Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34840 results

5ZWK
DownloadVisualize
BU of 5zwk by Molmil
Crystal structure of Human liver fructose-1,6-bisphoaphatase complex with fructose-1,6-bisphophate and AMP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, Fructose-1,6-bisphosphatase 1, ...
Authors:Yunyuan, H, Zeyuan, G, Junjie, Y, Ping, Y, Jian, W.
Deposit date:2018-05-15
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Location of FBPase catalytic metal binding site: a combined experimental and theoretical study
To Be Published
3DMI
DownloadVisualize
BU of 3dmi by Molmil
Crystallization and Structural Analysis of Cytochrome c6 from the Diatom Phaeodactylum tricornutum at 1.5 A resolution
Descriptor: HEME C, MAGNESIUM ION, cytochrome c6
Authors:Akazaki, H, Kawai, F, Hosokawa, M, Hama, T, Hirano, T, Lim, B.-K, Sakurai, N, Hakamata, W, Park, S.-Y, Nishio, T, Oku, T.
Deposit date:2008-07-01
Release date:2009-03-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallization and structural analysis of cytochrome c(6) from the diatom Phaeodactylum tricornutum at 1.5 A resolution.
Biosci.Biotechnol.Biochem., 73, 2009
4KCB
DownloadVisualize
BU of 4kcb by Molmil
Crystal Structure of Exo-1,5-alpha-L-arabinanase from Bovine Ruminal Metagenomic Library
Descriptor: Arabinan endo-1,5-alpha-L-arabinosidase, PHOSPHATE ION
Authors:Santos, C.R, Polo, C.C, Costa, M.C.M.F, Nascimento, A.F.Z, Wong, D.W.S, Murakami, M.T.
Deposit date:2013-04-24
Release date:2014-02-05
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases.
J.Biol.Chem., 289, 2014
3DR6
DownloadVisualize
BU of 3dr6 by Molmil
Structure of yncA, a putative ACETYLTRANSFERASE from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, yncA
Authors:Singer, A.U, Skarina, T, Onopriyenko, O, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-07-10
Release date:2008-09-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Funded by the national institute of allergy and infectious diseases of nih (contract number hhsn272200700058c).
To be Published
4KL1
DownloadVisualize
BU of 4kl1 by Molmil
HCN4 CNBD in complex with cGMP
Descriptor: ACETATE ION, CYCLIC GUANOSINE MONOPHOSPHATE, GLYCEROL, ...
Authors:Lolicato, M, Arrigoni, C, Zucca, S, Nardini, M, Bucchi, A, Schroeder, I, Simmons, K, Bolognesi, M, DiFrancesco, D, Schwede, F, Fishwick, C.W.G, Johnson, A.P.K, Thiel, G, Moroni, A.
Deposit date:2013-05-07
Release date:2014-04-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cyclic dinucleotides bind the C-linker of HCN4 to control channel cAMP responsiveness.
Nat.Chem.Biol., 10, 2014
4KLZ
DownloadVisualize
BU of 4klz by Molmil
Inhibition of Small GTPases by Stabilization of the GDP Complex, a Novel Approach applied to Rit1, a Target for Rheumatoid Arthritis
Descriptor: GTP-binding protein Rit1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Shah, D.M, Kobayashi, M, Keizers, P.H, Tuin, A.W, Ab, E, Manning, L, Rzepiela, A.A, Andrews, M, Hoedemaeker, F.J, Siegal, G.
Deposit date:2013-05-07
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibition of Small GTPases by Stabilization of the GDP Complex, a Novel Approach applied to Rit1, a Target for Rheumatoid Arthritis
To be Published
3DXM
DownloadVisualize
BU of 3dxm by Molmil
Structure of Bos taurus Arp2/3 Complex with Bound Inhibitor CK0993548
Descriptor: (2S)-2-(3-bromophenyl)-3-(5-chloro-2-hydroxyphenyl)-1,3-thiazolidin-4-one, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1B, ...
Authors:Nolen, B.J, Tomasevic, N, Russell, A, Pierce, D.W, Jia, Z, Hartman, J, Sakowicz, R, Pollard, T.D.
Deposit date:2008-07-24
Release date:2009-07-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Characterization of two classes of small molecule inhibitors of Arp2/3 complex
Nature, 460, 2009
3DZ8
DownloadVisualize
BU of 3dz8 by Molmil
Crystal structure of human Rab3B GTPase bound with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-3B, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tong, Y, Sukumar, D, Tempel, W, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-07-29
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human Rab3B GTPase bound with GDP
To be Published
3DAX
DownloadVisualize
BU of 3dax by Molmil
Crystal structure of human CYP7A1
Descriptor: Cytochrome P450 7A1, PROTOPORPHYRIN IX CONTAINING FE, UNKNOWN ATOM OR ION
Authors:Strushkevich, N.V, Tempel, W, Dombrovski, L, Dong, A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-05-30
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of human CYP7A1
To be Published
3DDX
DownloadVisualize
BU of 3ddx by Molmil
HK97 bacteriophage capsid Expansion Intermediate-II model
Descriptor: Major capsid protein
Authors:Lee, K.K, Gan, L, Conway, J.F, Hendrix, R.W, Steven, A.C, Johnson, J.E.
Deposit date:2008-06-06
Release date:2008-11-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY
Cite:Virus capsid expansion driven by the capture of mobile surface loops.
Structure, 16, 2008
4KF4
DownloadVisualize
BU of 4kf4 by Molmil
Crystal Structure of sfCherry
Descriptor: fluorescent protein sfCherry
Authors:Nguyen, H.B, Hung, L.-W, Yeates, T.O, Waldo, G.S, Terwilliger, T.C.
Deposit date:2013-04-26
Release date:2013-12-18
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Split green fluorescent protein as a modular binding partner for protein crystallization.
Acta Crystallogr.,Sect.D, 69, 2013
4KGT
DownloadVisualize
BU of 4kgt by Molmil
Backbone Modifications in the Protein GB1 Turns: Aib10, D-Pro47
Descriptor: Streptococcal Protein GB1 Backbone Modified Variant: Aib10, D-Pro47
Authors:Reinert, Z.E, Lengyel, G.A, Horne, W.S.
Deposit date:2013-04-29
Release date:2013-09-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein-like Tertiary Folding Behavior from Heterogeneous Backbones.
J.Am.Chem.Soc., 135, 2013
8GY6
DownloadVisualize
BU of 8gy6 by Molmil
Structure of SARS-CoV-2 RNA-dependent RNA polymerase with gossypol binding
Descriptor: Gossypol, Non-structural protein 7, Non-structural protein 8, ...
Authors:Wang, W, Ren, M, Li, F.
Deposit date:2022-09-21
Release date:2023-11-01
Method:ELECTRON MICROSCOPY
Cite:Structure of SARS-CoV-2 RNA-dependent RNA polymerase with gossypol binding
To Be Published
4WD8
DownloadVisualize
BU of 4wd8 by Molmil
Crystal structure of a bacterial Bestrophin homolog from Klebsiella pneumoniae
Descriptor: Bestrophin domain protein, ZINC ION
Authors:Yang, T, Liu, Q, Hendrickson, W.A, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-09-08
Release date:2014-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and selectivity in bestrophin ion channels.
Science, 346, 2014
8HCG
DownloadVisualize
BU of 8hcg by Molmil
Crystal structure of mTREX1-dAMP complex
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Hsiao, Y.Y, Huang, K.W, Wu, C.Y.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Molecular insight into the specific enzymatic properties of TREX1 revealing the diverse functions in processing RNA and DNA/RNA hybrids.
Nucleic Acids Res., 51, 2023
4V4U
DownloadVisualize
BU of 4v4u by Molmil
The quasi-atomic model of Human Adenovirus type 5 capsid
Descriptor: HEXON PROTEIN, N-TERMINAL PEPTIDE OF FIBER PROTEIN, PENTON PROTEIN
Authors:Fabry, C.M.S, Rosa-Calatrava, M, Conway, J.F, Zubieta, C, Cusack, S, Ruigrok, R.W.H, Schoehn, G.
Deposit date:2005-03-03
Release date:2014-07-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10 Å)
Cite:A Quasi-Atomic Model of Human Adenovirus Type 5 Capsid.
Embo J., 24, 2005
8HP0
DownloadVisualize
BU of 8hp0 by Molmil
Crystal structure of meso-diaminopimelate dehydrogenase from Prevotella timonensis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Meso-diaminopimelate D-dehydrogenase, SULFATE ION
Authors:Tan, Y, Song, W.
Deposit date:2022-12-11
Release date:2023-12-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Rational Design of Meso -Diaminopimelate Dehydrogenase with Enhanced Reductive Amination Activity for Efficient Production of d- p -Hydroxyphenylglycine.
Appl.Environ.Microbiol., 89, 2023
8HQT
DownloadVisualize
BU of 8hqt by Molmil
The complex structure of COPI cargo sorting module with SARS-CoV-2 Spike KxHxx sorting motif
Descriptor: Coatomer subunit beta', SARS-CoV-2 Spike KxHxx motif
Authors:Ma, W.F, Nan, Y.N, Yang, M.R, Li, Y.Q.
Deposit date:2022-12-14
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tighter ER retention of SARS-CoV-2 Omicron spike caused by a constellation of folding disruptive mutations
To Be Published
8HRU
DownloadVisualize
BU of 8hru by Molmil
Cryo-EM structure of ACE2
Descriptor: Angiotensin-converting enzyme 2
Authors:Xu, J, Liu, N, Wang, H.W.
Deposit date:2022-12-16
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of ACE2
To Be Published
8HRI
DownloadVisualize
BU of 8hri by Molmil
SARS-CoV-2 Delta variant spike protein
Descriptor: Spike glycoprotein
Authors:Xu, J, Cheng, H, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
8HRZ
DownloadVisualize
BU of 8hrz by Molmil
Crystal structure of the p97-N/D1 hexamer in complex with six p47-UBX domains
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NSFL1 cofactor p47, Transitional endoplasmic reticulum ATPase
Authors:Nguyen, T.Q, Kang, W.
Deposit date:2022-12-16
Release date:2023-12-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the p97-N/D1 hexmaer in complex with six p47-UBX domains
J. Korean Chem. Soc., 68, 2024
6AAE
DownloadVisualize
BU of 6aae by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136
Descriptor: DI(HYDROXYETHYL)ETHER, Esterase, PENTAETHYLENE GLYCOL
Authors:Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
Deposit date:2018-07-18
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
8HRM
DownloadVisualize
BU of 8hrm by Molmil
Cryo-EM structure of streptavidin
Descriptor: Streptavidin
Authors:Xu, J, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
8HQW
DownloadVisualize
BU of 8hqw by Molmil
The complex structure of COPI cargo sorting module with MHV Spike Hxx sorting motif
Descriptor: Coatomer subunit beta',MHV Spike Hxx sorting motif
Authors:Ma, W.F, Nan, Y.N, Yang, M.R, Li, Y.Q.
Deposit date:2022-12-14
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.405 Å)
Cite:Tighter ER retention of SARS-CoV-2 Omicron spike caused by a constellation of folding disruptive mutations
To Be Published
8HRK
DownloadVisualize
BU of 8hrk by Molmil
SARS-CoV-2 Delta S-RBD-ACE2 complex
Descriptor: Processed angiotensin-converting enzyme 2, Spike protein S1
Authors:Xu, J, Meng, F, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published

226262

건을2024-10-16부터공개중

PDB statisticsPDBj update infoContact PDBjnumon