molmil
Neutron Structure of Peroxide-Soaked Trp161Phe MnSOD
Descriptor: HYDROGEN PEROXIDE, MANGANESE (II) ION, Superoxide dismutase [Mn], ...
Authors:Azadmanesh, J, Slobodnik, K, Struble, L.R, Lutz, W.E, Coates, L, Weiss, K.L, Myles, D.A.A, Kroll, T, Borgstahl, G.E.O.
Deposit date:2024-01-02
Release date:2024-07-31
Method:NEUTRON DIFFRACTION (2.3 Å)
Cite:Revealing the atomic and electronic mechanism of human manganese superoxide dismutase product inhibition.
Biorxiv, 2024
8XPG
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BU of 8xpg by Molmil
The Crystal Structure of polo box domain of Plk4 from Biortus.
Descriptor: SULFATE ION, Serine/threonine-protein kinase PLK4
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Zhang, B.
Deposit date:2024-01-03
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of polo box domain of Plk4 from Biortus.
To Be Published
8X0J
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BU of 8x0j by Molmil
old yellow enzymes-Q102A/Y169F/R215A/R308A
Descriptor: NADPH dehydrogenase, PHOSPHATE ION
Authors:Lei, W, Wei, S.
Deposit date:2023-11-04
Release date:2024-07-10
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Unlocking the function promiscuity of old yellow enzyme to catalyze asymmetric Morita-Baylis-Hillman reaction
To Be Published
9ERY
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BU of 9ery by Molmil
Co-crystal strucutre of PD-L1 with low molecular weight inhibitor
Descriptor: 5-[[5-[[2-[bis(fluoranyl)methyl]-3-(2,3-dihydro-1,4-benzodioxin-6-yl)phenyl]methoxy]-2-[(2-hydroxyethylamino)methyl]phenoxy]methyl]pyridine-3-carbonitrile, Programmed cell death 1 ligand 1, SULFATE ION
Authors:Plewka, J, Magiera-Mularz, K, Zhang, W.
Deposit date:2024-03-25
Release date:2024-07-24
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Design, synthesis, and evaluation of antitumor activity of 2-arylmethoxy-4-(2-fluoromethyl-biphenyl-3-ylmethoxy) benzylamine derivatives as PD-1/PD-l1 inhibitors.
Eur.J.Med.Chem., 276, 2024
8XPX
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BU of 8xpx by Molmil
The Crystal Structure of PARP12 from Biortus.
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Wang, F, Cheng, W, Lv, Z, Qi, J, Shen, Z.
Deposit date:2024-01-04
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Crystal Structure of PARP12 from Biortus.
To Be Published
8XB4
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BU of 8xb4 by Molmil
Structure of apo state of the human Norepinephrine Transporter
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GFP-MBP-solute carrier family 6 member 2
Authors:Wu, J.X, Ji, W.M.
Deposit date:2023-12-05
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Structural mechanism of substrate binding and inhibition of the human Norepinephrine Transporter
To Be Published
1HN9
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BU of 1hn9 by Molmil
CRYSTAL STRUCTURE OF BETA-KETOACYL-ACP SYNTHASE III
Descriptor: BETA-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III, PHOSPHATE ION
Authors:Qiu, X, Janson, C.A, Konstantinidis, A.K, Nwagwu, S, Silverman, C, Smith, W.W, Khandekar, S.K, Lonsdale, J, Abdel-Meguid, S.S.
Deposit date:2000-12-07
Release date:2000-12-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of beta-ketoacyl-acyl carrier protein synthase III. A key condensing enzyme in bacterial fatty acid biosynthesis.
J.Biol.Chem., 274, 1999
4V0T
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BU of 4v0t by Molmil
Monomeric pseudorabies virus protease pUL26N at 2.1 A resolution
Descriptor: UL26
Authors:Zuehlsdorf, M, Werten, S, Palm, G.J, Hinrichs, W.
Deposit date:2014-09-18
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dimerization-Induced Allosteric Changes of the Oxyanion-Hole Loop Activate the Pseudorabies Virus Assemblin Pul26N, a Herpesvirus Serine Protease
Plos Pathog., 11, 2015
8YF7
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BU of 8yf7 by Molmil
Cryo-EM structure of Dragon Grouper nervous necrosis virus-like particle at pH6.5 (2.82A)
Descriptor: CALCIUM ION, Capsid protein alpha
Authors:Wang, C.H, Chang, W.H.
Deposit date:2024-02-24
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Molecular Mechanism of pH-Induced Protrusion Configuration Switching in Piscine Betanodavirus Implies a Novel Antiviral Strategy.
Acs Infect Dis., 2024
8VJ5
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BU of 8vj5 by Molmil
Peroxide-Soaked MnSOD
Descriptor: HYDROGEN PEROXIDE, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Azadmanesh, J, Slobodnik, K, Struble, L.R, Lutz, W.E, Weiss, K.L, Myles, D.A.A, Kroll, T, Borgstahl, G.E.O.
Deposit date:2024-01-05
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Revealing the atomic and electronic mechanism of human manganese superoxide dismutase product inhibition.
Biorxiv, 2024
9B94
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BU of 9b94 by Molmil
Cryo-EM structure of the E396A mutant of human TRPM4 in complex with calcium at 37 degrees Celsius
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9BOR
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BU of 9bor by Molmil
IkappaBzeta ankyrin repeat domain:NF-kappaB p50 homodimer complex at 2.0 Angstrom resolution
Descriptor: (2R,3S)-heptane-1,2,3-triol, NF-kappa-B inhibitor zeta, Nuclear factor NF-kappa-B p50 subunit
Authors:Rogers, W.E, Zhu, N, Huxford, T.
Deposit date:2024-05-05
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Structural and biochemical analyses of the nuclear I kappa B zeta protein in complex with the NF-kappa B p50 homodimer.
Genes Dev., 38, 2024
8VJR
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BU of 8vjr by Molmil
Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18, DTT-treated
Descriptor: Capsid protein
Authors:Sun, C, Jiang, W.
Deposit date:2024-01-07
Release date:2024-02-07
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:The 2.6 angstrom Structure of a Tulane Virus Variant with Minor Mutations Leading to Receptor Change.
Biomolecules, 14, 2024
8X2R
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BU of 8x2r by Molmil
The Crystal Structure of HSP 90-alpha from Biortus.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Heat shock protein HSP 90-alpha
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
Deposit date:2023-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Crystal Structure of HSP 90-alpha from Biortus.
To Be Published
8VI4
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BU of 8vi4 by Molmil
TehA from Haemophilus influenzae purified in LMNG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8XI8
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BU of 8xi8 by Molmil
The Crystal Structure of TAB1 from Biortus.
Descriptor: TGF-beta-activated kinase 1 and MAP3K7-binding protein 1
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Bao, C.
Deposit date:2023-12-19
Release date:2024-03-06
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:The Crystal Structure of TAB1 from Biortus.
To Be Published
8XBE
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BU of 8xbe by Molmil
Human GPR34 -Gi complex bound to S3E-LysoPS
Descriptor: (2~{S})-2-azanyl-3-[[(2~{R})-1-ethoxy-3-[(~{Z})-octadec-9-enoyl]oxy-propan-2-yl]oxy-oxidanyl-phosphoryl]oxy-propanoic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Kawahara, R, Shihoya, W, Nureki, O.
Deposit date:2023-12-06
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for lysophosphatidylserine recognition by GPR34.
Nat Commun, 15, 2024
9ATJ
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BU of 9atj by Molmil
Crystal structure of MERS 3CL protease in complex with a m-chlorobenzyl 2-pyrrolidone inhibitor
Descriptor: (1R,2S)-2-({N-[({(2S)-1-[(3-chlorophenyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-({N-[({(2S)-1-[(3-chlorophenyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5, ...
Authors:Liu, L, Lovell, S, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
Deposit date:2024-02-26
Release date:2024-07-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
J.Med.Chem., 67, 2024
8X2S
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BU of 8x2s by Molmil
The Crystal Structure of BPGM from Biortus
Descriptor: 1,2-ETHANEDIOL, Bisphosphoglycerate mutase
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Li, J.
Deposit date:2023-11-10
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of BPGM from Biortus
To Be Published
8XPN
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The Crystal Structure of USP8 from Biortus.
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ubiquitin carboxyl-terminal hydrolase 8, ...
Authors:Wang, F, Cheng, W, Yuan, Z, Lin, D, Wang, J.
Deposit date:2024-01-04
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of USP8 from Biortus.
To Be Published
8VE3
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BU of 8ve3 by Molmil
Unliganded human transthyretin in the compressed conformation
Descriptor: Transthyretin
Authors:Basanta, B, Nugroho, K, Yan, N, Kline, G.M, Tsai, F.J, Wu, M, Kelly, J.W, Lander, G.C.
Deposit date:2023-12-18
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The conformational landscape of human transthyretin revealed by cryo-EM
To Be Published

224004

PDB entries from 2024-08-21

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