Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34447 results

4P5B
DownloadVisualize
BU of 4p5b by Molmil
Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi bound with 5-Br dUMP
Descriptor: 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Li, Y, Chen, W, Li, J, Xia, Z, Deng, Z, Zhou, J.
Deposit date:2014-03-15
Release date:2015-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.274 Å)
Cite:Crystal structure of a UMP/dUMP methylase PolB form Streptomyces cacaoi bound with 5-Br dUMP
To Be Published
7D18
DownloadVisualize
BU of 7d18 by Molmil
Crystal structure of Acidobacteriales bacterium glutaminyl cyclase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Peptidase M28, ...
Authors:Huang, K.-F, Huang, J.-S, Wu, M.-L, Hsieh, W.-L, Wang, A.H.-J.
Deposit date:2020-09-14
Release date:2021-04-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.332 Å)
Cite:A Unique Carboxylic-Acid Hydrogen-Bond Network (CAHBN) Confers Glutaminyl Cyclase Activity on M28 Family Enzymes.
J.Mol.Biol., 433, 2021
2GIC
DownloadVisualize
BU of 2gic by Molmil
Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex
Descriptor: 45-MER, Nucleocapsid protein, URANYL (VI) ION
Authors:Green, T.J, Zhang, X, Wertz, G.W, Luo, M.
Deposit date:2006-03-28
Release date:2006-08-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Structure of the vesicular stomatitis virus nucleoprotein-RNA complex unveils how the RNA is sequestered
Science, 313, 2006
7D2D
DownloadVisualize
BU of 7d2d by Molmil
Crystal structure of Ixodes scapularis glutaminyl cyclase with a Mn ion bound to the active site
Descriptor: Glutaminyl-peptide cyclotransferase, MANGANESE (II) ION
Authors:Huang, K.-F, Huang, J.-S, Wu, M.-L, Hsieh, W.-L, Wang, A.H.-J.
Deposit date:2020-09-16
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Unique Carboxylic-Acid Hydrogen-Bond Network (CAHBN) Confers Glutaminyl Cyclase Activity on M28 Family Enzymes.
J.Mol.Biol., 433, 2021
2GE9
DownloadVisualize
BU of 2ge9 by Molmil
Solution Structures of the SH2 domain of Bruton's Tyrosine Kinase
Descriptor: Tyrosine-protein kinase BTK
Authors:Cheng, J.-W, Huang, K.-C.
Deposit date:2006-03-18
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and phosphopeptide binding of the SH2 domain from the human Bruton's tyrosine kinase
J.Biomol.Nmr, 36, 2006
3M5P
DownloadVisualize
BU of 3m5p by Molmil
Glucose-6-phosphate isomerase from Francisella tularensis complexed with fructose-6-phosphate.
Descriptor: 6-O-phosphono-beta-D-fructofuranose, GLYCEROL, Glucose-6-phosphate isomerase, ...
Authors:Osipiuk, J, Maltseva, N, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-03-12
Release date:2010-03-23
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray crystal structure of glucose-6-phosphate isomerase from Francisella tularensis complexed with fructose-6-phosphate.
To be Published
4PAF
DownloadVisualize
BU of 4paf by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND 3,4-DIHYDROXYBENZOATE
Descriptor: 3,4-DIHYDROXYBENZOIC ACID, MALONATE ION, TRAP dicarboxylate transporter, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-08
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4PBH
DownloadVisualize
BU of 4pbh by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND BENZOIC ACID
Descriptor: BENZOIC ACID, TRAP dicarboxylate transporter, DctP subunit, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-12
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4PDD
DownloadVisualize
BU of 4pdd by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM POLAROMONAS SP JS666 (Bpro_0088, TARGET EFI-510167) BOUND TO D-ERYTHRONATE
Descriptor: (2R,3R)-2,3,4-trihydroxybutanoic acid, FORMIC ACID, MALONIC ACID, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-18
Release date:2014-05-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
2G6J
DownloadVisualize
BU of 2g6j by Molmil
Structure of rat nNOS (L337N) heme domain (4-aminobiopterin bound) complexed with NO
Descriptor: (1S,2S)-1-(2,4-DIAMINOPTERIDIN-6-YL)PROPANE-1,2-DIOL, ACETATE ION, ARGININE, ...
Authors:Li, H, Igarashi, J, Jamal, J, Yang, W, Poulos, T.L.
Deposit date:2006-02-24
Release date:2006-08-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural studies of constitutive nitric oxide synthases with diatomic ligands bound.
J.Biol.Inorg.Chem., 11, 2006
3MBU
DownloadVisualize
BU of 3mbu by Molmil
Structure of a bipyridine-modified PNA duplex
Descriptor: 1,2-ETHANEDIOL, Bipyridine-PNA, CARBONATE ION, ...
Authors:Yeh, J.I, Pohl, E, Truan, D, He, W, Sheldrick, G.M, Du, S, Achim, C.
Deposit date:2010-03-26
Release date:2011-03-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:The crystal structure of non-modified and bipyridine-modified PNA duplexes.
Chemistry, 16, 2010
2G3A
DownloadVisualize
BU of 2g3a by Molmil
Crystal structure of putative acetyltransferase from Agrobacterium tumefaciens
Descriptor: acetyltransferase
Authors:Cymborowski, M, Xu, X, Chruszcz, M, Zheng, H, Gu, J, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-02-17
Release date:2006-03-14
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of putative acetyltransferase from Agrobacterium tumefaciens
To be Published
3M78
DownloadVisualize
BU of 3m78 by Molmil
Crystal Structure of Plant SLAC1 homolog TehA
Descriptor: Tellurite resistance protein tehA homolog, octyl beta-D-glucopyranoside
Authors:Chen, Y.-H, Hendrickson, W.A, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2010-03-16
Release date:2010-05-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Plant SLAC1 homolog TehA
To be Published
4PF8
DownloadVisualize
BU of 4pf8 by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SULFITOBACTER sp. NAS-14.1 (TARGET EFI-510299) WITH BOUND BETA-D-GALACTURONATE
Descriptor: CHLORIDE ION, TRAP-T family transporter, DctP (Periplasmic binding) subunit, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-28
Release date:2014-05-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
2G44
DownloadVisualize
BU of 2g44 by Molmil
Human Estrogen Receptor Alpha Ligand-Binding Domain In Complex With OBCP-1M-G and A Glucocorticoid Receptor Interacting Protein 1 NR Box II Peptide
Descriptor: 4-[(1S,2R,5S)-4,4,8-TRIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2006-02-21
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery and characterization of novel estrogen receptor agonist ligands and development of biochips for nuclear receptor drug discovery
Thesis, 2006
3MDB
DownloadVisualize
BU of 3mdb by Molmil
Crystal structure of the ternary complex of full length centaurin alpha-1, KIF13B FHA domain, and IP4
Descriptor: (2R)-3-{[(R)-{[(1S,2S,3R,4S,5S,6S)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}propane -1,2-diyl dioctanoate, Arf-GAP with dual PH domain-containing protein 1, Kinesin-like protein KIF13B, ...
Authors:Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-03-30
Release date:2010-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.952 Å)
Cite:Crystal structure of the ternary complex of full length centaurin alpha-1, KIF13B FHA domain, and IP4
to be published
2G9K
DownloadVisualize
BU of 2g9k by Molmil
Human Transthyretin (TTR) Complexed with Hydroxylated polychlorinated Biphenyl-4-hydroxy-2',3,3',4',5-Pentachlorobiphenyl
Descriptor: 2',3,3',4',5-PENTACHLOROBIPHENYL-4-OL, Transthyretin
Authors:Palaninathan, S.K, Smith, C, Safe, S.H, Kelly, J.W, Sacchettini, J.C.
Deposit date:2006-03-06
Release date:2006-03-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Hydroxylated polychlorinated biphenyls selectively bind transthyretin in blood and inhibit amyloidogenesis: rationalizing rodent PCB toxicity
Chem.Biol., 11, 2004
3MA0
DownloadVisualize
BU of 3ma0 by Molmil
Closed liganded crystal structure of xylose binding protein from Escherichia coli
Descriptor: D-xylose-binding periplasmic protein, beta-D-xylopyranose
Authors:Sooriyaarachchi, S, Ubhayasekera, W, Mowbray, S.L.
Deposit date:2010-03-23
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational changes and ligand recognition of Escherichia coli D-xylose binding protein revealed
J.Mol.Biol., 402, 2010
3MF8
DownloadVisualize
BU of 3mf8 by Molmil
Crystal Structure of Native cis-CaaD
Descriptor: Cis-3-chloroacrylic acid dehalogenase, SULFATE ION
Authors:Guo, Y, Serrano, H, Ernst, S.R, Johnson Jr, W.H, Hackert, M.L, Whitman, C.P.
Deposit date:2010-04-01
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structures of native and inactivated cis-3-chloroacrylic acid dehalogenase: Implications for the catalytic and inactivation mechanisms.
Bioorg.Chem., 39, 2011
4PGR
DownloadVisualize
BU of 4pgr by Molmil
Crystal structure of YetJ from Bacillus Subtilis at pH 8
Descriptor: Uncharacterized protein YetJ
Authors:Liu, Q, Chang, Y, Hendrickson, W.A, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-05-02
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for a pH-sensitive calcium leak across membranes.
Science, 344, 2014
4PN9
DownloadVisualize
BU of 4pn9 by Molmil
A de novo designed hexameric coiled coil CC-Hex2
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CC-Hex2
Authors:Wood, C.W, Burton, A.J, Thomson, A.R, Brady, R.L, Woolfson, D.N.
Deposit date:2014-05-23
Release date:2014-10-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Computational design of water-soluble alpha-helical barrels.
Science, 346, 2014
4PP6
DownloadVisualize
BU of 4pp6 by Molmil
Crystal Structure of the Estrogen Receptor alpha Ligand-binding Domain in Complex with Resveratrol
Descriptor: Estrogen receptor, Nuclear receptor coactivator 2, RESVERATROL
Authors:Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Parent, A.A, Hughes, T.S, Pollock, J.A, Gjyshi, O, Cavett, V, Nowak, J, Garcia-Ordonez, R.D, Houtman, R, Griffin, P.R, Kojetin, D.J, Katzenellenbogen, J.A, Conkright, M.D, Nettles, K.W.
Deposit date:2014-02-26
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Resveratrol modulates the inflammatory response via an estrogen receptor-signal integration network.
Elife, 3, 2014
4PS5
DownloadVisualize
BU of 4ps5 by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with TG101348
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Bromodomain-containing protein 4, ...
Authors:Ember, S.W, Zhu, J.-Y, Watts, C, Schonbrunn, E.
Deposit date:2014-03-06
Release date:2014-03-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors.
Acs Chem.Biol., 9, 2014
4PQD
DownloadVisualize
BU of 4pqd by Molmil
The longer crystal structure of the grow factor like domain from Beta amypoid precusor protein (APP22-126)
Descriptor: Amyloid beta A4 protein
Authors:Tan, X, Li, W, Wang, Z.
Deposit date:2014-03-02
Release date:2015-04-08
Method:X-RAY DIFFRACTION (1.332 Å)
Cite:Mapping the interaction betwwen APP and DR6
To be Published
2GEC
DownloadVisualize
BU of 2gec by Molmil
Structure of the N-terminal domain of avian infectious bronchitis virus nucleocapsid protein (strain Gray) in a novel dimeric arrangement
Descriptor: Nucleocapsid protein
Authors:Jayaram, H, Fan, H, Bowman, B.R, Ooi, A, Jayaram, J, Collisson, E.W, Lescar, J, Prasad, B.V.
Deposit date:2006-03-19
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:X-ray structures of the N- and C-terminal domains of a coronavirus nucleocapsid protein: implications for nucleocapsid formation.
J.Virol., 80, 2006

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon