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PDB: 34568 件

8SFQ
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BU of 8sfq by Molmil
WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
To Be Published
7KRV
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BU of 7krv by Molmil
Stimulating state of disulfide-bridged Hsp70 DnaK
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK fused with substrate peptide, MAGNESIUM ION, ...
著者Wang, W, Hendrickson, W.A.
登録日2020-11-20
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Conformational equilibria in allosteric control of Hsp70 chaperones.
Mol.Cell, 81, 2021
7KRT
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BU of 7krt by Molmil
Restraining state of a truncated Hsp70 DnaK
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaK, MAGNESIUM ION
著者Wang, W, Hendrickson, W.A.
登録日2020-11-20
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Conformational equilibria in allosteric control of Hsp70 chaperones.
Mol.Cell, 81, 2021
3NR2
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BU of 3nr2 by Molmil
Crystal structure of Caspase-6 zymogen
分子名称: Caspase-6
著者Su, X.-D, Wang, X.-J, Liu, X, Mi, W, Wang, K.-T.
登録日2010-06-30
公開日2010-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of human caspase 6 reveal a new mechanism for intramolecular cleavage self-activation
Embo Rep., 11, 2010
5C5I
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BU of 5c5i by Molmil
Crystal structure of NADP-dependent dehydrogenase from Rhodobacter sphaeroides
分子名称: NADP-dependent dehydrogenase
著者Kowiel, M, Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Porebski, P.J, Cymborowski, M, Al Obaidi, N.F, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-06-19
公開日2015-07-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of NADP-dependent dehydrogenase from Rhodobacter sphaeroides
to be published
5TA3
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BU of 5ta3 by Molmil
Structure of rabbit RyR1 (Caffeine/ATP/Ca2+ dataset, class 2)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
登録日2016-09-09
公開日2016-10-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
8SFN
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BU of 8sfn by Molmil
WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (30-MER), DNA (31-MER), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
To Be Published
8SFI
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BU of 8sfi by Molmil
WT CRISPR-Cas12a with a 8bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a with a 8bp R-loop
To Be Published
8SFP
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BU of 8sfp by Molmil
WT CRISPR-Cas12a with the target strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (40-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献WT CRISPR-Cas12a with the target strand in the RuvC active site.
To Be Published
8SFH
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BU of 8sfh by Molmil
WT CRISPR-Cas12a with a 5bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (32-MER), RNA (27-MER)
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献WT CRISPR-Cas12a with a 5bp R-loop
To Be Published
5C5S
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BU of 5c5s by Molmil
Crystal Structure of human Myosin 9b RhoGAP domain at 2.2 angstrom
分子名称: Unconventional myosin-IXb
著者Yi, F.S, Ren, J.Q, Feng, W.
登録日2015-06-22
公開日2015-11-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Myo9b is a key player in SLIT/ROBO-mediated lung tumor suppression
J.Clin.Invest., 125, 2015
8SFR
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BU of 8sfr by Molmil
WT CRISPR-Cas12a post nontarget strand cleavage.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a post nontarget strand cleavage.
To Be Published
8FO4
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BU of 8fo4 by Molmil
Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 6-methyl-2-(2-((1E,2E)-3-(2-nitrophenyl)allylidene)hydrazineyl)pyrimidin-4-ol
分子名称: 6-methyl-2-{2-[(1E)-3-(2-nitrophenyl)prop-1-en-1-yl]hydrazinyl}pyrimidin-4(5H)-one, H9 immunoglobulin light chain, PHOSPHATE ION
著者Yan, N.L, Wilson, I.A, Kelly, J.W.
登録日2022-12-29
公開日2023-05-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Diaryl Hydrazone and Sulfone Stabilizers in Complex with an Amyloidogenic Light Chain Reveal an Alternate Ligand-Binding Cavity
Isr.J.Chem., 2023
4I41
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BU of 4i41 by Molmil
Crystal Structure of human Ser/Thr kinase Pim1 in complex with mitoxantrone
分子名称: 1,4-DIHYDROXY-5,8-BIS({2-[(2-HYDROXYETHYL)AMINO]ETHYL}AMINO)-9,10-ANTHRACENEDIONE, Serine/threonine-protein kinase pim-1
著者Zhang, W, Wan, X, Xie, Y, Huang, N.
登録日2012-11-27
公開日2013-12-11
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A new target for an old drug: identifying mitoxantrone as a nanomolar inhibitor of PIM1 kinase via kinome-wide selectivity modeling.
J. Med. Chem., 56, 2013
1DWF
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BU of 1dwf by Molmil
Study on radiation damage on a cryocooled crystal. Part 2: Structure after irradiation with 9.1*10e15 photons/mm2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Burmeister, W.P.
登録日1999-12-05
公開日2000-03-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Changes in a Cryo-Cooled Protein Crystal due to Radiation Damage
Acta Crystallogr.,Sect.D, 56, 2000
2XZE
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BU of 2xze by Molmil
Structural basis for AMSH-ESCRT-III CHMP3 interaction
分子名称: CHARGED MULTIVESICULAR BODY PROTEIN 3, STAM-BINDING PROTEIN
著者Solomons, J, Sabin, C, Weissenhorn, W.
登録日2010-11-25
公開日2011-08-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for Escrt-III Chmp3 Recruitment of Amsh.
Structure, 19, 2011
3M2R
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BU of 3m2r by Molmil
Structural Insight into Methyl-Coenzyme M Reductase Chemistry using Coenzyme B Analogues
分子名称: 1,2-ETHANEDIOL, 1-THIOETHANESULFONIC ACID, Coenzyme B, ...
著者Cedervall, P.E, Dey, M, Ragsdale, S.W, Wilmot, C.M.
登録日2010-03-08
公開日2010-09-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural insight into methyl-coenzyme M reductase chemistry using coenzyme B analogues.
Biochemistry, 49, 2010
2XF0
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BU of 2xf0 by Molmil
Crystal structure of checkpoint kinase 1 (Chk1) in complex with inhibitors
分子名称: 1,2-ETHANEDIOL, 3-PHENYL-6-(1H-PYRAZOL-4-YL)IMIDAZO[1,2-A]PYRAZINE, SERINE/THREONINE-PROTEIN KINASE CHK1
著者Matthews, T.P, McHardy, T, Klair, S, Boxall, K, Fisher, M, Cherry, M, Allen, C.E, Addison, G.J, Ellard, J, Aherne, G.W, Westwood, I.M, van Montfort, R, Garrett, M.D, Reader, J.C, Collins, I.
登録日2010-05-19
公開日2010-06-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design and Evaluation of 3,6-Di(Hetero)Aryl Imidazo[1,2-A]Pyrazines as Inhibitors of Checkpoint and Other Kinases.
Bioorg.Med.Chem.Lett., 20, 2010
3M9K
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BU of 3m9k by Molmil
Crystal structure of human thioredoxin C69/73S double-mutant, oxidized form
分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, SULFATE ION, Thioredoxin
著者Weichsel, A, Montfort, W.R.
登録日2010-03-22
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of human thioredoxin revealing an unraveled helix and exposed S-nitrosation site.
Protein Sci., 19, 2010
5BVT
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BU of 5bvt by Molmil
Palmitate-bound pFABP5
分子名称: Epidermal fatty acid-binding protein, PALMITOLEIC ACID
著者Lee, J.H, Lee, C.W, Do, H.
登録日2015-06-05
公開日2015-08-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
3IR4
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BU of 3ir4 by Molmil
1.2 Angstrom Crystal Structure of the Glutaredoxin 2 (grxB) from Salmonella typhimurium in complex with Glutathione
分子名称: CHLORIDE ION, GLUTATHIONE, Glutaredoxin 2, ...
著者Minasov, G, Wawrzak, Z, Skarina, T, Onopriyenko, O, Peterson, S.N, Halavaty, A, Dauter, Z, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2009-08-21
公開日2009-09-01
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献1.2 Angstrom Crystal Structure of the Glutaredoxin 2 (grxB) from Salmonella typhimurium in complex with Glutathione.
TO BE PUBLISHED
6GG4
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BU of 6gg4 by Molmil
Crystal structure of M2 PYK in complex with Phenyalanine.
分子名称: PHENYLALANINE, PHOSPHATE ION, POTASSIUM ION, ...
著者McNae, I.W, Yuan, M, Walkinshaw, M.D.
登録日2018-05-02
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
5BVS
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BU of 5bvs by Molmil
Linoleate-bound pFABP4
分子名称: Fatty acid-binding protein, LINOLEIC ACID
著者Lee, J.H, Lee, C.W, Do, H.
登録日2015-06-05
公開日2015-08-05
最終更新日2015-09-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the ligand-binding specificity of fatty acid-binding proteins (pFABP4 and pFABP5) in gentoo penguin
Biochem.Biophys.Res.Commun., 465, 2015
6VH3
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BU of 6vh3 by Molmil
2.20 A resolution structure of MERS 3CL protease in complex with inhibitor 7j
分子名称: (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, Orf1a protein
著者Lovell, S, Battaile, K.P, Kashipathy, M.M, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
登録日2020-01-09
公開日2020-08-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
4E2F
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BU of 4e2f by Molmil
Crystal Structure of E. coli Aspartate Transcarbamoylase K164E/E239K Mutant in an intermediate state
分子名称: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, ZINC ION
著者Guo, W, Kantrowitz, E.R.
登録日2012-03-08
公開日2012-05-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Trapping and structure determination of an intermediate in the allosteric transition of aspartate transcarbamoylase.
Proc.Natl.Acad.Sci.USA, 109, 2012

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