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PDB: 34568 件

6XD1
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Dengue serotype 3 RNA-dependent RNA polymerase bound to NITD-640
分子名称: (2R)-4-(butyl{[2'-(1H-tetrazol-5-yl)[1,1'-biphenyl]-4-yl]methyl}carbamoyl)-1-(2,2-diphenylpropanoyl)piperazine-2-carboxylic acid, RNA-dependent RNA polymerase, ZINC ION
著者Arora, R, Benson, T.E, Liew, C.W, Lescar, J.
登録日2020-06-09
公開日2020-09-23
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Two RNA Tunnel Inhibitors Bind in Highly Conserved Sites in Dengue Virus NS5 Polymerase: Structural and Functional Studies.
J.Virol., 94, 2020
6XYQ
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Multiple system atrophy Type II-2 alpha-synuclein filament
分子名称: Alpha-synuclein
著者Schweighauser, M, Shi, Y, Tarutani, A, Kametani, F, Murzin, A.G, Ghetti, B, Matsubara, T, Tomita, T, Ando, T, Hasegawa, K, Murayama, S, Yoshida, M, Hasegawa, M, Scheres, S.H.W, Goedert, M.
登録日2020-01-30
公開日2020-02-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Structures of alpha-synuclein filaments from multiple system atrophy.
Nature, 585, 2020
4KZJ
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Crystal Structure of TR3 LBD L449W Mutant
分子名称: GLYCEROL, Nuclear receptor subfamily 4 group A member 1
著者Li, F, Zhang, Q, Li, A, Tian, X, Cai, Q, Wang, W, Wang, Y, Chen, H, Xing, Y, Wu, Q, Lin, T.
登録日2013-05-30
公開日2013-12-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Orphan nuclear receptor TR3 acts in autophagic cell death via mitochondrial signaling pathway.
Nat.Chem.Biol., 10, 2014
8JGC
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Cryo-EM structure of Mi3 fused with LOV2
分子名称: LOV domain-containing protein,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
著者Zhang, H.W, Kang, W, Xue, C.
登録日2023-05-20
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Dynamic Metabolons Using Stimuli-Responsive Protein Cages.
J.Am.Chem.Soc., 146, 2024
6XWK
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Crystal structure of Phormidium rubidum phycocyanin
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IMIDAZOLE, ...
著者Sonani, R.R, Roszak, A.W, Cogdell, R.J, Madamwar, D, Liu, H, Gross, M.L, Blankenship, R.E.
登録日2020-01-23
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Revisiting high-resolution crystal structure of Phormidium rubidum phycocyanin.
Photosyn. Res., 144, 2020
8DM3
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Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab 4A8 heavy chain, ...
著者Zhu, X, Saville, J.W, Mannar, D, Berezuk, A.M, Cholak, S, Tuttle, K.S, Vahdatihassani, F, Subramaniam, S.
登録日2022-07-08
公開日2023-01-25
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献Structural analysis of receptor engagement and antigenic drift within the BA.2 spike protein.
Cell Rep, 42, 2023
6XY7
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Human SHIP1 with magnesium and phosphate bound to the active site
分子名称: DIMETHYL SULFOXIDE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Bradshaw, W.J, Scacioc, A, Fernandez-Cid, A, Mckinley, G, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O.
登録日2020-01-29
公開日2020-02-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.086 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 2024
1QQ5
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STRUCTURE OF L-2-HALOACID DEHALOGENASE FROM XANTHOBACTER AUTOTROPHICUS
分子名称: FORMIC ACID, PROTEIN (L-2-HALOACID DEHALOGENASE)
著者Ridder, I.S, Rozeboom, H.J, Kalk, K.H, Dijkstra, B.W.
登録日1999-06-10
公開日1999-10-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Crystal structures of intermediates in the dehalogenation of haloalkanoates by L-2-haloacid dehalogenase.
J.Biol.Chem., 274, 1999
5YQH
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BU of 5yqh by Molmil
The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
分子名称: 4-methoxybenzamide, CHLORIDE ION, Cytochrome P450, ...
著者Zhou, W, Zhang, T, Qiao, R, Bell, S, Coleman, T.
登録日2017-11-06
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
To Be Published
8E34
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BU of 8e34 by Molmil
CryoEM structures of bAE1 captured in multiple states
分子名称: Anion exchange protein
著者Zhekova, H.R, Wang, W.G, Jiang, J.S, Tsirulnikov, K, Muhammad-Khan, G.H, Azimov, R, Abuladze, N, Kao, L, Newman, D, Noskov, S.Y, Tieleman, P, Zhou, Z.H, Pushkin, A, Kurtz, I.
登録日2022-08-16
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献CryoEM structures of anion exchanger 1 capture multiple states of inward- and outward-facing conformations.
Commun Biol, 5, 2022
8DMK
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Cryo-EM reveals the molecular basis of laminin polymerization and LN-lamininopathies
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Laminin subunit alpha-1, ...
著者Kulczyk, A.W.
登録日2022-07-08
公開日2023-02-01
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM reveals the molecular basis oflaminin polymerization and LN-lamininopathies.
Nat Commun, 14, 2023
3SZ7
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BU of 3sz7 by Molmil
Crystal structure of the Sgt2 TPR domain from Aspergillus fumigatus
分子名称: Hsc70 cochaperone (SGT)
著者Chartron, J.W, Gonzalez, G.M, Clemons Jr, W.M.
登録日2011-07-18
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献A structural model of the Sgt2 protein and its interactions with chaperones and the Get4/Get5 complex.
J.Biol.Chem., 286, 2011
1QT4
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T26Q MUTANT OF T4 LYSOZYME
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, PROTEIN (T4 LYSOZYME)
著者Kuroki, R, Weaver, L.H, Matthews, B.W.
登録日1999-06-30
公開日1999-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of the conversion of T4 lysozyme into a transglycosidase by reengineering the active site.
Proc.Natl.Acad.Sci.USA, 96, 1999
6FNQ
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BU of 6fnq by Molmil
Ergothioneine-biosynthetic methyltransferase EgtD in complex with N,N,N-trimethylhistidine (hercynine)
分子名称: GLYCEROL, Histidine N-alpha-methyltransferase, MAGNESIUM ION, ...
著者Vit, A, Blankenfeldt, W, Seebeck, F.P.
登録日2018-02-05
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018
7OI3
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BU of 7oi3 by Molmil
Cryo-EM structure of the Cetacean morbillivirus nucleoprotein-RNA complex
分子名称: Cetacean morbillivirus nucleoprotein, poly-A 6-mer
著者Zinzula, L, Beck, F, Klumpe, S, Bohn, S, Pfeifer, G, Bollschweiler, D, Nagy, I, Plitzko, J.M, Baumeister, W.
登録日2021-05-11
公開日2021-06-23
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of the cetacean morbillivirus nucleoprotein-RNA complex.
J.Struct.Biol., 213, 2021
6FPL
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BU of 6fpl by Molmil
TETR(D) E147A MUTANT IN COMPLEX WITH TETRACYCLINE AND MAGNESIUM
分子名称: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
著者Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
登録日2018-02-11
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4PEG
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BU of 4peg by Molmil
Dbr1 in complex with guanosine-5'-monophosphate
分子名称: GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ...
著者Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J.
登録日2014-04-23
公開日2014-08-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1.
Nucleic Acids Res., 42, 2014
4MVA
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1.43 Angstrom Resolution Crystal Structure of Triosephosphate Isomerase (tpiA) from Escherichia coli in Complex with Acetyl Phosphate.
分子名称: 1,2-ETHANEDIOL, ACETYLPHOSPHATE, CHLORIDE ION, ...
著者Minasov, G, Kuhn, M.L, Dubrovska, I, Winsor, J, Shuvalova, L, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-09-23
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural, kinetic and proteomic characterization of acetyl phosphate-dependent bacterial protein acetylation.
Plos One, 9, 2014
6FSX
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BU of 6fsx by Molmil
The hit-and-return system enables efficient time-resolved serial synchrotron crystallography
分子名称: Fluoroacetate dehalogenase
著者Schulz, E.C, Mehrabi, P, Mueller-werkmeiser, H, Tellkamp, F, Jha, A, Stuart, W, Persch, E, De Gasparo, R, Diederich, F, Pai, E, Miller, D.
登録日2018-02-20
公開日2018-10-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The hit-and-return system enables efficient time-resolved serial synchrotron crystallography.
Nat. Methods, 15, 2018
4N7D
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BU of 4n7d by Molmil
Selenomethionine incorporated Bla g 4
分子名称: Bla g 4 allergen variant 1, CITRIC ACID, GLYCEROL
著者Offermann, L.R, Chan, S.L, Osinski, T, Tan, Y.W, Chew, F.T, Sivaraman, J, Mok, Y.K, Minor, W, Chruszcz, M.
登録日2013-10-15
公開日2014-05-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The major cockroach allergen Bla g 4 binds tyramine and octopamine.
Mol.Immunol., 60, 2014
8C6C
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Light SFX structure of D.m(6-4)photolyase at 300ps time delay
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
著者Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
登録日2023-01-11
公開日2023-11-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8C6H
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Light SFX structure of D.m(6-4)photolyase at 2ps time delay
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
著者Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
登録日2023-01-11
公開日2023-11-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
8C1U
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SFX structure of D.m(6-4)photolyase
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
著者Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
登録日2022-12-21
公開日2023-11-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024
6XK0
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Albumin-dexamethasone complex
分子名称: Albumin, CITRATE ANION, DEXAMETHASONE, ...
著者Czub, M.P, Majorek, K.A, Shabalin, I.G, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2020-06-24
公開日2020-07-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy.
Iucrj, 7, 2020
8C69
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Light SFX structure of D.m(6-4)photolyase at 100 microsecond time delay
分子名称: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
著者Cellini, A, Kumar, M, Nimmrich, A, Mutisya, J, Furrer, A, Beale, E.V, Carrillo, M, Malla, T.N, Maj, P, Dworkowskic, F, Cirelli, C, Ozerovi, D, Bacellar, C, Strandfuss, J, Weinert, T, Ihalainen, J.A, Yuan Wahlgren, W, Westenhoff, S.
登録日2023-01-11
公開日2023-11-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography.
Nat.Chem., 16, 2024

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