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PDB: 93 件

3IZZ
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BU of 3izz by Molmil
Models for ribosome components that are nearest neighbors to the bovine mitochondrial initiation factor2 bound to the E. Coli ribosome
分子名称: Helix 18 (Small Subunit), Helix 44 (Small Subunit), Helix 5, ...
著者Yassin, A.S, Haque, E, Datta, P.P, Elmore, K, Banavali, N.K, Spremulli, L.L, Agrawal, R.K.
登録日2011-01-20
公開日2011-03-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1.
Proc.Natl.Acad.Sci.USA, 108, 2011
2LF1
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BU of 2lf1 by Molmil
Solution structure of L. casei dihydrofolate reductase complexed with NADPH, 30 structures
分子名称: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Polshakov, V, Feeney, J, Birdsall, B, Kovalevskaya, N.
登録日2011-06-28
公開日2011-12-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR structures of apo L. casei dihydrofolate reductase and its complexes with trimethoprim and NADPH: contributions to positive cooperative binding from ligand-induced refolding, conformational changes, and interligand hydrophobic interactions
Biochemistry, 50, 2011
6WSM
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BU of 6wsm by Molmil
Crystal structure of coiled coil region of human septin 8
分子名称: SULFATE ION, Septin-8
著者Cabrejos, D.A.L, Cavini, I, Sala, F.A, Valadares, N.F, Pereira, H.M, Brandao-Neto, J, Nascimento, A.F.Z, Uson, I, Araujo, A.P.U, Garratt, R.C.
登録日2020-05-01
公開日2021-03-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.451 Å)
主引用文献Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.
J.Mol.Biol., 433, 2021
2N2Y
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BU of 2n2y by Molmil
Solution structure of the meiosis-expressed gene 1 (Meig1)
分子名称: Meiosis-expressed gene 1 protein
著者Williams Jr, D.C, Walavalkar, N.M, Buchwald, W.A.
登録日2015-05-16
公開日2016-01-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Dissecting the structural basis of MEIG1 interaction with PACRG.
Sci Rep, 6, 2016
2MOE
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BU of 2moe by Molmil
Solution structure of MBD4 methyl-cytosine binding domain bound to methylated DNA
分子名称: DNA (5'-D(*GP*AP*GP*CP*(5CM)P*GP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*TP*(5CM)P*GP*GP*CP*TP*C)-3'), Methyl-CpG-binding domain protein 4
著者Williams, D.C, Walavalkar, N.M.
登録日2014-04-24
公開日2014-09-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and intramolecular exchange of methyl-cytosine binding domain protein 4 (MBD4) on DNA suggests a mechanism to scan for mCpG/TpG mismatches.
Nucleic Acids Res., 42, 2015
1TOZ
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BU of 1toz by Molmil
NMR structure of the human NOTCH-1 ligand binding region
分子名称: Neurogenic locus notch homolog protein 1
著者Hambleton, S, Valeyev, N.Y, Muranyi, A, Knott, V, Werner, J.M, Mcmichael, A.J, Handford, P.A, Downing, A.K.
登録日2004-06-15
公開日2004-10-12
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Structural and functional properties of the human notch-1 ligand binding region
STRUCTURE, 12, 2004
1U5M
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BU of 1u5m by Molmil
Structure of a Chordin-like Cysteine-rich Repeat (VWC module) from Collagen IIA
分子名称: alpha 1 type II collagen isoform 1
著者O'Leary, J.M, Hamilton, J.m, Deane, C.M, Valeyev, N.V, Sandell, L.J, Downing, A.K.
登録日2004-07-28
公開日2004-10-05
最終更新日2021-10-20
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of a prototypical chordin-like cysteine-rich repeat (von Willebrand Factor type C module) from collagen IIA
J.Biol.Chem., 279, 2004
5W4C
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BU of 5w4c by Molmil
Crystal structure of thioredoxin reductase from Cryptococcus neoformans in complex with FAD (FO conformation)
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Bravo-Chaucanes, C.P, Valadares, N.F, Felipe, M.S.S, Barbosa, J.A.R.G.
登録日2017-06-09
公開日2018-06-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.255 Å)
主引用文献Crystal structure of thioredoxin reductase from Cryptococcus neoformans in complex with FAD (FO conformation)
To be published
6WCU
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BU of 6wcu by Molmil
Crystal structure of coiled coil region of human septin 5
分子名称: Septin-5
著者Cabrejos, D.A.L, Cavini, I, Sala, F.A, Valadares, N.F, Pereira, H.M, Brandao-Neto, J, Nascimento, A.F.Z, Uson, I, Araujo, A.P.U, Garratt, R.C.
登録日2020-03-31
公開日2021-03-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.
J.Mol.Biol., 433, 2021
8FR8
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BU of 8fr8 by Molmil
Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
分子名称: 16S rRNA (1511-MER), 23S rRNA (3119-MER), 30S ribosomal protein S10, ...
著者Majumdar, S, Sharma, M.R, Manjari, S.R, Banavali, N.K, Agrawal, R.K.
登録日2023-01-06
公開日2023-05-17
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Starvation sensing by mycobacterial RelA/SpoT homologue through constitutive surveillance of translation.
Proc.Natl.Acad.Sci.USA, 120, 2023
3SOP
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BU of 3sop by Molmil
Crystal Structure Of Human Septin 3 GTPase Domain
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Neuronal-specific septin-3
著者Marques, I.A, Macedo, J.N.A, Pereira, H.M, Valadares, N.F, Araujo, A.P.U, Garratt, R.C.
登録日2011-06-30
公開日2012-11-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.885 Å)
主引用文献The structure and properties of septin 3: a possible missing link in septin filament formation.
Biochem.J., 450, 2013
1SKM
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BU of 1skm by Molmil
HhaI methyltransferase in complex with DNA containing an abasic south carbocyclic sugar at its target site
分子名称: 5'-D(*T*GP*TP*CP*AP*GP*(HCX)P*GP*CP*AP*TP*GP*G)-3', 5'-D(*TP*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3', Modification methylase HhaI, ...
著者Horton, J.R, Ratner, G, Banavali, N, Huang, N, Marquez, V.E, MacKerell, A.D, Cheng, X.
登録日2004-03-05
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Caught in the act: visualization of an intermediate in the DNA base-flipping pathway induced by HhaI methyltransferase
Nucleic Acids Res., 32, 2004
6E5M
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BU of 6e5m by Molmil
Crystallographic structure of the cyclic nonapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 32 2 1
分子名称: 9MER-PEPTIDE, CALCIUM ION, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-07-20
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.612 Å)
主引用文献Crystallographic structure of a complex between trypsin and a nonapeptide derived from a Bowman-Birk inhibitor found in Vigna unguiculata seeds.
Arch. Biochem. Biophys., 665, 2019
6EAV
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BU of 6eav by Molmil
Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 4(1) 2(1) 2
分子名称: CALCIUM ION, CYS-THR-LYS, Cationic trypsin
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.391 Å)
主引用文献Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 4(1) 2(1) 2
To Be Published
6EAW
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BU of 6eaw by Molmil
Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
分子名称: CALCIUM ION, CYS-THR-LYS-SER-ILE, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.289 Å)
主引用文献Crystallographic structure of the cyclic heptapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
To Be Published
6EAX
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BU of 6eax by Molmil
Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
分子名称: CALCIUM ION, CYS-THR-LYS-SER-ILE-CYS, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.189 Å)
主引用文献Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
To Be Published
6EAU
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BU of 6eau by Molmil
Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
分子名称: CALCIUM ION, CYS-THR-LYS-SER-ILE-PRO-PRO-CYS, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
To Be Published
6T5J
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BU of 6t5j by Molmil
Structure of NUDT15 in complex with inhibitor TH1760
分子名称: 6-[4-(1~{H}-indol-5-ylcarbonyl)piperazin-1-yl]sulfonyl-3~{H}-1,3-benzoxazol-2-one, CHLORIDE ION, MAGNESIUM ION, ...
著者Carter, M, Rehling, D, Desroses, M, Zhang, S.M, Hagenkort, A, Valerie, N.C.K, Helleday, T, Stenmark, P.
登録日2019-10-16
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a chemical probe against NUDT15.
Nat.Chem.Biol., 16, 2020
5OEO
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BU of 5oeo by Molmil
Solution structure of the complex of TRPV5(655-725) with a Calmodulin E32Q/E68Q double mutant
分子名称: CALCIUM ION, Calmodulin-1, Transient receptor potential cation channel subfamily V member 5
著者Vuister, G.W, Bokhovchuk, F.M, Bate, N, Kovalevskaya, N, Goult, B.T, Spronk, C.A.E.M.
登録日2017-07-09
公開日2018-04-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Structural Basis of Calcium-Dependent Inactivation of the Transient Receptor Potential Vanilloid 5 Channel.
Biochemistry, 57, 2018
6EAT
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BU of 6eat by Molmil
Crystallographic structure of the cyclic nonapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
分子名称: 9MER-PEPTIDE, CALCIUM ION, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.149 Å)
主引用文献Crystallographic structure of a complex between trypsin and a nonapeptide derived from a Bowman-Birk inhibitor found in Vigna unguiculata seeds.
Arch. Biochem. Biophys., 665, 2019
8TVZ
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BU of 8tvz by Molmil
RNA origami 3-helix tile Traptamer
分子名称: RNA (363-MER)
著者McRae, E.K.S, Vallina, N.S, Andersen, E.S.
登録日2023-08-18
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (5.94 Å)
主引用文献An RNA origami robot that traps and releases a fluorescent aptamer.
Sci Adv, 10, 2024
6B7I
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BU of 6b7i by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with (2S)-2-(3,5-difluorophenyl)-2-hydroxyacetic acid
分子名称: (2S)-(3,5-difluorophenyl)(hydroxy)acetic acid, DIMETHYL SULFOXIDE, Purine nucleoside phosphorylase
著者Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
登録日2017-10-04
公開日2018-10-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with (2S)-2-(3,5-difluorophenyl)-2-hydroxyacetic acid
To Be Published
6B37
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BU of 6b37 by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 1,3-benzothiazol-2-ol
分子名称: 1,3-benzothiazol-2-ol, DIMETHYL SULFOXIDE, Purine nucleoside phosphorylase
著者Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
登録日2017-09-21
公開日2018-09-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 1,3-benzothiazol-2-ol
To Be Published
6B3L
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BU of 6b3l by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 2,3-dihydro-1H-inden-2-amine
分子名称: DIMETHYL SULFOXIDE, INDAN-2-AMINE, Purine nucleoside phosphorylase
著者Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
登録日2017-09-22
公開日2018-09-26
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 2,3-dihydro-1H-inden-2-amine
To Be Published
6BB7
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BU of 6bb7 by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 3-methyl-1,2-dihydropyridin-2-one
分子名称: 3-methylpyridin-2-ol, DIMETHYL SULFOXIDE, Purine nucleoside phosphorylase
著者Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
登録日2017-10-17
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 3-methylpyridin-1-ium-2-olate
To Be Published

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