Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34568 results

7UVY
DownloadVisualize
BU of 7uvy by Molmil
A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2022-05-02
Release date:2023-04-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVV
DownloadVisualize
BU of 7uvv by Molmil
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2022-05-02
Release date:2023-04-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
3ZTR
DownloadVisualize
BU of 3ztr by Molmil
Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FIRST STAGE OF RADIATION DAMAGE)
Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
Deposit date:2011-07-12
Release date:2012-03-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus
Proteins, 80, 2012
4XPK
DownloadVisualize
BU of 4xpk by Molmil
The crystal structure of Campylobacter jejuni N-acetyltransferase PseH
Descriptor: N-Acetyltransferase, PseH
Authors:Song, W.S, Nam, M.S, Namgung, B, Yoon, S.I.
Deposit date:2015-01-17
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of PseH, the Campylobacter jejuni N-acetyltransferase involved in bacterial O-linked glycosylation.
Biochem.Biophys.Res.Commun., 458, 2015
4XL3
DownloadVisualize
BU of 4xl3 by Molmil
Crystal structure of reduced form of thiolase from Clostridium acetobutylicum
Descriptor: Acetyl-CoA acetyltransferase, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
2CLS
DownloadVisualize
BU of 2cls by Molmil
The crystal structure of the human RND1 GTPase in the active GTP bound state
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RHO-RELATED GTP-BINDING PROTEIN RHO6
Authors:Pike, A.C.W, Yang, X, Colebrook, S, Gileadi, O, Sobott, F, Bray, J, Wen Hwa, L, Marsden, B, Zhao, Y, Schoch, G, Elkins, J, Debreczeni, J.E, Turnbull, A.P, von Delft, F, Arrowsmith, C, Edwards, A, Weigelt, J, Sundstrom, M, Doyle, D.
Deposit date:2006-04-28
Release date:2006-05-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The Crystal Structure of the Human Rnd1 Gtpase in the Active GTP Bound State
To be Published
5M3K
DownloadVisualize
BU of 5m3k by Molmil
A multi-component acyltransferase PhlABC from Pseudomonas protegens
Descriptor: 2,4-diacetylphloroglucinol biosynthesis protein PhlB, 2,4-diacetylphloroglucinol biosynthesis protein PhlC, PhlA, ...
Authors:Pavkov-Keller, T, Schmidt, N.G, Kroutil, W, Gruber, K.
Deposit date:2016-10-15
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structure and Catalytic Mechanism of a Bacterial Friedel-Crafts Acylase.
Chembiochem, 20, 2019
4XLX
DownloadVisualize
BU of 4xlx by Molmil
Crystal structure of BjKS from Bradyrhizobium japonicum
Descriptor: Uncharacterized protein blr2150
Authors:Hu, Y, Zheng, Y, Ko, T.P, Liu, W, Guo, R.T.
Deposit date:2015-01-14
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum.
Sci Rep, 4, 2014
5M2N
DownloadVisualize
BU of 5m2n by Molmil
Crystal Structure of Elongator subunit Elp2
Descriptor: Elongator complex protein 2
Authors:Glatt, S, Mueller, C.W.
Deposit date:2016-10-13
Release date:2016-12-28
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.812 Å)
Cite:Architecture of the yeast Elongator complex.
EMBO Rep., 18, 2017
4J4R
DownloadVisualize
BU of 4j4r by Molmil
Hexameric SFTSVN
Descriptor: Nucleocapsid protein
Authors:Jiao, L, Ouyang, S, Liang, M, Niu, F, Shaw, N, Wu, W, Ding, W, Jin, C, Zhu, Y, Zhang, F, Wang, T, Li, C, Zuo, X, Luan, C.H, Li, D, Liu, Z.J.
Deposit date:2013-02-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of severe Fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential
J.Virol., 87, 2013
2C9S
DownloadVisualize
BU of 2c9s by Molmil
1.24 Angstroms resolution structure of Zn-Zn Human Superoxide dismutase
Descriptor: ACETATE ION, SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ...
Authors:Strange, R.W, Antonyuk, S.V, Hough, M.A, Doucette, P.A, Valentine S, J.S, Hasnain, S.
Deposit date:2005-12-14
Release date:2005-12-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Variable Metallation of Human Superoxide Dismutase: Atomic Resolution Crystal Structures of Cu-Zn, Zn-Zn and as-Isolated Wild-Type Enzymes.
J.Mol.Biol., 356, 2006
1HP0
DownloadVisualize
BU of 1hp0 by Molmil
CRYSTAL STRUCTURE OF AN INOSINE-ADENOSINE-GUANOSINE-PREFERRING NUCLEOSIDE HYDROLASE FROM TRYPANOSOMA VIVAX IN COMPLEX WITH THE SUBSTRATE ANALOGUE 3-DEAZA-ADENOSINE
Descriptor: 3-DEAZA-ADENOSINE, CALCIUM ION, INOSINE-ADENOSINE-GUANOSINE-PREFERRING NUCLEOSIDE HYDROLASE
Authors:Versees, W, Decanniere, K, Pelle, R, Depoorter, J, Parkin, D.W, Steyaert, J.
Deposit date:2000-12-12
Release date:2001-12-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and function of a novel purine specific nucleoside hydrolase from Trypanosoma vivax.
J.Mol.Biol., 307, 2001
5TW9
DownloadVisualize
BU of 5tw9 by Molmil
1.50 Angstrom Crystal Structure of C-terminal Fragment (residues 322-384) of Iron Uptake System Component EfeO from Yersinia pestis.
Descriptor: 1,2-ETHANEDIOL, IODIDE ION, Iron uptake system component EfeO
Authors:Minasov, G, Shuvalova, L, Flores, K, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-11-11
Release date:2016-11-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.50 Angstrom Crystal Structure of C-terminal Fragment (residues 322-384) of Iron Uptake System Component EfeO from Yersinia pestis.
To Be Published
5MPE
DownloadVisualize
BU of 5mpe by Molmil
26S proteasome in presence of ATP (s2)
Descriptor: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit RPN1, 26S proteasome regulatory subunit RPN10, ...
Authors:Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E.
Deposit date:2016-12-16
Release date:2017-03-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into the functional cycle of the ATPase module of the 26S proteasome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MCY
DownloadVisualize
BU of 5mcy by Molmil
The structure of the mature HIV-1 CA pentamer in intact virus particles
Descriptor: Capsid protein p24
Authors:Mattei, S, Glass, B, Hagen, W.J.H, Kraeusslich, H.-G, Briggs, J.A.G.
Deposit date:2016-11-10
Release date:2016-12-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The structure and flexibility of conical HIV-1 capsids determined within intact virions.
Science, 354, 2016
2FZ2
DownloadVisualize
BU of 2fz2 by Molmil
Structure of Turnip Yellow Mosaic Virus at 100 K
Descriptor: 5'-R(*CP*CP*C)-3', Coat protein
Authors:Larson, S.B, Lucas, R.W, McPherson, A.
Deposit date:2006-02-08
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The RNA of turnip yellow mosaic virus exhibits icosahedral order.
Virology, 334, 2005
4XSP
DownloadVisualize
BU of 4xsp by Molmil
Crystal structure of Anabaena Alr3699/HepE in complex with UDP
Descriptor: Alr3699 protein, GLYCEROL, URIDINE-5'-DIPHOSPHATE
Authors:Wang, X.P, Dai, Y.N, Jiang, Y.L, Cheng, W, Chen, Y.X, Zhou, C.Z.
Deposit date:2015-01-22
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and enzymatic analyses of a glucosyltransferase Alr3699/HepE involved in Anabaena heterocyst envelop polysaccharide biosynthesis
Glycobiology, 26, 2016
1HTV
DownloadVisualize
BU of 1htv by Molmil
CRYSTAL STRUCTURE OF DESTRIPEPTIDE (B28-B30) INSULIN
Descriptor: INSULIN, ZINC ION
Authors:Ye, J, Chang, W, Liang, D.
Deposit date:2001-01-01
Release date:2001-05-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of destripeptide (B28-B30) insulin: implications for insulin dissociation.
Biochim.Biophys.Acta, 1547, 2001
1HU5
DownloadVisualize
BU of 1hu5 by Molmil
SOLUTION STRUCTURE OF OVISPIRIN-1
Descriptor: OVISPIRIN-1
Authors:Sawai, M.V, Waring, A.J, Kearney, W.R, McCray Jr, P.B, Forsyth, W.R, Lehrer, R.I, Tack, B.F.
Deposit date:2001-01-04
Release date:2002-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Impact of single-residue mutations on the structure and function of ovispirin/novispirin antimicrobial peptides.
Protein Eng., 15, 2002
4XSR
DownloadVisualize
BU of 4xsr by Molmil
Crystal structure of Anabaena Alr3699/HepE in complex with UDP-glucose
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Alr3699 protein, SULFATE ION, ...
Authors:Wang, X.P, Dai, Y.N, Jiang, Y.L, Cheng, W, Chen, Y.X, Zhou, C.Z.
Deposit date:2015-01-22
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural and enzymatic analyses of a glucosyltransferase Alr3699/HepE involved in Anabaena heterocyst envelop polysaccharide biosynthesis
Glycobiology, 26, 2016
4IQB
DownloadVisualize
BU of 4iqb by Molmil
High Resolution Crystal Structure of C.elegans Thymidylate Synthase
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W.
Deposit date:2013-01-11
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS.
J. Mol. Graph. Model., 77, 2017
2FZ1
DownloadVisualize
BU of 2fz1 by Molmil
Structure of Empty Head Turnip Yellow Mosaic Virus (ATC) at 100 K
Descriptor: Coat protein
Authors:Larson, S.B, Lucas, R.W, McPherson, A.
Deposit date:2006-02-08
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The RNA of turnip yellow mosaic virus exhibits icosahedral order.
Virology, 334, 2005
4J4S
DownloadVisualize
BU of 4j4s by Molmil
Triple mutant SFTAVN
Descriptor: Nucleocapsid protein, SODIUM ION
Authors:Jiao, L, Ouyang, S, Liang, M, Niu, F, Shaw, N, Wu, W, Ding, W, Jin, C, Zhu, Y, Zhang, F, Wang, T, Li, C, Zuo, X, Luan, C.H, Li, D, Liu, Z.J.
Deposit date:2013-02-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.442 Å)
Cite:Structure of severe Fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential
J.Virol., 87, 2013
4XVQ
DownloadVisualize
BU of 4xvq by Molmil
H-Ras Y137E
Descriptor: GLYCEROL, GTPase HRas, MAGNESIUM ION, ...
Authors:Johnson, C.W, Mattos, C.
Deposit date:2015-01-27
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Tyrosine phosphorylation of RAS by ABL allosterically enhances effector binding.
Faseb J., 29, 2015
4XX5
DownloadVisualize
BU of 4xx5 by Molmil
Structure of PI3K gamma in complex with an inhibitor
Descriptor: N-[5-(5-methoxypyridin-3-yl)-4,5,6,7-tetrahydro[1,3]thiazolo[5,4-c]pyridin-2-yl]acetamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Collier, P.N, Messersmith, D, Le Tiran, A, Bandarage, U.K, Boucher, C, Come, J, Cottrell, K.M, Damagnez, V, Doran, J.D, Griffith, J.P, Khare-Pandit, S, Krueger, E.B, Ledeboer, M.W, Ledford, B, Liao, Y, Mahajan, S, Moody, C.S, Wang, T, Xu, J, Aronov, A.M.
Deposit date:2015-01-29
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structure of PI3K gamma in complex with an inhibitor
To Be Published

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon